EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000012008 (Gene tree)
Gene ID: 107100025
Gene Symbol: smfn
Alias: zgc:73191
Full Name: RNA exonuclease 2
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 13442 bases
Position: chrKL653431.1:268697-282138
Accession: 107100025
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000009950	RNase_T	PF00929.24	3.7e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000016511	-	558	XM_015398362	ENSCVAP00000009950	185 (aa)	XP_015253848	-

Gene Model

Click here to download ENSCVAG00000012008's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000012008's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000012008	smfn	99	79.235	ENSG00000076043	REXO2	97	79.235	Homo_sapiens
ENSCVAG00000012008	smfn	59	88.182	ENSAPOG00000011971	smfn	95	88.182	Acanthochromis_polyacanthus
ENSCVAG00000012008	smfn	99	79.235	ENSAMEG00000013263	REXO2	77	79.235	Ailuropoda_melanoleuca
ENSCVAG00000012008	smfn	100	80.541	ENSACIG00000023553	smfn	100	80.541	Amphilophus_citrinellus
ENSCVAG00000012008	smfn	69	85.156	ENSAOCG00000011565	smfn	78	85.156	Amphiprion_ocellaris
ENSCVAG00000012008	smfn	97	86.667	ENSAPEG00000012435	smfn	67	86.667	Amphiprion_percula
ENSCVAG00000012008	smfn	97	84.444	ENSATEG00000015385	smfn	65	84.444	Anabas_testudineus
ENSCVAG00000012008	smfn	99	78.689	ENSAPLG00000005045	REXO2	91	78.689	Anas_platyrhynchos
ENSCVAG00000012008	smfn	94	69.540	ENSACAG00000011631	REXO2	81	69.540	Anolis_carolinensis
ENSCVAG00000012008	smfn	99	79.781	ENSANAG00000020834	REXO2	77	79.781	Aotus_nancymaae
ENSCVAG00000012008	smfn	63	64.655	ENSANAG00000027457	-	96	60.000	Aotus_nancymaae
ENSCVAG00000012008	smfn	91	88.757	ENSACLG00000024566	smfn	89	88.757	Astatotilapia_calliptera
ENSCVAG00000012008	smfn	99	79.235	ENSBTAG00000005843	REXO2	77	79.235	Bos_taurus
ENSCVAG00000012008	smfn	91	49.704	WBGene00007429	C08B6.8	92	55.556	Caenorhabditis_elegans
ENSCVAG00000012008	smfn	99	78.689	ENSCJAG00000012434	REXO2	77	78.689	Callithrix_jacchus
ENSCVAG00000012008	smfn	99	78.142	ENSCAFG00000013511	REXO2	77	78.142	Canis_familiaris
ENSCVAG00000012008	smfn	99	79.235	ENSCAFG00020002513	REXO2	77	79.235	Canis_lupus_dingo
ENSCVAG00000012008	smfn	99	79.235	ENSCHIG00000009264	REXO2	77	79.235	Capra_hircus
ENSCVAG00000012008	smfn	99	79.781	ENSTSYG00000002237	REXO2	77	79.781	Carlito_syrichta
ENSCVAG00000012008	smfn	99	69.399	ENSTSYG00000027948	-	93	69.399	Carlito_syrichta
ENSCVAG00000012008	smfn	99	79.781	ENSCAPG00000006093	REXO2	97	79.781	Cavia_aperea
ENSCVAG00000012008	smfn	99	79.781	ENSCPOG00000010548	REXO2	77	79.781	Cavia_porcellus
ENSCVAG00000012008	smfn	99	79.781	ENSCCAG00000034979	REXO2	77	79.781	Cebus_capucinus
ENSCVAG00000012008	smfn	99	79.235	ENSCATG00000015278	REXO2	77	79.235	Cercocebus_atys
