EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000012104 (Gene tree)
Gene ID: 107093809
Gene Symbol: mrm1
Alias: si:dkey-189h5.1
Full Name: mitochondrial rRNA methyltransferase 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 1465 bases
Position: chrKL652947.1:757791-759255
Accession: 107093809
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000026495	SpoU_sub_bind	PF08032.12	3e-15	1	1
ENSCVAP00000026495	SpoU_methylase	PF00588.19	6.9e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000029402	-	1465	XM_015389092	ENSCVAP00000026495	378 (aa)	XP_015244578	UPI000742C83D

Gene Model

Click here to download ENSCVAG00000012104's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000012104's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000012104	mrm1	72	46.996	ENSG00000278619	MRM1	76	46.996	Homo_sapiens
ENSCVAG00000012104	mrm1	99	59.383	ENSAPOG00000016309	mrm1	95	59.383	Acanthochromis_polyacanthus
ENSCVAG00000012104	mrm1	72	46.643	ENSAMEG00000008301	MRM1	76	46.643	Ailuropoda_melanoleuca
ENSCVAG00000012104	mrm1	97	58.656	ENSACIG00000012244	mrm1	98	58.656	Amphilophus_citrinellus
ENSCVAG00000012104	mrm1	99	60.668	ENSAOCG00000000362	mrm1	95	60.668	Amphiprion_ocellaris
ENSCVAG00000012104	mrm1	99	60.411	ENSAPEG00000004511	mrm1	95	60.411	Amphiprion_percula
ENSCVAG00000012104	mrm1	66	50.787	ENSAPLG00000006433	MRM1	82	52.756	Anas_platyrhynchos
ENSCVAG00000012104	mrm1	66	49.020	ENSACAG00000002573	MRM1	79	49.020	Anolis_carolinensis
ENSCVAG00000012104	mrm1	72	46.290	ENSANAG00000025500	MRM1	77	46.290	Aotus_nancymaae
ENSCVAG00000012104	mrm1	72	69.534	ENSACLG00000023745	mrm1	97	69.896	Astatotilapia_calliptera
ENSCVAG00000012104	mrm1	75	56.081	ENSAMXG00000007295	mrm1	74	56.419	Astyanax_mexicanus
ENSCVAG00000012104	mrm1	75	56.081	ENSAMXG00000030596	mrm1	74	56.419	Astyanax_mexicanus
ENSCVAG00000012104	mrm1	72	47.703	ENSBTAG00000010311	MRM1	76	47.703	Bos_taurus
ENSCVAG00000012104	mrm1	72	45.583	ENSCJAG00000001023	MRM1	77	45.583	Callithrix_jacchus
ENSCVAG00000012104	mrm1	74	46.809	ENSCAFG00000017849	MRM1	80	46.809	Canis_familiaris
ENSCVAG00000012104	mrm1	67	48.438	ENSCAFG00020002377	MRM1	80	45.745	Canis_lupus_dingo
ENSCVAG00000012104	mrm1	76	46.284	ENSCHIG00000008558	MRM1	80	46.284	Capra_hircus
ENSCVAG00000012104	mrm1	76	45.946	ENSTSYG00000036380	MRM1	79	46.284	Carlito_syrichta
ENSCVAG00000012104	mrm1	74	44.251	ENSCPOG00000004283	MRM1	78	44.251	Cavia_porcellus
ENSCVAG00000012104	mrm1	72	46.290	ENSCCAG00000020032	MRM1	77	46.290	Cebus_capucinus
ENSCVAG00000012104	mrm1	72	46.996	ENSCATG00000041516	MRM1	76	46.996	Cercocebus_atys
ENSCVAG00000012104	mrm1	76	45.973	ENSCLAG00000010960	MRM1	80	45.973	Chinchilla_lanigera
ENSCVAG00000012104	mrm1	72	46.643	ENSCSAG00000006055	MRM1	76	46.643	Chlorocebus_sabaeus
ENSCVAG00000012104	mrm1	71	46.909	ENSCPBG00000009581	MRM1	59	46.909	Chrysemys_picta_bellii
