EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000011847 (Gene tree)
Gene ID: 107096595
Gene Symbol: zmat3
Alias: zmp:0000000878
Full Name: zinc finger matrin-type 3
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 14946 bases
Position: chrKL653135.1:432401-447346
Accession: 107096595
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000009796	zf-met	PF12874.7	2e-23	1	3
ENSCVAP00000009796	zf-met	PF12874.7	2e-23	2	3
ENSCVAP00000009796	zf-met	PF12874.7	2e-23	3	3
ENSCVAP00000026343	zf-met	PF12874.7	1.4e-22	1	3
ENSCVAP00000026343	zf-met	PF12874.7	1.4e-22	2	3
ENSCVAP00000026343	zf-met	PF12874.7	1.4e-22	3	3
ENSCVAP00000009796	zf-C2H2_jaz	PF12171.8	2.7e-20	1	3
ENSCVAP00000009796	zf-C2H2_jaz	PF12171.8	2.7e-20	2	3
ENSCVAP00000009796	zf-C2H2_jaz	PF12171.8	2.7e-20	3	3
ENSCVAP00000026343	zf-C2H2_jaz	PF12171.8	1.5e-19	1	3
ENSCVAP00000026343	zf-C2H2_jaz	PF12171.8	1.5e-19	2	3
ENSCVAP00000026343	zf-C2H2_jaz	PF12171.8	1.5e-19	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000016332	-	1649	XM_015393326	ENSCVAP00000026343	493 (aa)	XP_015248812	UPI000742BA91
ENSCVAT00000029373	-	849	-	ENSCVAP00000009796	282 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000011847's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000011847's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000011847	zmat3	91	34.711	ENSCVAG00000000113	zmat4a	81	35.849

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000011847	zmat3	79	67.660	ENSG00000172667	ZMAT3	99	59.396	Homo_sapiens
ENSCVAG00000011847	zmat3	100	84.615	ENSAPOG00000015037	zmat3	100	84.242	Acanthochromis_polyacanthus
ENSCVAG00000011847	zmat3	99	59.396	ENSAMEG00000010742	ZMAT3	99	59.396	Ailuropoda_melanoleuca
ENSCVAG00000011847	zmat3	100	80.282	ENSACIG00000023037	zmat3	99	86.056	Amphilophus_citrinellus
ENSCVAG00000011847	zmat3	100	84.615	ENSAOCG00000017955	zmat3	100	92.857	Amphiprion_ocellaris
ENSCVAG00000011847	zmat3	95	80.952	ENSAPEG00000014553	zmat3	96	83.871	Amphiprion_percula
ENSCVAG00000011847	zmat3	93	79.851	ENSATEG00000022244	zmat3	98	80.427	Anabas_testudineus
ENSCVAG00000011847	zmat3	99	59.794	ENSAPLG00000013292	ZMAT3	96	59.794	Anas_platyrhynchos
ENSCVAG00000011847	zmat3	95	60.573	ENSACAG00000005005	ZMAT3	99	58.389	Anolis_carolinensis
ENSCVAG00000011847	zmat3	93	58.719	ENSANAG00000035673	ZMAT3	96	58.719	Aotus_nancymaae
ENSCVAG00000011847	zmat3	100	82.696	ENSACLG00000026272	zmat3	100	85.000	Astatotilapia_calliptera
ENSCVAG00000011847	zmat3	96	63.312	ENSAMXG00000009798	zmat3	100	66.316	Astyanax_mexicanus
ENSCVAG00000011847	zmat3	93	62.044	ENSBTAG00000012463	ZMAT3	99	60.067	Bos_taurus
ENSCVAG00000011847	zmat3	95	61.538	ENSCJAG00000013399	ZMAT3	97	61.111	Callithrix_jacchus
ENSCVAG00000011847	zmat3	99	59.396	ENSCAFG00000011081	ZMAT3	99	59.396	Canis_familiaris