ENSCVAG00000012008	smfn	99	79.781	ENSCLAG00000011195	REXO2	78	79.781	Chinchilla_lanigera
ENSCVAG00000012008	smfn	99	79.235	ENSCSAG00000002754	REXO2	77	79.235	Chlorocebus_sabaeus
ENSCVAG00000012008	smfn	99	78.142	ENSCHOG00000000642	-	77	78.142	Choloepus_hoffmanni
ENSCVAG00000012008	smfn	76	74.286	ENSCPBG00000009359	REXO2	97	74.286	Chrysemys_picta_bellii
ENSCVAG00000012008	smfn	90	58.434	ENSCING00000009858	-	80	58.434	Ciona_intestinalis
ENSCVAG00000012008	smfn	99	79.235	ENSCANG00000034756	REXO2	77	79.235	Colobus_angolensis_palliatus
ENSCVAG00000012008	smfn	99	77.596	ENSCGRG00001010922	-	89	77.596	Cricetulus_griseus_chok1gshd
ENSCVAG00000012008	smfn	99	78.689	ENSCGRG00001013673	-	89	78.689	Cricetulus_griseus_chok1gshd
ENSCVAG00000012008	smfn	99	80.328	ENSCGRG00001019814	-	77	80.328	Cricetulus_griseus_chok1gshd
ENSCVAG00000012008	smfn	99	80.328	ENSCGRG00000006235	Rexo2	77	80.328	Cricetulus_griseus_crigri
ENSCVAG00000012008	smfn	100	82.162	ENSCSEG00000007214	smfn	67	82.162	Cynoglossus_semilaevis
ENSCVAG00000012008	smfn	100	76.757	ENSDARG00000009806	smfn	70	76.757	Danio_rerio
ENSCVAG00000012008	smfn	86	83.125	ENSDNOG00000046533	REXO2	77	83.125	Dasypus_novemcinctus
ENSCVAG00000012008	smfn	99	79.781	ENSDORG00000011255	Rexo2	77	79.781	Dipodomys_ordii
ENSCVAG00000012008	smfn	99	61.202	ENSDORG00000025142	-	79	61.202	Dipodomys_ordii
ENSCVAG00000012008	smfn	90	56.287	FBgn0039115	CG10214	79	56.287	Drosophila_melanogaster
ENSCVAG00000012008	smfn	92	76.608	ENSEBUG00000013964	REXO2	59	76.608	Eptatretus_burgeri
ENSCVAG00000012008	smfn	99	79.235	ENSEASG00005006674	REXO2	77	79.235	Equus_asinus_asinus
ENSCVAG00000012008	smfn	99	79.235	ENSECAG00000005988	REXO2	77	79.235	Equus_caballus
ENSCVAG00000012008	smfn	98	79.121	ENSELUG00000020072	smfn	63	79.121	Esox_lucius
ENSCVAG00000012008	smfn	99	79.235	ENSFCAG00000018632	REXO2	77	79.235	Felis_catus
ENSCVAG00000012008	smfn	99	77.049	ENSFALG00000010044	REXO2	91	77.049	Ficedula_albicollis
ENSCVAG00000012008	smfn	99	79.781	ENSFDAG00000011764	REXO2	77	79.781	Fukomys_damarensis
ENSCVAG00000012008	smfn	94	78.613	ENSGMOG00000006370	smfn	90	78.613	Gadus_morhua
ENSCVAG00000012008	smfn	99	79.235	ENSGALG00000035980	REXO2	79	79.235	Gallus_gallus
ENSCVAG00000012008	smfn	99	89.071	ENSGAFG00000015349	smfn	65	89.071	Gambusia_affinis
ENSCVAG00000012008	smfn	100	81.081	ENSGACG00000020096	smfn	91	81.081	Gasterosteus_aculeatus
ENSCVAG00000012008	smfn	99	78.689	ENSGAGG00000021126	REXO2	80	78.689	Gopherus_agassizii
ENSCVAG00000012008	smfn	99	79.235	ENSGGOG00000023267	REXO2	77	79.235	Gorilla_gorilla
ENSCVAG00000012008	smfn	70	81.395	ENSHBUG00000020097	REXO2	63	81.395	Haplochromis_burtoni
ENSCVAG00000012008	smfn	99	79.235	ENSHGLG00000013556	REXO2	77	79.235	Heterocephalus_glaber_female
