EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000012169 (Gene tree)
Gene ID: -
Gene Symbol: rpp40
Alias: Rpp40|rpp40l|zgc:86704
Full Name: ribonuclease P/MRP subunit p40
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 5519 bases
Position: chrKL655072.1:15254-20772
Accession: 107080961
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000010098	Ribonuc_P_40	PF08584.11	2.5e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000029427	-	771	XM_015369171	ENSCVAP00000010098	256 (aa)	XP_015224657	-

Gene Model

Click here to download ENSCVAG00000012169's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000012169's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000012169	rpp40	100	33.094	ENSG00000124787	RPP40	89	33.094	Homo_sapiens
ENSCVAG00000012169	rpp40	84	60.000	ENSAPOG00000008660	rpp40	69	61.463	Acanthochromis_polyacanthus
ENSCVAG00000012169	rpp40	100	34.926	ENSAMEG00000012938	RPP40	74	34.926	Ailuropoda_melanoleuca
ENSCVAG00000012169	rpp40	100	54.297	ENSACIG00000003617	rpp40	72	53.516	Amphilophus_citrinellus
ENSCVAG00000012169	rpp40	100	59.004	ENSAOCG00000011846	rpp40	74	57.854	Amphiprion_ocellaris
ENSCVAG00000012169	rpp40	100	59.004	ENSAPEG00000001322	rpp40	74	57.854	Amphiprion_percula
ENSCVAG00000012169	rpp40	100	52.471	ENSATEG00000006584	rpp40	74	55.133	Anabas_testudineus
ENSCVAG00000012169	rpp40	100	34.982	ENSAPLG00000005691	RPP40	89	34.982	Anas_platyrhynchos
ENSCVAG00000012169	rpp40	99	32.841	ENSACAG00000006550	RPP40	66	32.841	Anolis_carolinensis
ENSCVAG00000012169	rpp40	100	32.472	ENSANAG00000029246	RPP40	76	32.472	Aotus_nancymaae
ENSCVAG00000012169	rpp40	98	55.469	ENSACLG00000015883	rpp40	71	54.688	Astatotilapia_calliptera
ENSCVAG00000012169	rpp40	100	42.701	ENSAMXG00000001755	rpp40	74	42.336	Astyanax_mexicanus
ENSCVAG00000012169	rpp40	100	35.055	ENSBTAG00000003332	RPP40	74	35.055	Bos_taurus
ENSCVAG00000012169	rpp40	100	33.210	ENSCJAG00000021373	RPP40	74	33.210	Callithrix_jacchus
ENSCVAG00000012169	rpp40	100	35.294	ENSCAFG00000009435	RPP40	74	35.294	Canis_familiaris
ENSCVAG00000012169	rpp40	100	35.294	ENSCAFG00020013380	RPP40	74	35.294	Canis_lupus_dingo
ENSCVAG00000012169	rpp40	100	35.294	ENSCHIG00000016849	RPP40	89	35.294	Capra_hircus
ENSCVAG00000012169	rpp40	100	33.579	ENSTSYG00000032857	RPP40	89	33.579	Carlito_syrichta
ENSCVAG00000012169	rpp40	100	34.926	ENSCAPG00000004957	RPP40	79	34.182	Cavia_aperea
ENSCVAG00000012169	rpp40	100	35.294	ENSCPOG00000005855	RPP40	74	35.294	Cavia_porcellus
ENSCVAG00000012169	rpp40	100	32.841	ENSCCAG00000019809	RPP40	74	32.841	Cebus_capucinus
ENSCVAG00000012169	rpp40	100	32.734	ENSCATG00000038787	RPP40	74	32.734	Cercocebus_atys
ENSCVAG00000012169	rpp40	100	35.055	ENSCLAG00000003235	RPP40	74	35.055	Chinchilla_lanigera
ENSCVAG00000012169	rpp40	100	32.734	ENSCSAG00000007307	RPP40	74	32.734	Chlorocebus_sabaeus
ENSCVAG00000012169	rpp40	100	34.559	ENSCPBG00000009003	RPP40	74	34.559	Chrysemys_picta_bellii
ENSCVAG00000012169	rpp40	100	33.094	ENSCANG00000033965	RPP40	74	33.094	Colobus_angolensis_palliatus
