EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000011886 (Gene tree)
Gene ID: 107084278
Gene Symbol: trmt1
Alias: im:7150454
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 13982 bases
Position: chrKL652596.1:196932-210913
Accession: 107084278
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000009856	zf-CCCH	PF00642.24	0.00013	1	1
ENSCVAP00000009856	TRM	PF02005.16	4.1e-140	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000016397	-	2406	XM_015374056	ENSCVAP00000009856	656 (aa)	XP_015229542	UPI0007426689

Gene Model

Click here to download ENSCVAG00000011886's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000011886's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000011886	trmt1	89	66.169	ENSG00000104907	TRMT1	100	75.521	Homo_sapiens
ENSCVAG00000011886	trmt1	96	62.090	ENSAMEG00000012598	TRMT1	94	62.090	Ailuropoda_melanoleuca
ENSCVAG00000011886	trmt1	93	76.699	ENSACIG00000018680	trmt1	97	76.699	Amphilophus_citrinellus
ENSCVAG00000011886	trmt1	100	81.024	ENSAOCG00000006781	trmt1	100	81.024	Amphiprion_ocellaris
ENSCVAG00000011886	trmt1	100	81.024	ENSAPEG00000007712	trmt1	100	81.024	Amphiprion_percula
ENSCVAG00000011886	trmt1	100	79.552	ENSATEG00000001872	trmt1	100	79.552	Anabas_testudineus
ENSCVAG00000011886	trmt1	87	66.954	ENSACAG00000003825	TRMT1	94	66.954	Anolis_carolinensis
ENSCVAG00000011886	trmt1	85	66.259	ENSANAG00000023016	TRMT1	92	66.259	Aotus_nancymaae
ENSCVAG00000011886	trmt1	93	81.848	ENSACLG00000010073	trmt1	96	84.327	Astatotilapia_calliptera
ENSCVAG00000011886	trmt1	93	76.414	ENSAMXG00000012026	trmt1	93	76.414	Astyanax_mexicanus
ENSCVAG00000011886	trmt1	88	66.107	ENSBTAG00000019325	TRMT1	84	66.107	Bos_taurus
ENSCVAG00000011886	trmt1	78	41.366	WBGene00006613	trm-1	94	41.366	Caenorhabditis_elegans
ENSCVAG00000011886	trmt1	85	64.808	ENSCJAG00000004566	TRMT1	88	64.808	Callithrix_jacchus
ENSCVAG00000011886	trmt1	89	65.947	ENSCAFG00000017070	TRMT1	94	65.947	Canis_familiaris
ENSCVAG00000011886	trmt1	89	65.724	ENSCAFG00020005397	TRMT1	90	66.384	Canis_lupus_dingo
ENSCVAG00000011886	trmt1	88	66.164	ENSCHIG00000013569	TRMT1	89	66.164	Capra_hircus
ENSCVAG00000011886	trmt1	85	64.460	ENSTSYG00000003207	TRMT1	87	64.460	Carlito_syrichta
ENSCVAG00000011886	trmt1	80	63.277	ENSCAPG00000003355	TRMT1	94	63.277	Cavia_aperea
ENSCVAG00000011886	trmt1	88	65.870	ENSCPOG00000011754	TRMT1	88	65.870	Cavia_porcellus
ENSCVAG00000011886	trmt1	87	64.274	ENSCCAG00000022263	TRMT1	92	65.035	Cebus_capucinus
ENSCVAG00000011886	trmt1	69	56.277	ENSCATG00000038220	-	83	56.277	Cercocebus_atys
ENSCVAG00000011886	trmt1	89	66.000	ENSCATG00000039850	TRMT1	90	66.000	Cercocebus_atys