ENSCVAG00000012008	smfn	99	79.781	ENSHGLG00100005257	REXO2	77	79.781	Heterocephalus_glaber_male
ENSCVAG00000012008	smfn	91	80.357	ENSHCOG00000007122	smfn	94	80.357	Hippocampus_comes
ENSCVAG00000012008	smfn	99	79.235	ENSIPUG00000020440	rexo2	68	79.235	Ictalurus_punctatus
ENSCVAG00000012008	smfn	99	79.781	ENSSTOG00000012465	REXO2	77	79.781	Ictidomys_tridecemlineatus
ENSCVAG00000012008	smfn	99	54.645	ENSJJAG00000022605	-	71	54.645	Jaculus_jaculus
ENSCVAG00000012008	smfn	99	79.781	ENSJJAG00000013710	-	77	79.781	Jaculus_jaculus
ENSCVAG00000012008	smfn	100	82.162	ENSKMAG00000016795	smfn	66	82.162	Kryptolebias_marmoratus
ENSCVAG00000012008	smfn	97	84.444	ENSLBEG00000006021	smfn	95	84.444	Labrus_bergylta
ENSCVAG00000012008	smfn	100	66.845	ENSLACG00000018623	REXO2	76	66.845	Latimeria_chalumnae
ENSCVAG00000012008	smfn	99	79.235	ENSLOCG00000002389	smfn	87	79.235	Lepisosteus_oculatus
ENSCVAG00000012008	smfn	99	79.235	ENSLAFG00000012451	REXO2	77	79.235	Loxodonta_africana
ENSCVAG00000012008	smfn	99	79.235	ENSMFAG00000041155	REXO2	77	79.235	Macaca_fascicularis
ENSCVAG00000012008	smfn	99	79.235	ENSMMUG00000012269	REXO2	77	79.235	Macaca_mulatta
ENSCVAG00000012008	smfn	99	79.235	ENSMNEG00000033379	REXO2	77	79.235	Macaca_nemestrina
ENSCVAG00000012008	smfn	99	79.235	ENSMLEG00000036571	REXO2	77	79.235	Mandrillus_leucophaeus
ENSCVAG00000012008	smfn	97	85.000	ENSMAMG00000021209	smfn	65	85.000	Mastacembelus_armatus
ENSCVAG00000012008	smfn	91	88.757	ENSMZEG00005020730	REXO2	65	88.757	Maylandia_zebra
ENSCVAG00000012008	smfn	91	88.757	ENSMZEG00005023224	-	65	88.757	Maylandia_zebra
ENSCVAG00000012008	smfn	84	77.215	ENSMGAG00000003026	REXO2	97	77.215	Meleagris_gallopavo
ENSCVAG00000012008	smfn	99	80.328	ENSMAUG00000014576	Rexo2	77	80.328	Mesocricetus_auratus
ENSCVAG00000012008	smfn	99	79.781	ENSMICG00000010094	REXO2	77	79.781	Microcebus_murinus
ENSCVAG00000012008	smfn	99	80.328	ENSMOCG00000009016	Rexo2	77	80.328	Microtus_ochrogaster
ENSCVAG00000012008	smfn	97	81.667	ENSMMOG00000006430	smfn	67	81.667	Mola_mola
ENSCVAG00000012008	smfn	99	79.235	ENSMODG00000013913	REXO2	78	79.235	Monodelphis_domestica
ENSCVAG00000012008	smfn	97	84.444	ENSMALG00000018130	smfn	51	84.444	Monopterus_albus
ENSCVAG00000012008	smfn	99	78.689	MGP_CAROLIEiJ_G0032166	Rexo2	77	78.689	Mus_caroli
ENSCVAG00000012008	smfn	90	81.928	ENSMUSG00000032026	Rexo2	77	78.689	Mus_musculus
ENSCVAG00000012008	smfn	90	81.928	MGP_PahariEiJ_G0015034	Rexo2	77	78.689	Mus_pahari
ENSCVAG00000012008	smfn	90	81.928	MGP_SPRETEiJ_G0033305	Rexo2	77	78.689	Mus_spretus
ENSCVAG00000012008	smfn	99	79.235	ENSMPUG00000003947	REXO2	77	79.235	Mustela_putorius_furo
ENSCVAG00000012008	smfn	99	78.689	ENSMLUG00000009030	REXO2	77	78.689	Myotis_lucifugus
ENSCVAG00000012008	smfn	99	79.235	ENSNGAG00000008819	Rexo2	89	79.235	Nannospalax_galili
