EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000012049 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 13435 bases
Position: chrKL652947.1:823155-836589
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000009967	ResIII	PF04851.15	3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000029374	-	1761	-	ENSCVAP00000009967	586 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000012049's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000012049's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000012049	-	79	34.127	ENSCVAG00000008090	ercc6l	70	34.127
ENSCVAG00000012049	-	65	37.531	ENSCVAG00000020866	-	73	37.531
ENSCVAG00000012049	-	58	37.594	ENSCVAG00000019561	rad54l	63	37.594
ENSCVAG00000012049	-	82	44.699	ENSCVAG00000008668	smarca5	51	43.973
ENSCVAG00000012049	-	71	34.894	ENSCVAG00000000159	hells	88	34.894

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000012049	-	88	90.432	ENSACIG00000012023	-	97	90.432	Amphilophus_citrinellus
ENSCVAG00000012049	-	85	92.023	ENSLBEG00000009390	-	94	97.211	Labrus_bergylta
ENSCVAG00000012049	-	84	94.747	ENSMAMG00000007069	srcap	90	94.747	Mastacembelus_armatus