ENSCVAG00000011847	zmat3	99	59.396	ENSCAFG00020023107	ZMAT3	99	59.396	Canis_lupus_dingo
ENSCVAG00000011847	zmat3	79	68.966	ENSCHIG00000025074	ZMAT3	99	60.000	Capra_hircus
ENSCVAG00000011847	zmat3	99	59.333	ENSTSYG00000026546	ZMAT3	99	60.738	Carlito_syrichta
ENSCVAG00000011847	zmat3	99	60.403	ENSCAPG00000014645	ZMAT3	99	60.403	Cavia_aperea
ENSCVAG00000011847	zmat3	99	60.403	ENSCPOG00000003865	ZMAT3	99	60.403	Cavia_porcellus
ENSCVAG00000011847	zmat3	95	61.754	ENSCCAG00000036721	ZMAT3	97	61.324	Cebus_capucinus
ENSCVAG00000011847	zmat3	98	57.143	ENSCATG00000025137	ZMAT3	98	57.143	Cercocebus_atys
ENSCVAG00000011847	zmat3	99	60.738	ENSCLAG00000013464	ZMAT3	99	60.738	Chinchilla_lanigera
ENSCVAG00000011847	zmat3	80	67.227	ENSCSAG00000012935	ZMAT3	99	59.396	Chlorocebus_sabaeus
ENSCVAG00000011847	zmat3	79	69.362	ENSCHOG00000005591	ZMAT3	97	60.627	Choloepus_hoffmanni
ENSCVAG00000011847	zmat3	97	57.951	ENSCPBG00000026917	ZMAT3	93	57.951	Chrysemys_picta_bellii
ENSCVAG00000011847	zmat3	80	67.227	ENSCANG00000029476	ZMAT3	99	59.396	Colobus_angolensis_palliatus
ENSCVAG00000011847	zmat3	99	59.866	ENSCGRG00001012339	Zmat3	99	59.866	Cricetulus_griseus_chok1gshd
ENSCVAG00000011847	zmat3	99	59.866	ENSCGRG00000011491	Zmat3	99	59.866	Cricetulus_griseus_crigri
ENSCVAG00000011847	zmat3	99	73.347	ENSCSEG00000019463	zmat3	99	73.347	Cynoglossus_semilaevis
ENSCVAG00000011847	zmat3	96	60.656	ENSDARG00000080021	zmat3	100	68.421	Danio_rerio
ENSCVAG00000011847	zmat3	95	60.791	ENSDNOG00000012284	ZMAT3	99	60.465	Dasypus_novemcinctus
ENSCVAG00000011847	zmat3	79	68.085	ENSDORG00000011801	Zmat3	99	60.333	Dipodomys_ordii
ENSCVAG00000011847	zmat3	95	50.813	ENSETEG00000008883	ZMAT3	100	50.813	Echinops_telfairi
ENSCVAG00000011847	zmat3	87	63.985	ENSEASG00005016887	ZMAT3	99	59.060	Equus_asinus_asinus
ENSCVAG00000011847	zmat3	87	63.985	ENSECAG00000012784	ZMAT3	99	59.060	Equus_caballus
ENSCVAG00000011847	zmat3	99	53.289	ENSEEUG00000001126	ZMAT3	99	53.289	Erinaceus_europaeus
ENSCVAG00000011847	zmat3	87	68.561	ENSELUG00000010132	zmat3	90	71.321	Esox_lucius
ENSCVAG00000011847	zmat3	99	58.725	ENSFCAG00000014578	ZMAT3	99	58.725	Felis_catus
ENSCVAG00000011847	zmat3	96	59.075	ENSFALG00000008403	ZMAT3	93	59.075	Ficedula_albicollis
ENSCVAG00000011847	zmat3	99	60.403	ENSFDAG00000013376	ZMAT3	99	60.403	Fukomys_damarensis
ENSCVAG00000011847	zmat3	100	84.932	ENSFHEG00000003221	zmat3	100	94.444	Fundulus_heteroclitus
ENSCVAG00000011847	zmat3	84	75.510	ENSGMOG00000008558	zmat3	100	75.510	Gadus_morhua
ENSCVAG00000011847	zmat3	96	59.431	ENSGALG00000040948	ZMAT3	98	62.308	Gallus_gallus
ENSCVAG00000011847	zmat3	50	88.276	ENSGAFG00000010485	zmat3	52	88.276	Gambusia_affinis
ENSCVAG00000011847	zmat3	89	79.468	ENSGACG00000006175	zmat3	98	82.890	Gasterosteus_aculeatus
