EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000012145 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 8430 bases
Position: chrKL652637.1:1089283-1097712
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000026529	La	PF05383.17	1.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000016664	-	1155	-	ENSCVAP00000026513	384 (aa)	-	-
ENSCVAT00000016653	-	1164	-	ENSCVAP00000026529	387 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000012145's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000012145's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000012145	-	88	47.989	ENSAPOG00000003568	-	92	47.989	Acanthochromis_polyacanthus
ENSCVAG00000012145	-	89	47.899	ENSACIG00000008349	-	83	47.899	Amphilophus_citrinellus
ENSCVAG00000012145	-	93	49.868	ENSAOCG00000004646	larp6b	95	49.868	Amphiprion_ocellaris
ENSCVAG00000012145	-	88	51.657	ENSAPEG00000022748	-	90	51.657	Amphiprion_percula
ENSCVAG00000012145	-	89	48.468	ENSATEG00000021222	-	90	48.468	Anabas_testudineus
ENSCVAG00000012145	-	90	48.774	ENSACLG00000009988	larp6b	91	48.378	Astatotilapia_calliptera
ENSCVAG00000012145	-	77	42.439	ENSDARG00000003968	larp6b	50	58.209	Danio_rerio
ENSCVAG00000012145	-	84	33.000	ENSELUG00000021677	larp6b	83	33.000	Esox_lucius
ENSCVAG00000012145	-	90	69.801	ENSFHEG00000010409	-	83	69.801	Fundulus_heteroclitus
ENSCVAG00000012145	-	90	70.170	ENSGAFG00000020138	-	88	70.170	Gambusia_affinis
ENSCVAG00000012145	-	96	46.410	ENSHBUG00000012344	larp6b	96	46.056	Haplochromis_burtoni
ENSCVAG00000012145	-	88	48.732	ENSLBEG00000016460	-	97	48.603	Labrus_bergylta
ENSCVAG00000012145	-	88	50.278	ENSMAMG00000005509	-	88	50.278	Mastacembelus_armatus
ENSCVAG00000012145	-	90	48.649	ENSMZEG00005024390	larp6b	91	48.257	Maylandia_zebra
ENSCVAG00000012145	-	94	47.258	ENSNBRG00000012748	larp6b	95	47.258	Neolamprologus_brichardi
ENSCVAG00000012145	-	93	68.975	ENSPLAG00000005133	-	99	68.975	Poecilia_latipinna
ENSCVAG00000012145	-	92	69.167	ENSPMEG00000019947	-	99	69.167	Poecilia_mexicana
ENSCVAG00000012145	-	92	68.698	ENSPREG00000011853	-	89	68.698	Poecilia_reticulata
ENSCVAG00000012145	-	88	47.383	ENSPNYG00000007025	larp6b	86	46.995	Pundamilia_nyererei
ENSCVAG00000012145	-	68	53.309	ENSSDUG00000009842	-	88	50.842	Seriola_dumerili
ENSCVAG00000012145	-	89	50.000	ENSSLDG00000017081	-	85	49.728	Seriola_lalandi_dorsalis
ENSCVAG00000012145	-	88	49.046	ENSSPAG00000014320	-	90	48.800	Stegastes_partitus
ENSCVAG00000012145	-	97	67.460	ENSXCOG00000018917	-	99	67.460	Xiphophorus_couchianus
ENSCVAG00000012145	-	92	69.359	ENSXMAG00000025734	-	95	69.359	Xiphophorus_maculatus