ENSCVAG00000011886	trmt1	86	67.133	ENSCLAG00000015295	TRMT1	89	64.799	Chinchilla_lanigera
ENSCVAG00000011886	trmt1	75	68.191	ENSCSAG00000006500	TRMT1	95	68.191	Chlorocebus_sabaeus
ENSCVAG00000011886	trmt1	85	71.020	ENSCPBG00000023866	TRMT1	84	71.020	Chrysemys_picta_bellii
ENSCVAG00000011886	trmt1	83	48.750	ENSCING00000002884	-	98	48.750	Ciona_intestinalis
ENSCVAG00000011886	trmt1	82	50.926	ENSCSAVG00000010927	-	100	49.536	Ciona_savignyi
ENSCVAG00000011886	trmt1	82	53.176	ENSCANG00000031650	-	86	53.176	Colobus_angolensis_palliatus
ENSCVAG00000011886	trmt1	89	52.413	ENSCANG00000040631	TRMT1	91	52.413	Colobus_angolensis_palliatus
ENSCVAG00000011886	trmt1	85	67.135	ENSCGRG00001022594	Trmt1	87	67.135	Cricetulus_griseus_chok1gshd
ENSCVAG00000011886	trmt1	85	67.135	ENSCGRG00000017732	Trmt1	86	67.135	Cricetulus_griseus_crigri
ENSCVAG00000011886	trmt1	100	76.339	ENSCSEG00000001643	trmt1	100	76.339	Cynoglossus_semilaevis
ENSCVAG00000011886	trmt1	94	75.040	ENSDARG00000010978	trmt1	93	75.199	Danio_rerio
ENSCVAG00000011886	trmt1	77	45.698	ENSDNOG00000048240	-	89	45.698	Dasypus_novemcinctus
ENSCVAG00000011886	trmt1	85	65.499	ENSDORG00000014298	Trmt1	86	65.499	Dipodomys_ordii
ENSCVAG00000011886	trmt1	83	47.153	FBgn0032430	CG6388	94	47.153	Drosophila_melanogaster
ENSCVAG00000011886	trmt1	79	51.346	ENSEBUG00000003449	trmt1	77	51.625	Eptatretus_burgeri
ENSCVAG00000011886	trmt1	85	67.075	ENSEASG00005004050	TRMT1	90	67.075	Equus_asinus_asinus
ENSCVAG00000011886	trmt1	85	67.250	ENSECAG00000016149	TRMT1	90	67.250	Equus_caballus
ENSCVAG00000011886	trmt1	60	57.468	ENSEEUG00000014102	-	100	57.468	Erinaceus_europaeus
ENSCVAG00000011886	trmt1	87	77.816	ENSELUG00000021659	trmt1	86	77.816	Esox_lucius
ENSCVAG00000011886	trmt1	87	65.925	ENSFCAG00000000483	TRMT1	88	65.925	Felis_catus
ENSCVAG00000011886	trmt1	86	67.133	ENSFDAG00000007386	TRMT1	87	67.133	Fukomys_damarensis
ENSCVAG00000011886	trmt1	91	87.625	ENSFHEG00000012865	trmt1	100	87.625	Fundulus_heteroclitus
ENSCVAG00000011886	trmt1	86	73.768	ENSGMOG00000006564	trmt1	99	74.517	Gadus_morhua
ENSCVAG00000011886	trmt1	100	84.802	ENSGAFG00000011862	trmt1	100	84.802	Gambusia_affinis
ENSCVAG00000011886	trmt1	94	76.661	ENSGACG00000000227	trmt1	98	77.508	Gasterosteus_aculeatus
ENSCVAG00000011886	trmt1	89	67.731	ENSGAGG00000016432	TRMT1	89	67.731	Gopherus_agassizii
ENSCVAG00000011886	trmt1	89	66.667	ENSGGOG00000014007	TRMT1	90	66.667	Gorilla_gorilla
ENSCVAG00000011886	trmt1	83	77.413	ENSHBUG00000008821	trmt1	92	77.413	Haplochromis_burtoni
ENSCVAG00000011886	trmt1	86	66.958	ENSHGLG00000015972	TRMT1	87	66.958	Heterocephalus_glaber_female