ENSCVAG00000012169	rpp40	100	31.618	ENSCGRG00001018328	Rpp40	74	31.618	Cricetulus_griseus_chok1gshd
ENSCVAG00000012169	rpp40	100	31.618	ENSCGRG00000011344	Rpp40	74	31.618	Cricetulus_griseus_crigri
ENSCVAG00000012169	rpp40	100	50.758	ENSCSEG00000015006	-	74	51.515	Cynoglossus_semilaevis
ENSCVAG00000012169	rpp40	100	43.273	ENSDARG00000017605	rpp40	75	42.545	Danio_rerio
ENSCVAG00000012169	rpp40	75	32.394	ENSDNOG00000048136	RPP40	68	32.394	Dasypus_novemcinctus
ENSCVAG00000012169	rpp40	100	33.094	ENSDORG00000029944	-	74	33.094	Dipodomys_ordii
ENSCVAG00000012169	rpp40	79	35.023	ENSETEG00000007458	RPP40	59	35.047	Echinops_telfairi
ENSCVAG00000012169	rpp40	99	33.457	ENSEBUG00000000386	rpp40	82	33.457	Eptatretus_burgeri
ENSCVAG00000012169	rpp40	100	34.432	ENSEASG00005012116	RPP40	59	34.432	Equus_asinus_asinus
ENSCVAG00000012169	rpp40	100	34.799	ENSECAG00000017247	RPP40	59	34.799	Equus_caballus
ENSCVAG00000012169	rpp40	75	32.524	ENSEEUG00000012087	RPP40	68	32.524	Erinaceus_europaeus
ENSCVAG00000012169	rpp40	100	43.636	ENSELUG00000017004	rpp40	75	42.909	Esox_lucius
ENSCVAG00000012169	rpp40	100	35.294	ENSFCAG00000009249	RPP40	74	35.294	Felis_catus
ENSCVAG00000012169	rpp40	100	34.589	ENSFALG00000013166	RPP40	87	34.589	Ficedula_albicollis
ENSCVAG00000012169	rpp40	100	34.559	ENSFDAG00000013001	-	74	34.173	Fukomys_damarensis
ENSCVAG00000012169	rpp40	100	65.900	ENSFHEG00000021429	rpp40	66	65.134	Fundulus_heteroclitus
ENSCVAG00000012169	rpp40	100	37.358	ENSGMOG00000018653	rpp40	60	45.122	Gadus_morhua
ENSCVAG00000012169	rpp40	100	34.532	ENSGALG00000036074	RPP40	74	34.532	Gallus_gallus
ENSCVAG00000012169	rpp40	100	49.248	ENSGAFG00000004189	-	88	49.248	Gambusia_affinis
ENSCVAG00000012169	rpp40	100	57.358	ENSGACG00000002472	rpp40	76	61.722	Gasterosteus_aculeatus
ENSCVAG00000012169	rpp40	100	35.294	ENSGAGG00000012918	RPP40	74	35.294	Gopherus_agassizii
ENSCVAG00000012169	rpp40	100	33.094	ENSGGOG00000013764	RPP40	74	33.094	Gorilla_gorilla
ENSCVAG00000012169	rpp40	100	51.351	ENSHBUG00000009378	rpp40	75	50.579	Haplochromis_burtoni
ENSCVAG00000012169	rpp40	100	33.948	ENSHGLG00000004871	RPP40	74	33.948	Heterocephalus_glaber_female
ENSCVAG00000012169	rpp40	100	33.948	ENSHGLG00100002080	RPP40	74	33.948	Heterocephalus_glaber_male
ENSCVAG00000012169	rpp40	97	44.444	ENSHCOG00000013264	-	69	41.603	Hippocampus_comes
ENSCVAG00000012169	rpp40	100	40.072	ENSIPUG00000008951	RPP40	75	40.072	Ictalurus_punctatus
ENSCVAG00000012169	rpp40	100	34.799	ENSSTOG00000011199	RPP40	74	34.409	Ictidomys_tridecemlineatus
ENSCVAG00000012169	rpp40	100	35.531	ENSJJAG00000020629	Rpp40	74	35.531	Jaculus_jaculus
ENSCVAG00000012169	rpp40	100	58.238	ENSKMAG00000019358	rpp40	74	57.471	Kryptolebias_marmoratus
ENSCVAG00000012169	rpp40	100	56.015	ENSLBEG00000022724	rpp40	74	55.263	Labrus_bergylta
ENSCVAG00000012169	rpp40	100	36.630	ENSLACG00000014848	RPP40	75	36.630	Latimeria_chalumnae
ENSCVAG00000012169	rpp40	100	37.868	ENSLOCG00000011650	rpp40	74	37.868	Lepisosteus_oculatus
ENSCVAG00000012169	rpp40	100	35.294	ENSLAFG00000007530	RPP40	89	35.294	Loxodonta_africana