ENSCVAG00000011847	zmat3	97	58.657	ENSGAGG00000009275	ZMAT3	93	58.657	Gopherus_agassizii
ENSCVAG00000011847	zmat3	79	67.660	ENSGGOG00000009975	ZMAT3	99	59.396	Gorilla_gorilla
ENSCVAG00000011847	zmat3	100	85.211	ENSHBUG00000004401	zmat3	100	85.211	Haplochromis_burtoni
ENSCVAG00000011847	zmat3	99	61.953	ENSHGLG00000011523	ZMAT3	99	61.953	Heterocephalus_glaber_female
ENSCVAG00000011847	zmat3	99	61.953	ENSHGLG00100012235	ZMAT3	99	61.953	Heterocephalus_glaber_male
ENSCVAG00000011847	zmat3	94	75.094	ENSHCOG00000010624	zmat3	100	69.501	Hippocampus_comes
ENSCVAG00000011847	zmat3	96	58.521	ENSIPUG00000003043	zmat3	89	66.926	Ictalurus_punctatus
ENSCVAG00000011847	zmat3	79	67.660	ENSSTOG00000028436	ZMAT3	99	59.060	Ictidomys_tridecemlineatus
ENSCVAG00000011847	zmat3	78	69.264	ENSJJAG00000004288	Zmat3	99	60.811	Jaculus_jaculus
ENSCVAG00000011847	zmat3	100	87.179	ENSKMAG00000008962	zmat3	100	87.449	Kryptolebias_marmoratus
ENSCVAG00000011847	zmat3	100	79.322	ENSLBEG00000001993	zmat3	100	85.115	Labrus_bergylta
ENSCVAG00000011847	zmat3	99	52.366	ENSLACG00000015780	ZMAT3	87	52.366	Latimeria_chalumnae
ENSCVAG00000011847	zmat3	84	67.969	ENSLOCG00000001108	zmat3	100	65.035	Lepisosteus_oculatus
ENSCVAG00000011847	zmat3	78	69.264	ENSLAFG00000000897	ZMAT3	99	60.204	Loxodonta_africana
ENSCVAG00000011847	zmat3	95	57.090	ENSMFAG00000021292	ZMAT3	99	60.000	Macaca_fascicularis
ENSCVAG00000011847	zmat3	80	67.227	ENSMMUG00000003216	ZMAT3	99	60.000	Macaca_mulatta
ENSCVAG00000011847	zmat3	95	57.090	ENSMNEG00000036725	ZMAT3	99	59.396	Macaca_nemestrina
ENSCVAG00000011847	zmat3	98	60.345	ENSMLEG00000026279	ZMAT3	98	60.345	Mandrillus_leucophaeus
ENSCVAG00000011847	zmat3	100	84.211	ENSMAMG00000012349	zmat3	100	82.734	Mastacembelus_armatus
ENSCVAG00000011847	zmat3	100	82.007	ENSMZEG00005015427	zmat3	100	85.259	Maylandia_zebra
ENSCVAG00000011847	zmat3	96	59.431	ENSMGAG00000009873	ZMAT3	93	59.431	Meleagris_gallopavo
ENSCVAG00000011847	zmat3	99	57.718	ENSMAUG00000001986	Zmat3	99	57.718	Mesocricetus_auratus
ENSCVAG00000011847	zmat3	99	60.067	ENSMICG00000049501	ZMAT3	99	60.067	Microcebus_murinus
ENSCVAG00000011847	zmat3	78	68.559	ENSMOCG00000018844	Zmat3	78	68.559	Microtus_ochrogaster
ENSCVAG00000011847	zmat3	100	69.716	ENSMMOG00000001603	zmat3	100	76.923	Mola_mola
ENSCVAG00000011847	zmat3	96	56.338	ENSMODG00000021308	ZMAT3	94	56.690	Monodelphis_domestica
ENSCVAG00000011847	zmat3	100	82.051	ENSMALG00000019683	zmat3	100	78.873	Monopterus_albus
ENSCVAG00000011847	zmat3	78	67.241	MGP_CAROLIEiJ_G0024914	Zmat3	78	67.241	Mus_caroli
ENSCVAG00000011847	zmat3	78	67.241	ENSMUSG00000027663	Zmat3	78	67.241	Mus_musculus
ENSCVAG00000011847	zmat3	78	65.801	MGP_PahariEiJ_G0026359	Zmat3	78	65.801	Mus_pahari