ENSCVAG00000011886	trmt1	86	62.369	ENSHGLG00100018112	TRMT1	87	62.369	Heterocephalus_glaber_male
ENSCVAG00000011886	trmt1	92	79.242	ENSHCOG00000009447	trmt1	95	79.242	Hippocampus_comes
ENSCVAG00000011886	trmt1	87	76.068	ENSIPUG00000002899	trmt1	86	75.897	Ictalurus_punctatus
ENSCVAG00000011886	trmt1	85	67.018	ENSSTOG00000012531	TRMT1	87	67.018	Ictidomys_tridecemlineatus
ENSCVAG00000011886	trmt1	89	63.880	ENSJJAG00000017154	Trmt1	92	63.306	Jaculus_jaculus
ENSCVAG00000011886	trmt1	99	83.511	ENSKMAG00000011809	trmt1	99	86.007	Kryptolebias_marmoratus
ENSCVAG00000011886	trmt1	100	76.900	ENSLBEG00000012703	trmt1	100	77.198	Labrus_bergylta
ENSCVAG00000011886	trmt1	86	61.014	ENSLACG00000014585	TRMT1	96	60.377	Latimeria_chalumnae
ENSCVAG00000011886	trmt1	88	69.565	ENSLOCG00000006479	trmt1	99	69.565	Lepisosteus_oculatus
ENSCVAG00000011886	trmt1	92	64.610	ENSLAFG00000014072	TRMT1	93	64.610	Loxodonta_africana
ENSCVAG00000011886	trmt1	89	66.000	ENSMFAG00000033143	TRMT1	90	66.000	Macaca_fascicularis
ENSCVAG00000011886	trmt1	89	61.436	ENSMMUG00000001167	TRMT1	91	61.436	Macaca_mulatta
ENSCVAG00000011886	trmt1	89	66.000	ENSMNEG00000037867	TRMT1	90	66.000	Macaca_nemestrina
ENSCVAG00000011886	trmt1	89	65.833	ENSMLEG00000016142	TRMT1	91	65.833	Mandrillus_leucophaeus
ENSCVAG00000011886	trmt1	99	80.392	ENSMAMG00000004357	trmt1	99	80.392	Mastacembelus_armatus
ENSCVAG00000011886	trmt1	100	78.971	ENSMZEG00005014510	trmt1	100	78.971	Maylandia_zebra
ENSCVAG00000011886	trmt1	89	65.050	ENSMAUG00000011134	Trmt1	90	65.050	Mesocricetus_auratus
ENSCVAG00000011886	trmt1	85	67.951	ENSMICG00000000793	TRMT1	86	67.951	Microcebus_murinus
ENSCVAG00000011886	trmt1	85	66.667	ENSMOCG00000015895	Trmt1	86	66.667	Microtus_ochrogaster
ENSCVAG00000011886	trmt1	94	80.551	ENSMMOG00000011097	trmt1	99	80.551	Mola_mola
ENSCVAG00000011886	trmt1	88	68.048	ENSMODG00000011619	TRMT1	94	68.048	Monodelphis_domestica
ENSCVAG00000011886	trmt1	89	65.167	MGP_CAROLIEiJ_G0031304	Trmt1	91	65.167	Mus_caroli
ENSCVAG00000011886	trmt1	89	65.333	ENSMUSG00000001909	Trmt1	91	65.333	Mus_musculus
ENSCVAG00000011886	trmt1	89	64.667	MGP_SPRETEiJ_G0032422	Trmt1	91	64.667	Mus_spretus
ENSCVAG00000011886	trmt1	96	62.348	ENSMPUG00000004210	TRMT1	94	62.348	Mustela_putorius_furo
ENSCVAG00000011886	trmt1	86	67.888	ENSMLUG00000012809	TRMT1	85	67.888	Myotis_lucifugus
ENSCVAG00000011886	trmt1	89	65.275	ENSNGAG00000022486	Trmt1	90	65.275	Nannospalax_galili
ENSCVAG00000011886	trmt1	76	89.412	ENSNBRG00000024376	trmt1	87	89.412	Neolamprologus_brichardi
ENSCVAG00000011886	trmt1	75	62.264	ENSNLEG00000013019	-	93	62.264	Nomascus_leucogenys
