EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000012032 (Gene tree)
Gene ID: 107099543
Gene Symbol: rrp8
Alias: fk33d07|si:ch211-149e23.3|si:ch211-152b13.1|wu:fk33d07
Full Name: ribosomal RNA processing 8
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 6968 bases
Position: chrKL653382.1:178239-185206
Accession: 107099543
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000026456	Methyltransf_8	PF05148.15	2.3e-88	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000029376	-	2732	XM_015397709	ENSCVAP00000026456	558 (aa)	XP_015253195	UPI00074253FF

Gene Model

Click here to download ENSCVAG00000012032's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000012032's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000012032	rrp8	69	56.466	ENSG00000132275	RRP8	77	60.000	Homo_sapiens
ENSCVAG00000012032	rrp8	100	61.239	ENSAPOG00000010806	rrp8	98	60.708	Acanthochromis_polyacanthus
ENSCVAG00000012032	rrp8	100	61.239	ENSAPOG00000008509	-	100	60.708	Acanthochromis_polyacanthus
ENSCVAG00000012032	rrp8	100	61.239	ENSAPOG00000010798	-	98	60.708	Acanthochromis_polyacanthus
ENSCVAG00000012032	rrp8	93	58.429	ENSACIG00000019896	rrp8	99	57.854	Amphilophus_citrinellus
ENSCVAG00000012032	rrp8	100	61.239	ENSAOCG00000008785	rrp8	100	60.708	Amphiprion_ocellaris
ENSCVAG00000012032	rrp8	100	60.885	ENSAPEG00000008416	rrp8	100	60.354	Amphiprion_percula
ENSCVAG00000012032	rrp8	93	59.287	ENSATEG00000014110	rrp8	98	59.099	Anabas_testudineus
ENSCVAG00000012032	rrp8	100	56.424	ENSACLG00000002746	rrp8	100	57.801	Astatotilapia_calliptera
ENSCVAG00000012032	rrp8	59	34.328	ENSCING00000003281	-	91	34.328	Ciona_intestinalis
ENSCVAG00000012032	rrp8	74	42.080	ENSCSAVG00000006435	-	92	41.608	Ciona_savignyi
ENSCVAG00000012032	rrp8	71	59.701	ENSCSEG00000007330	rrp8	100	59.701	Cynoglossus_semilaevis
ENSCVAG00000012032	rrp8	100	47.452	ENSDARG00000071652	rrp8	80	72.973	Danio_rerio
ENSCVAG00000012032	rrp8	100	46.787	ENSELUG00000008665	rrp8	100	46.833	Esox_lucius
ENSCVAG00000012032	rrp8	88	65.269	ENSGAFG00000012331	rrp8	100	64.671	Gambusia_affinis
ENSCVAG00000012032	rrp8	67	58.355	ENSGACG00000011343	rrp8	95	69.718	Gasterosteus_aculeatus
ENSCVAG00000012032	rrp8	54	45.597	ENSGAGG00000005261	RRP8	91	40.657	Gopherus_agassizii
ENSCVAG00000012032	rrp8	100	56.424	ENSHBUG00000017131	rrp8	100	57.979	Haplochromis_burtoni
ENSCVAG00000012032	rrp8	100	49.057	ENSHCOG00000001293	rrp8	100	48.870	Hippocampus_comes
ENSCVAG00000012032	rrp8	100	45.035	ENSIPUG00000017733	rrp8	100	45.035	Ictalurus_punctatus
ENSCVAG00000012032	rrp8	100	61.646	ENSKMAG00000009229	rrp8	100	62.522	Kryptolebias_marmoratus
ENSCVAG00000012032	rrp8	69	62.371	ENSLBEG00000019937	rrp8	100	61.809	Labrus_bergylta