ENSCVAG00000012008	smfn	100	81.622	ENSNBRG00000006529	smfn	97	81.622	Neolamprologus_brichardi
ENSCVAG00000012008	smfn	99	79.235	ENSNLEG00000029745	REXO2	77	79.235	Nomascus_leucogenys
ENSCVAG00000012008	smfn	99	78.689	ENSMEUG00000011558	REXO2	84	78.689	Notamacropus_eugenii
ENSCVAG00000012008	smfn	70	75.969	ENSOPRG00000011076	REXO2	54	75.969	Ochotona_princeps
ENSCVAG00000012008	smfn	87	65.217	ENSODEG00000016046	-	79	65.217	Octodon_degus
ENSCVAG00000012008	smfn	99	79.781	ENSODEG00000009750	-	97	79.781	Octodon_degus
ENSCVAG00000012008	smfn	97	86.111	ENSONIG00000001954	smfn	77	86.111	Oreochromis_niloticus
ENSCVAG00000012008	smfn	99	80.874	ENSOANG00000001754	REXO2	77	80.874	Ornithorhynchus_anatinus
ENSCVAG00000012008	smfn	99	79.781	ENSOCUG00000004274	REXO2	73	79.781	Oryctolagus_cuniculus
ENSCVAG00000012008	smfn	99	79.781	ENSORLG00000005119	smfn	59	79.781	Oryzias_latipes
ENSCVAG00000012008	smfn	99	80.328	ENSORLG00020010121	smfn	59	80.328	Oryzias_latipes_hni
ENSCVAG00000012008	smfn	99	80.328	ENSORLG00015015699	smfn	59	80.328	Oryzias_latipes_hsok
ENSCVAG00000012008	smfn	99	75.956	ENSOMEG00000016878	REXO2	67	75.956	Oryzias_melastigma
ENSCVAG00000012008	smfn	76	72.857	ENSOMEG00000008940	-	98	72.857	Oryzias_melastigma
ENSCVAG00000012008	smfn	99	79.781	ENSOGAG00000016860	REXO2	77	79.781	Otolemur_garnettii
ENSCVAG00000012008	smfn	99	79.235	ENSOARG00000001040	REXO2	86	79.235	Ovis_aries
ENSCVAG00000012008	smfn	99	79.235	ENSPPAG00000039849	REXO2	77	79.235	Pan_paniscus
ENSCVAG00000012008	smfn	99	79.235	ENSPPRG00000007255	REXO2	77	79.235	Panthera_pardus
ENSCVAG00000012008	smfn	99	79.235	ENSPTIG00000015578	REXO2	97	79.235	Panthera_tigris_altaica
ENSCVAG00000012008	smfn	99	79.235	ENSPTRG00000004306	REXO2	77	79.235	Pan_troglodytes
ENSCVAG00000012008	smfn	99	79.235	ENSPANG00000010675	REXO2	77	79.235	Papio_anubis
ENSCVAG00000012008	smfn	100	77.297	ENSPKIG00000000911	smfn	77	80.405	Paramormyrops_kingsleyae
ENSCVAG00000012008	smfn	99	79.781	ENSPSIG00000005151	REXO2	67	79.781	Pelodiscus_sinensis
ENSCVAG00000012008	smfn	99	82.514	ENSPMGG00000007442	smfn	97	82.514	Periophthalmus_magnuspinnatus
ENSCVAG00000012008	smfn	84	73.718	ENSPEMG00000001421	Rexo2	72	71.795	Peromyscus_maniculatus_bairdii
ENSCVAG00000012008	smfn	63	73.276	ENSPMAG00000001022	REXO2	100	73.276	Petromyzon_marinus
ENSCVAG00000012008	smfn	99	89.071	ENSPFOG00000017861	smfn	90	89.071	Poecilia_formosa
ENSCVAG00000012008	smfn	88	85.276	ENSPLAG00000007327	REXO2	62	85.276	Poecilia_latipinna
ENSCVAG00000012008	smfn	99	89.617	ENSPMEG00000017343	smfn	65	89.617	Poecilia_mexicana
ENSCVAG00000012008	smfn	99	89.071	ENSPREG00000016438	smfn	65	89.071	Poecilia_reticulata
ENSCVAG00000012008	smfn	99	79.235	ENSPPYG00000003895	REXO2	77	79.235	Pongo_abelii