ENSCVAG00000011886	trmt1	86	67.483	ENSMEUG00000013756	TRMT1	97	67.483	Notamacropus_eugenii
ENSCVAG00000011886	trmt1	71	69.976	ENSOPRG00000009471	-	72	69.976	Ochotona_princeps
ENSCVAG00000011886	trmt1	86	67.188	ENSODEG00000010323	TRMT1	87	67.188	Octodon_degus
ENSCVAG00000011886	trmt1	100	82.451	ENSONIG00000000400	trmt1	100	82.451	Oreochromis_niloticus
ENSCVAG00000011886	trmt1	75	69.461	ENSOCUG00000021934	TRMT1	94	69.461	Oryctolagus_cuniculus
ENSCVAG00000011886	trmt1	98	75.000	ENSORLG00000020074	trmt1	97	78.282	Oryzias_latipes
ENSCVAG00000011886	trmt1	98	79.535	ENSORLG00020007561	trmt1	98	80.906	Oryzias_latipes_hni
ENSCVAG00000011886	trmt1	98	79.380	ENSORLG00015006547	trmt1	99	79.380	Oryzias_latipes_hsok
ENSCVAG00000011886	trmt1	98	79.690	ENSOMEG00000019343	trmt1	99	79.690	Oryzias_melastigma
ENSCVAG00000011886	trmt1	87	66.895	ENSOGAG00000025576	TRMT1	91	66.952	Otolemur_garnettii
ENSCVAG00000011886	trmt1	88	52.922	ENSOARG00000009397	TRMT1	83	52.922	Ovis_aries
ENSCVAG00000011886	trmt1	87	59.348	ENSPPRG00000012117	TRMT1	89	60.034	Panthera_pardus
ENSCVAG00000011886	trmt1	65	67.820	ENSPTIG00000008833	TRMT1	84	67.820	Panthera_tigris_altaica
ENSCVAG00000011886	trmt1	93	64.115	ENSPTRG00000010557	TRMT1	91	66.169	Pan_troglodytes
ENSCVAG00000011886	trmt1	83	49.559	ENSPTRG00000050421	-	89	49.559	Pan_troglodytes
ENSCVAG00000011886	trmt1	82	49.816	ENSPANG00000034058	-	85	49.816	Papio_anubis
ENSCVAG00000011886	trmt1	89	66.000	ENSPANG00000009247	TRMT1	91	66.000	Papio_anubis
ENSCVAG00000011886	trmt1	100	72.578	ENSPKIG00000005309	trmt1	100	72.578	Paramormyrops_kingsleyae
ENSCVAG00000011886	trmt1	84	59.025	ENSPSIG00000008762	TRMT1	81	58.467	Pelodiscus_sinensis
ENSCVAG00000011886	trmt1	92	79.801	ENSPMGG00000019764	trmt1	91	83.480	Periophthalmus_magnuspinnatus
ENSCVAG00000011886	trmt1	85	67.601	ENSPEMG00000016247	Trmt1	86	67.601	Peromyscus_maniculatus_bairdii
ENSCVAG00000011886	trmt1	86	64.476	ENSPMAG00000004329	trmt1	90	64.476	Petromyzon_marinus
ENSCVAG00000011886	trmt1	92	66.116	ENSPCIG00000019273	TRMT1	93	66.116	Phascolarctos_cinereus
ENSCVAG00000011886	trmt1	100	84.954	ENSPFOG00000008527	trmt1	100	84.954	Poecilia_formosa
ENSCVAG00000011886	trmt1	100	84.043	ENSPLAG00000018788	trmt1	100	85.075	Poecilia_latipinna
ENSCVAG00000011886	trmt1	100	85.106	ENSPMEG00000013120	trmt1	100	85.106	Poecilia_mexicana
ENSCVAG00000011886	trmt1	99	83.717	ENSPREG00000000211	trmt1	96	83.717	Poecilia_reticulata
ENSCVAG00000011886	trmt1	89	66.164	ENSPPYG00000009622	TRMT1	90	66.164	Pongo_abelii
ENSCVAG00000011886	trmt1	85	62.697	ENSPCAG00000003698	TRMT1	87	62.697	Procavia_capensis