ENSCVAG00000012104	mrm1	72	46.643	ENSCANG00000025543	MRM1	76	46.643	Colobus_angolensis_palliatus
ENSCVAG00000012104	mrm1	72	46.831	ENSCGRG00001001937	Mrm1	86	46.503	Cricetulus_griseus_chok1gshd
ENSCVAG00000012104	mrm1	72	46.831	ENSCGRG00000009593	Mrm1	86	46.503	Cricetulus_griseus_crigri
ENSCVAG00000012104	mrm1	75	69.930	ENSCSEG00000014575	mrm1	77	69.930	Cynoglossus_semilaevis
ENSCVAG00000012104	mrm1	51	60.825	ENSDARG00000059658	mrm1	98	60.825	Danio_rerio
ENSCVAG00000012104	mrm1	72	39.785	ENSDNOG00000035159	MRM1	75	39.785	Dasypus_novemcinctus
ENSCVAG00000012104	mrm1	54	51.402	ENSDORG00000013267	Mrm1	91	51.402	Dipodomys_ordii
ENSCVAG00000012104	mrm1	60	42.917	ENSETEG00000000378	MRM1	87	42.857	Echinops_telfairi
ENSCVAG00000012104	mrm1	74	46.048	ENSEASG00005002123	MRM1	79	46.048	Equus_asinus_asinus
ENSCVAG00000012104	mrm1	74	45.704	ENSECAG00000025139	MRM1	79	44.483	Equus_caballus
ENSCVAG00000012104	mrm1	53	41.748	ENSEEUG00000013434	-	89	41.951	Erinaceus_europaeus
ENSCVAG00000012104	mrm1	82	57.846	ENSELUG00000012392	mrm1	74	57.846	Esox_lucius
ENSCVAG00000012104	mrm1	76	45.118	ENSFCAG00000031667	MRM1	80	45.118	Felis_catus
ENSCVAG00000012104	mrm1	58	48.673	ENSFDAG00000018545	MRM1	75	48.673	Fukomys_damarensis
ENSCVAG00000012104	mrm1	90	73.761	ENSFHEG00000005529	mrm1	96	75.143	Fundulus_heteroclitus
ENSCVAG00000012104	mrm1	63	50.410	ENSGALG00000039523	MRM1	96	50.410	Gallus_gallus
ENSCVAG00000012104	mrm1	93	75.000	ENSGAFG00000012959	mrm1	97	75.000	Gambusia_affinis
ENSCVAG00000012104	mrm1	67	74.704	ENSGACG00000004024	mrm1	97	74.409	Gasterosteus_aculeatus
ENSCVAG00000012104	mrm1	73	46.643	ENSGAGG00000000908	MRM1	70	46.643	Gopherus_agassizii
ENSCVAG00000012104	mrm1	72	46.996	ENSGGOG00000007979	MRM1	77	46.996	Gorilla_gorilla
ENSCVAG00000012104	mrm1	72	68.817	ENSHBUG00000004484	mrm1	98	69.204	Haplochromis_burtoni
ENSCVAG00000012104	mrm1	76	43.686	ENSHGLG00000008701	MRM1	81	43.686	Heterocephalus_glaber_female
ENSCVAG00000012104	mrm1	54	50.000	ENSHGLG00100012646	MRM1	74	49.083	Heterocephalus_glaber_male
ENSCVAG00000012104	mrm1	74	65.845	ENSHCOG00000003665	mrm1	80	65.845	Hippocampus_comes
ENSCVAG00000012104	mrm1	74	53.846	ENSIPUG00000022357	mrm1	77	53.846	Ictalurus_punctatus
ENSCVAG00000012104	mrm1	74	44.251	ENSSTOG00000002422	MRM1	83	44.251	Ictidomys_tridecemlineatus
ENSCVAG00000012104	mrm1	72	45.000	ENSJJAG00000010068	Mrm1	91	45.000	Jaculus_jaculus
ENSCVAG00000012104	mrm1	75	68.276	ENSLBEG00000009581	mrm1	97	68.276	Labrus_bergylta
ENSCVAG00000012104	mrm1	73	47.183	ENSLACG00000017664	MRM1	97	47.183	Latimeria_chalumnae
ENSCVAG00000012104	mrm1	75	55.743	ENSLOCG00000004945	mrm1	95	55.743	Lepisosteus_oculatus
ENSCVAG00000012104	mrm1	72	46.996	ENSLAFG00000012584	MRM1	84	46.667	Loxodonta_africana
ENSCVAG00000012104	mrm1	72	46.996	ENSMFAG00000032112	MRM1	77	46.996	Macaca_fascicularis
ENSCVAG00000012104	mrm1	72	46.996	ENSMMUG00000000622	MRM1	79	46.996	Macaca_mulatta