ENSCVAG00000012008	smfn	99	78.689	ENSPCAG00000005237	REXO2	77	78.689	Procavia_capensis
ENSCVAG00000012008	smfn	79	82.877	ENSPCOG00000027639	REXO2	75	82.877	Propithecus_coquereli
ENSCVAG00000012008	smfn	84	77.419	ENSPVAG00000005295	REXO2	65	77.419	Pteropus_vampyrus
ENSCVAG00000012008	smfn	91	88.166	ENSPNYG00000018401	smfn	65	88.166	Pundamilia_nyererei
ENSCVAG00000012008	smfn	99	79.781	ENSPNAG00000005290	smfn	68	79.781	Pygocentrus_nattereri
ENSCVAG00000012008	smfn	99	79.235	ENSRNOG00000018939	Rexo2	77	79.235	Rattus_norvegicus
ENSCVAG00000012008	smfn	99	79.235	ENSRBIG00000037809	REXO2	77	79.235	Rhinopithecus_bieti
ENSCVAG00000012008	smfn	99	79.235	ENSRROG00000038928	REXO2	77	79.235	Rhinopithecus_roxellana
ENSCVAG00000012008	smfn	92	43.575	YLR059C	REX2	67	43.889	Saccharomyces_cerevisiae
ENSCVAG00000012008	smfn	99	79.781	ENSSBOG00000028651	REXO2	77	79.781	Saimiri_boliviensis_boliviensis
ENSCVAG00000012008	smfn	99	79.235	ENSSHAG00000008008	REXO2	78	79.235	Sarcophilus_harrisii
ENSCVAG00000012008	smfn	99	78.689	ENSSFOG00015022414	smfn	97	78.689	Scleropages_formosus
ENSCVAG00000012008	smfn	99	80.328	ENSSMAG00000003168	smfn	67	80.328	Scophthalmus_maximus
ENSCVAG00000012008	smfn	97	85.000	ENSSDUG00000015624	smfn	63	85.000	Seriola_dumerili
ENSCVAG00000012008	smfn	97	83.889	ENSSLDG00000014005	smfn	63	83.889	Seriola_lalandi_dorsalis
ENSCVAG00000012008	smfn	69	85.827	ENSSARG00000014530	REXO2	100	85.827	Sorex_araneus
ENSCVAG00000012008	smfn	84	74.839	ENSSPUG00000006005	REXO2	83	74.839	Sphenodon_punctatus
ENSCVAG00000012008	smfn	97	86.667	ENSSPAG00000001530	smfn	97	86.667	Stegastes_partitus
ENSCVAG00000012008	smfn	99	79.235	ENSSSCG00000015056	REXO2	77	79.235	Sus_scrofa
ENSCVAG00000012008	smfn	99	75.956	ENSTGUG00000000121	REXO2	78	75.956	Taeniopygia_guttata
ENSCVAG00000012008	smfn	98	80.769	ENSTRUG00000021529	smfn	68	80.769	Takifugu_rubripes
ENSCVAG00000012008	smfn	97	81.111	ENSTNIG00000008588	smfn	80	81.111	Tetraodon_nigroviridis
ENSCVAG00000012008	smfn	99	79.781	ENSTBEG00000017040	REXO2	77	79.781	Tupaia_belangeri
ENSCVAG00000012008	smfn	99	78.689	ENSTTRG00000014928	REXO2	77	78.689	Tursiops_truncatus
ENSCVAG00000012008	smfn	99	72.973	ENSUAMG00000019096	REXO2	75	82.192	Ursus_americanus
ENSCVAG00000012008	smfn	99	79.235	ENSUMAG00000003770	REXO2	77	79.235	Ursus_maritimus
ENSCVAG00000012008	smfn	90	61.446	ENSVPAG00000006301	REXO2	100	59.893	Vicugna_pacos
ENSCVAG00000012008	smfn	99	79.235	ENSVVUG00000025223	REXO2	78	79.235	Vulpes_vulpes
ENSCVAG00000012008	smfn	99	77.174	ENSXETG00000012648	rexo2	76	76.757	Xenopus_tropicalis
ENSCVAG00000012008	smfn	99	89.617	ENSXCOG00000018838	smfn	93	89.617	Xiphophorus_couchianus
ENSCVAG00000012008	smfn	99	90.164	ENSXMAG00000021125	smfn	59	90.164	Xiphophorus_maculatus