ENSCVAG00000012032	rrp8	62	48.159	ENSLACG00000001252	-	99	45.843	Latimeria_chalumnae
ENSCVAG00000012032	rrp8	55	48.052	ENSLOCG00000013776	-	89	52.586	Lepisosteus_oculatus
ENSCVAG00000012032	rrp8	100	44.974	ENSLOCG00000009591	rrp8	100	44.542	Lepisosteus_oculatus
ENSCVAG00000012032	rrp8	100	59.582	ENSMAMG00000009679	rrp8	100	58.957	Mastacembelus_armatus
ENSCVAG00000012032	rrp8	100	56.424	ENSMZEG00005008926	rrp8	100	57.801	Maylandia_zebra
ENSCVAG00000012032	rrp8	93	53.585	ENSMMOG00000015709	rrp8	99	53.160	Mola_mola
ENSCVAG00000012032	rrp8	100	58.115	ENSMALG00000015984	rrp8	100	57.941	Monopterus_albus
ENSCVAG00000012032	rrp8	75	60.138	ENSNBRG00000023416	rrp8	99	62.381	Neolamprologus_brichardi
ENSCVAG00000012032	rrp8	69	56.466	ENSNLEG00000017445	RRP8	51	56.466	Nomascus_leucogenys
ENSCVAG00000012032	rrp8	74	52.153	ENSONIG00000016861	rrp8	96	53.349	Oreochromis_niloticus
ENSCVAG00000012032	rrp8	100	54.482	ENSORLG00000004175	rrp8	99	54.482	Oryzias_latipes
ENSCVAG00000012032	rrp8	100	55.536	ENSORLG00020011413	rrp8	99	55.203	Oryzias_latipes_hni
ENSCVAG00000012032	rrp8	100	55.203	ENSORLG00015015410	rrp8	99	55.282	Oryzias_latipes_hsok
ENSCVAG00000012032	rrp8	100	55.282	ENSOMEG00000003161	rrp8	100	55.614	Oryzias_melastigma
ENSCVAG00000012032	rrp8	100	45.960	ENSPKIG00000024217	rrp8	100	45.777	Paramormyrops_kingsleyae
ENSCVAG00000012032	rrp8	100	66.316	ENSPFOG00000007308	rrp8	100	65.965	Poecilia_formosa
ENSCVAG00000012032	rrp8	100	66.842	ENSPLAG00000011349	rrp8	100	66.140	Poecilia_latipinna
ENSCVAG00000012032	rrp8	100	66.491	ENSPMEG00000009888	rrp8	100	65.965	Poecilia_mexicana
ENSCVAG00000012032	rrp8	88	63.065	ENSPREG00000008450	rrp8	100	62.475	Poecilia_reticulata
ENSCVAG00000012032	rrp8	66	56.466	ENSPPYG00000003538	RRP8	50	56.466	Pongo_abelii
ENSCVAG00000012032	rrp8	100	57.194	ENSPNYG00000002878	rrp8	100	57.726	Pundamilia_nyererei
ENSCVAG00000012032	rrp8	54	47.604	ENSSHAG00000009273	-	62	47.604	Sarcophilus_harrisii
ENSCVAG00000012032	rrp8	100	46.062	ENSSFOG00015003917	rrp8	99	46.062	Scleropages_formosus
ENSCVAG00000012032	rrp8	100	59.123	ENSSMAG00000004859	rrp8	100	58.584	Scophthalmus_maximus
ENSCVAG00000012032	rrp8	100	61.511	ENSSDUG00000010477	rrp8	100	61.511	Seriola_dumerili
ENSCVAG00000012032	rrp8	100	61.014	ENSSLDG00000000521	rrp8	100	61.160	Seriola_lalandi_dorsalis
ENSCVAG00000012032	rrp8	69	65.296	ENSSPAG00000006664	rrp8	100	65.586	Stegastes_partitus
ENSCVAG00000012032	rrp8	100	55.240	ENSTRUG00000021812	rrp8	100	55.240	Takifugu_rubripes
ENSCVAG00000012032	rrp8	71	68.734	ENSXCOG00000006156	rrp8	100	68.734	Xiphophorus_couchianus
ENSCVAG00000012032	rrp8	100	66.432	ENSXMAG00000005011	rrp8	100	67.311	Xiphophorus_maculatus