ENSCVAG00000012104	mrm1	72	46.996	ENSMNEG00000044557	MRM1	77	46.996	Macaca_nemestrina
ENSCVAG00000012104	mrm1	72	46.996	ENSMLEG00000031933	MRM1	76	46.996	Mandrillus_leucophaeus
ENSCVAG00000012104	mrm1	73	68.683	ENSMAMG00000007018	mrm1	96	68.621	Mastacembelus_armatus
ENSCVAG00000012104	mrm1	72	69.176	ENSMZEG00005008320	mrm1	97	69.550	Maylandia_zebra
ENSCVAG00000012104	mrm1	72	46.290	ENSMAUG00000020976	Mrm1	86	45.965	Mesocricetus_auratus
ENSCVAG00000012104	mrm1	72	47.143	ENSMICG00000004216	MRM1	81	47.143	Microcebus_murinus
ENSCVAG00000012104	mrm1	79	69.256	ENSMMOG00000001468	mrm1	93	69.256	Mola_mola
ENSCVAG00000012104	mrm1	83	41.796	ENSMODG00000003307	MRM1	71	41.796	Monodelphis_domestica
ENSCVAG00000012104	mrm1	73	70.107	ENSMALG00000014364	mrm1	93	70.035	Monopterus_albus
ENSCVAG00000012104	mrm1	72	46.996	MGP_CAROLIEiJ_G0016896	Mrm1	84	46.996	Mus_caroli
ENSCVAG00000012104	mrm1	72	46.643	ENSMUSG00000018405	Mrm1	84	46.643	Mus_musculus
ENSCVAG00000012104	mrm1	72	46.290	MGP_PahariEiJ_G0018026	Mrm1	84	46.290	Mus_pahari
ENSCVAG00000012104	mrm1	72	46.996	MGP_SPRETEiJ_G0017741	Mrm1	84	46.996	Mus_spretus
ENSCVAG00000012104	mrm1	67	46.970	ENSMPUG00000015063	MRM1	76	45.936	Mustela_putorius_furo
ENSCVAG00000012104	mrm1	76	44.407	ENSMLUG00000013208	MRM1	81	44.407	Myotis_lucifugus
ENSCVAG00000012104	mrm1	72	44.643	ENSNGAG00000019175	Mrm1	83	45.000	Nannospalax_galili
ENSCVAG00000012104	mrm1	72	69.534	ENSNBRG00000023533	mrm1	97	69.896	Neolamprologus_brichardi
ENSCVAG00000012104	mrm1	72	46.996	ENSNLEG00000002300	MRM1	76	46.996	Nomascus_leucogenys
ENSCVAG00000012104	mrm1	76	42.808	ENSOPRG00000012866	MRM1	82	42.808	Ochotona_princeps
ENSCVAG00000012104	mrm1	72	70.036	ENSONIG00000021236	mrm1	99	70.383	Oreochromis_niloticus
ENSCVAG00000012104	mrm1	76	45.734	ENSOCUG00000012149	MRM1	79	45.734	Oryctolagus_cuniculus
ENSCVAG00000012104	mrm1	75	68.750	ENSORLG00000025876	mrm1	95	68.750	Oryzias_latipes
ENSCVAG00000012104	mrm1	75	67.708	ENSORLG00020021701	mrm1	94	67.708	Oryzias_latipes_hni
ENSCVAG00000012104	mrm1	75	68.750	ENSORLG00015020702	mrm1	95	68.512	Oryzias_latipes_hsok
ENSCVAG00000012104	mrm1	75	70.139	ENSOMEG00000003504	mrm1	95	70.139	Oryzias_melastigma
ENSCVAG00000012104	mrm1	76	46.959	ENSOGAG00000013785	MRM1	90	46.959	Otolemur_garnettii
ENSCVAG00000012104	mrm1	76	46.622	ENSOARG00000018616	MRM1	80	46.622	Ovis_aries
ENSCVAG00000012104	mrm1	72	46.996	ENSPPAG00000043135	MRM1	77	46.996	Pan_paniscus
ENSCVAG00000012104	mrm1	76	45.118	ENSPPRG00000023620	MRM1	80	45.118	Panthera_pardus
ENSCVAG00000012104	mrm1	65	46.429	ENSPTIG00000009829	MRM1	88	47.059	Panthera_tigris_altaica
ENSCVAG00000012104	mrm1	72	46.996	ENSPTRG00000009049	MRM1	76	46.996	Pan_troglodytes
ENSCVAG00000012104	mrm1	72	46.996	ENSPANG00000022126	MRM1	76	46.996	Papio_anubis
ENSCVAG00000012104	mrm1	75	58.246	ENSPKIG00000007654	mrm1	78	58.042	Paramormyrops_kingsleyae