ENSCVAG00000011847	zmat3	78	67.241	MGP_SPRETEiJ_G0025848	Zmat3	78	67.241	Mus_spretus
ENSCVAG00000011847	zmat3	99	58.389	ENSMPUG00000017206	ZMAT3	99	58.389	Mustela_putorius_furo
ENSCVAG00000011847	zmat3	99	58.054	ENSMLUG00000013074	ZMAT3	99	58.054	Myotis_lucifugus
ENSCVAG00000011847	zmat3	78	68.831	ENSNGAG00000023602	Zmat3	80	68.085	Nannospalax_galili
ENSCVAG00000011847	zmat3	100	85.211	ENSNBRG00000020886	zmat3	100	85.211	Neolamprologus_brichardi
ENSCVAG00000011847	zmat3	87	63.985	ENSNLEG00000005658	ZMAT3	99	59.396	Nomascus_leucogenys
ENSCVAG00000011847	zmat3	98	58.741	ENSMEUG00000015724	ZMAT3	79	66.524	Notamacropus_eugenii
ENSCVAG00000011847	zmat3	99	60.067	ENSODEG00000003313	ZMAT3	99	60.067	Octodon_degus
ENSCVAG00000011847	zmat3	99	76.333	ENSONIG00000008388	zmat3	99	77.483	Oreochromis_niloticus
ENSCVAG00000011847	zmat3	91	52.294	ENSOANG00000009901	ZMAT3	82	51.389	Ornithorhynchus_anatinus
ENSCVAG00000011847	zmat3	79	66.524	ENSOCUG00000004658	ZMAT3	99	57.667	Oryctolagus_cuniculus
ENSCVAG00000011847	zmat3	100	76.908	ENSORLG00000011575	zmat3	100	77.062	Oryzias_latipes
ENSCVAG00000011847	zmat3	100	76.707	ENSORLG00020005858	zmat3	100	76.861	Oryzias_latipes_hni
ENSCVAG00000011847	zmat3	99	81.853	ENSORLG00015003707	zmat3	100	77.062	Oryzias_latipes_hsok
ENSCVAG00000011847	zmat3	100	77.912	ENSOMEG00000011303	zmat3	100	78.068	Oryzias_melastigma
ENSCVAG00000011847	zmat3	79	67.234	ENSOGAG00000003252	ZMAT3	99	59.732	Otolemur_garnettii
ENSCVAG00000011847	zmat3	79	68.085	ENSOARG00000020713	ZMAT3	99	59.732	Ovis_aries
ENSCVAG00000011847	zmat3	79	67.660	ENSPPAG00000035483	ZMAT3	99	59.396	Pan_paniscus
ENSCVAG00000011847	zmat3	99	59.060	ENSPPRG00000004407	ZMAT3	99	59.060	Panthera_pardus
ENSCVAG00000011847	zmat3	99	59.060	ENSPTIG00000009929	ZMAT3	99	59.060	Panthera_tigris_altaica
ENSCVAG00000011847	zmat3	79	67.660	ENSPTRG00000015641	ZMAT3	99	59.396	Pan_troglodytes
ENSCVAG00000011847	zmat3	98	60.345	ENSPANG00000023167	ZMAT3	98	60.345	Papio_anubis
ENSCVAG00000011847	zmat3	96	61.386	ENSPKIG00000023370	zmat3	100	70.000	Paramormyrops_kingsleyae
ENSCVAG00000011847	zmat3	97	58.451	ENSPSIG00000014839	ZMAT3	93	58.451	Pelodiscus_sinensis
ENSCVAG00000011847	zmat3	92	70.000	ENSPMGG00000023924	zmat3	99	70.000	Periophthalmus_magnuspinnatus
ENSCVAG00000011847	zmat3	99	58.446	ENSPEMG00000019154	Zmat3	99	58.446	Peromyscus_maniculatus_bairdii
ENSCVAG00000011847	zmat3	97	69.725	ENSPFOG00000019206	zmat3	84	88.000	Poecilia_formosa
ENSCVAG00000011847	zmat3	100	85.017	ENSPLAG00000022572	zmat3	100	90.476	Poecilia_latipinna
ENSCVAG00000011847	zmat3	100	80.496	ENSPMEG00000004131	-	100	87.179	Poecilia_mexicana
ENSCVAG00000011847	zmat3	100	87.179	ENSPREG00000022632	zmat3	99	96.875	Poecilia_reticulata