ENSCVAG00000011886	trmt1	85	67.250	ENSPCOG00000008653	TRMT1	87	67.250	Propithecus_coquereli
ENSCVAG00000011886	trmt1	85	67.250	ENSPVAG00000015076	TRMT1	87	67.250	Pteropus_vampyrus
ENSCVAG00000011886	trmt1	89	82.794	ENSPNYG00000013960	trmt1	96	82.794	Pundamilia_nyererei
ENSCVAG00000011886	trmt1	93	68.810	ENSPNAG00000024859	trmt1	98	68.810	Pygocentrus_nattereri
ENSCVAG00000011886	trmt1	85	66.843	ENSRNOG00000002914	Trmt1	89	66.843	Rattus_norvegicus
ENSCVAG00000011886	trmt1	90	49.172	ENSRBIG00000037505	-	92	49.834	Rhinopithecus_bieti
ENSCVAG00000011886	trmt1	89	66.167	ENSRBIG00000038324	TRMT1	90	66.167	Rhinopithecus_bieti
ENSCVAG00000011886	trmt1	90	48.586	ENSRROG00000031847	-	91	49.251	Rhinopithecus_roxellana
ENSCVAG00000011886	trmt1	89	66.167	ENSRROG00000028599	TRMT1	90	66.167	Rhinopithecus_roxellana
ENSCVAG00000011886	trmt1	77	38.679	YDR120C	-	92	38.679	Saccharomyces_cerevisiae
ENSCVAG00000011886	trmt1	87	64.676	ENSSBOG00000028861	TRMT1	93	64.676	Saimiri_boliviensis_boliviensis
ENSCVAG00000011886	trmt1	86	69.788	ENSSHAG00000014381	TRMT1	93	69.474	Sarcophilus_harrisii
ENSCVAG00000011886	trmt1	89	78.194	ENSSFOG00015004139	trmt1	94	74.528	Scleropages_formosus
ENSCVAG00000011886	trmt1	88	85.959	ENSSMAG00000021136	trmt1	99	77.861	Scophthalmus_maximus
ENSCVAG00000011886	trmt1	100	81.194	ENSSDUG00000012740	trmt1	100	81.194	Seriola_dumerili
ENSCVAG00000011886	trmt1	100	80.896	ENSSLDG00000005971	trmt1	100	80.896	Seriola_lalandi_dorsalis
ENSCVAG00000011886	trmt1	77	65.698	ENSSARG00000005138	TRMT1	91	65.698	Sorex_araneus
ENSCVAG00000011886	trmt1	87	52.787	ENSSPUG00000001084	TRMT1	91	53.217	Sphenodon_punctatus
ENSCVAG00000011886	trmt1	100	80.210	ENSSPAG00000007153	trmt1	99	84.718	Stegastes_partitus
ENSCVAG00000011886	trmt1	86	67.133	ENSSSCG00000013744	TRMT1	90	67.133	Sus_scrofa
ENSCVAG00000011886	trmt1	96	74.034	ENSTRUG00000010700	trmt1	95	74.189	Takifugu_rubripes
ENSCVAG00000011886	trmt1	87	84.561	ENSTNIG00000018808	trmt1	99	84.561	Tetraodon_nigroviridis
ENSCVAG00000011886	trmt1	88	63.575	ENSTTRG00000006379	TRMT1	90	63.575	Tursiops_truncatus
ENSCVAG00000011886	trmt1	92	64.032	ENSUAMG00000022911	TRMT1	95	64.151	Ursus_americanus
ENSCVAG00000011886	trmt1	86	66.609	ENSUMAG00000006027	TRMT1	91	66.609	Ursus_maritimus
ENSCVAG00000011886	trmt1	89	66.279	ENSVVUG00000024177	TRMT1	90	66.279	Vulpes_vulpes
ENSCVAG00000011886	trmt1	70	70.000	ENSXETG00000033863	TRMT1	92	70.000	Xenopus_tropicalis
ENSCVAG00000011886	trmt1	100	84.954	ENSXCOG00000015733	trmt1	100	84.954	Xiphophorus_couchianus
ENSCVAG00000011886	trmt1	87	91.623	ENSXMAG00000013823	trmt1	99	91.623	Xiphophorus_maculatus