ENSCVAG00000012104	mrm1	70	46.763	ENSPSIG00000017622	MRM1	98	46.763	Pelodiscus_sinensis
ENSCVAG00000012104	mrm1	74	58.904	ENSPMGG00000003905	mrm1	87	58.904	Periophthalmus_magnuspinnatus
ENSCVAG00000012104	mrm1	53	40.000	ENSPMAG00000000484	mrm1	98	39.535	Petromyzon_marinus
ENSCVAG00000012104	mrm1	67	46.154	ENSPCIG00000003352	MRM1	68	46.154	Phascolarctos_cinereus
ENSCVAG00000012104	mrm1	100	66.146	ENSPFOG00000018234	mrm1	98	66.146	Poecilia_formosa
ENSCVAG00000012104	mrm1	100	71.615	ENSPLAG00000020759	mrm1	98	71.615	Poecilia_latipinna
ENSCVAG00000012104	mrm1	100	71.875	ENSPMEG00000021744	mrm1	98	71.875	Poecilia_mexicana
ENSCVAG00000012104	mrm1	92	75.072	ENSPREG00000013224	mrm1	96	75.072	Poecilia_reticulata
ENSCVAG00000012104	mrm1	72	39.223	ENSPCAG00000011756	MRM1	78	39.223	Procavia_capensis
ENSCVAG00000012104	mrm1	76	46.622	ENSPCOG00000020871	MRM1	85	46.622	Propithecus_coquereli
ENSCVAG00000012104	mrm1	67	40.840	ENSPVAG00000011626	MRM1	72	40.840	Pteropus_vampyrus
ENSCVAG00000012104	mrm1	72	69.176	ENSPNYG00000000528	mrm1	98	69.550	Pundamilia_nyererei
ENSCVAG00000012104	mrm1	74	56.314	ENSPNAG00000014551	mrm1	72	56.314	Pygocentrus_nattereri
ENSCVAG00000012104	mrm1	72	48.057	ENSRNOG00000027901	Mrm1	84	48.057	Rattus_norvegicus
ENSCVAG00000012104	mrm1	72	46.643	ENSRBIG00000040494	MRM1	76	46.643	Rhinopithecus_bieti
ENSCVAG00000012104	mrm1	72	46.643	ENSRROG00000041704	MRM1	77	46.643	Rhinopithecus_roxellana
ENSCVAG00000012104	mrm1	66	30.068	YOR201C	MRM1	69	30.068	Saccharomyces_cerevisiae
ENSCVAG00000012104	mrm1	72	45.230	ENSSBOG00000024145	MRM1	77	45.230	Saimiri_boliviensis_boliviensis
ENSCVAG00000012104	mrm1	88	53.687	ENSSFOG00015022117	mrm1	87	53.687	Scleropages_formosus
ENSCVAG00000012104	mrm1	75	67.014	ENSSMAG00000009657	mrm1	95	67.014	Scophthalmus_maximus
ENSCVAG00000012104	mrm1	97	60.052	ENSSDUG00000009089	mrm1	97	60.052	Seriola_dumerili
ENSCVAG00000012104	mrm1	91	63.248	ENSSLDG00000024141	mrm1	99	63.248	Seriola_lalandi_dorsalis
ENSCVAG00000012104	mrm1	75	44.932	ENSSPUG00000000265	MRM1	75	44.932	Sphenodon_punctatus
ENSCVAG00000012104	mrm1	66	46.332	ENSSSCG00000017691	MRM1	77	44.330	Sus_scrofa
ENSCVAG00000012104	mrm1	50	54.639	ENSTGUG00000008048	MRM1	98	54.639	Taeniopygia_guttata
ENSCVAG00000012104	mrm1	81	65.300	ENSTRUG00000011737	mrm1	84	65.300	Takifugu_rubripes
ENSCVAG00000012104	mrm1	97	56.250	ENSTNIG00000010088	mrm1	99	56.250	Tetraodon_nigroviridis
ENSCVAG00000012104	mrm1	53	41.627	ENSTBEG00000007237	-	90	41.627	Tupaia_belangeri
ENSCVAG00000012104	mrm1	77	43.564	ENSTTRG00000011984	MRM1	82	43.564	Tursiops_truncatus
ENSCVAG00000012104	mrm1	71	53.846	ENSUAMG00000023152	MRM1	85	45.848	Ursus_americanus
ENSCVAG00000012104	mrm1	74	45.423	ENSVVUG00000018420	MRM1	67	45.423	Vulpes_vulpes
ENSCVAG00000012104	mrm1	91	75.434	ENSXCOG00000003622	mrm1	97	75.434	Xiphophorus_couchianus
ENSCVAG00000012104	mrm1	93	75.989	ENSXMAG00000014890	mrm1	97	75.989	Xiphophorus_maculatus