ENSCVAG00000011847	zmat3	79	68.511	ENSPPYG00000014315	ZMAT3	99	60.067	Pongo_abelii
ENSCVAG00000011847	zmat3	99	57.860	ENSPCAG00000008585	ZMAT3	99	58.389	Procavia_capensis
ENSCVAG00000011847	zmat3	99	60.738	ENSPCOG00000022835	ZMAT3	99	60.738	Propithecus_coquereli
ENSCVAG00000011847	zmat3	95	59.649	ENSPVAG00000004489	ZMAT3	96	59.649	Pteropus_vampyrus
ENSCVAG00000011847	zmat3	100	85.211	ENSPNYG00000014350	zmat3	100	85.211	Pundamilia_nyererei
ENSCVAG00000011847	zmat3	99	61.162	ENSPNAG00000015664	zmat3	100	63.036	Pygocentrus_nattereri
ENSCVAG00000011847	zmat3	78	67.965	ENSRNOG00000010119	Zmat3	78	67.965	Rattus_norvegicus
ENSCVAG00000011847	zmat3	80	67.227	ENSRBIG00000029622	ZMAT3	96	60.351	Rhinopithecus_bieti
ENSCVAG00000011847	zmat3	80	67.227	ENSRROG00000038345	ZMAT3	96	60.351	Rhinopithecus_roxellana
ENSCVAG00000011847	zmat3	95	60.072	ENSSBOG00000033332	ZMAT3	97	60.764	Saimiri_boliviensis_boliviensis
ENSCVAG00000011847	zmat3	99	57.770	ENSSHAG00000016154	ZMAT3	99	56.623	Sarcophilus_harrisii
ENSCVAG00000011847	zmat3	96	63.699	ENSSFOG00015006984	zmat3	100	64.041	Scleropages_formosus
ENSCVAG00000011847	zmat3	100	82.051	ENSSMAG00000019540	-	99	79.605	Scophthalmus_maximus
ENSCVAG00000011847	zmat3	100	68.060	ENSSDUG00000016188	zmat3	100	80.952	Seriola_dumerili
ENSCVAG00000011847	zmat3	100	84.615	ENSSLDG00000018611	zmat3	99	82.520	Seriola_lalandi_dorsalis
ENSCVAG00000011847	zmat3	68	53.695	ENSSARG00000004901	ZMAT3	97	53.394	Sorex_araneus
ENSCVAG00000011847	zmat3	84	62.992	ENSSPUG00000014753	ZMAT3	96	60.854	Sphenodon_punctatus
ENSCVAG00000011847	zmat3	97	79.856	ENSSPAG00000011062	zmat3	100	82.424	Stegastes_partitus
ENSCVAG00000011847	zmat3	99	60.133	ENSSSCG00000033860	ZMAT3	99	60.133	Sus_scrofa
ENSCVAG00000011847	zmat3	96	59.075	ENSTGUG00000010765	-	93	59.075	Taeniopygia_guttata
ENSCVAG00000011847	zmat3	82	85.232	ENSTRUG00000004788	zmat3	96	77.338	Takifugu_rubripes
ENSCVAG00000011847	zmat3	86	80.469	ENSTNIG00000006781	zmat3	97	80.357	Tetraodon_nigroviridis
ENSCVAG00000011847	zmat3	64	72.368	ENSTBEG00000012359	ZMAT3	94	72.368	Tupaia_belangeri
ENSCVAG00000011847	zmat3	79	65.385	ENSTTRG00000004923	ZMAT3	99	57.239	Tursiops_truncatus
ENSCVAG00000011847	zmat3	99	58.725	ENSUAMG00000007623	ZMAT3	99	58.725	Ursus_americanus
ENSCVAG00000011847	zmat3	99	58.725	ENSUMAG00000007847	ZMAT3	99	58.725	Ursus_maritimus
ENSCVAG00000011847	zmat3	79	67.234	ENSVPAG00000006611	ZMAT3	99	58.725	Vicugna_pacos
ENSCVAG00000011847	zmat3	99	59.060	ENSVVUG00000004729	ZMAT3	99	59.060	Vulpes_vulpes
ENSCVAG00000011847	zmat3	94	55.245	ENSXETG00000007251	zmat3	97	55.245	Xenopus_tropicalis
ENSCVAG00000011847	zmat3	100	80.836	ENSXCOG00000008397	zmat3	100	80.836	Xiphophorus_couchianus
ENSCVAG00000011847	zmat3	100	84.413	ENSXMAG00000015188	zmat3	100	85.425	Xiphophorus_maculatus