ENSCVAG00000012169	rpp40	100	33.453	ENSMFAG00000043100	RPP40	74	33.453	Macaca_fascicularis
ENSCVAG00000012169	rpp40	100	33.453	ENSMMUG00000004966	RPP40	74	33.453	Macaca_mulatta
ENSCVAG00000012169	rpp40	100	32.734	ENSMNEG00000041986	RPP40	89	32.734	Macaca_nemestrina
ENSCVAG00000012169	rpp40	81	32.883	ENSMLEG00000040851	RPP40	71	33.023	Mandrillus_leucophaeus
ENSCVAG00000012169	rpp40	100	59.387	ENSMAMG00000019551	rpp40	73	58.621	Mastacembelus_armatus
ENSCVAG00000012169	rpp40	100	55.939	ENSMZEG00005019475	rpp40	73	55.172	Maylandia_zebra
ENSCVAG00000012169	rpp40	100	34.173	ENSMGAG00000004009	RPP40	75	34.173	Meleagris_gallopavo
ENSCVAG00000012169	rpp40	100	34.066	ENSMAUG00000010268	Rpp40	74	34.066	Mesocricetus_auratus
ENSCVAG00000012169	rpp40	100	35.897	ENSMICG00000003297	RPP40	68	35.897	Microcebus_murinus
ENSCVAG00000012169	rpp40	100	33.824	ENSMOCG00000000305	Rpp40	74	33.824	Microtus_ochrogaster
ENSCVAG00000012169	rpp40	100	55.469	ENSMMOG00000020591	-	80	54.688	Mola_mola
ENSCVAG00000012169	rpp40	100	32.616	ENSMODG00000009826	RPP40	74	32.616	Monodelphis_domestica
ENSCVAG00000012169	rpp40	100	58.238	ENSMALG00000020133	rpp40	84	57.471	Monopterus_albus
ENSCVAG00000012169	rpp40	100	34.799	MGP_CAROLIEiJ_G0018429	Rpp40	66	50.909	Mus_caroli
ENSCVAG00000012169	rpp40	100	33.579	ENSMUSG00000021418	Rpp40	65	50.909	Mus_musculus
ENSCVAG00000012169	rpp40	100	34.799	MGP_PahariEiJ_G0019497	Rpp40	66	50.909	Mus_pahari
ENSCVAG00000012169	rpp40	100	34.559	MGP_SPRETEiJ_G0019309	Rpp40	66	50.909	Mus_spretus
ENSCVAG00000012169	rpp40	100	34.926	ENSMPUG00000000530	RPP40	69	34.926	Mustela_putorius_furo
ENSCVAG00000012169	rpp40	100	34.317	ENSMLUG00000000501	RPP40	74	34.317	Myotis_lucifugus
ENSCVAG00000012169	rpp40	100	35.294	ENSNGAG00000023955	-	74	35.294	Nannospalax_galili
ENSCVAG00000012169	rpp40	93	34.866	ENSNGAG00000022529	-	79	34.866	Nannospalax_galili
ENSCVAG00000012169	rpp40	80	60.664	ENSNBRG00000017465	rpp40	60	60.976	Neolamprologus_brichardi
ENSCVAG00000012169	rpp40	100	32.841	ENSNLEG00000034397	RPP40	74	32.841	Nomascus_leucogenys
ENSCVAG00000012169	rpp40	84	34.052	ENSMEUG00000005300	RPP40	60	34.722	Notamacropus_eugenii
ENSCVAG00000012169	rpp40	100	33.955	ENSODEG00000018153	-	73	33.955	Octodon_degus
ENSCVAG00000012169	rpp40	86	34.746	ENSODEG00000006170	-	72	35.814	Octodon_degus
ENSCVAG00000012169	rpp40	100	35.424	ENSODEG00000007255	-	74	35.424	Octodon_degus
ENSCVAG00000012169	rpp40	100	55.556	ENSONIG00000014016	rpp40	73	54.789	Oreochromis_niloticus
ENSCVAG00000012169	rpp40	100	34.420	ENSOANG00000001200	RPP40	89	34.420	Ornithorhynchus_anatinus
ENSCVAG00000012169	rpp40	99	33.696	ENSOCUG00000000354	RPP40	74	33.696	Oryctolagus_cuniculus
ENSCVAG00000012169	rpp40	100	50.579	ENSORLG00000008242	-	74	52.510	Oryzias_latipes
ENSCVAG00000012169	rpp40	100	50.579	ENSORLG00020013745	-	67	52.510	Oryzias_latipes_hni
ENSCVAG00000012169	rpp40	100	50.193	ENSORLG00015000887	-	74	52.124	Oryzias_latipes_hsok
ENSCVAG00000012169	rpp40	100	52.510	ENSOMEG00000002747	rpp40	74	51.737	Oryzias_melastigma
ENSCVAG00000012169	rpp40	100	34.317	ENSOGAG00000006055	RPP40	74	34.317	Otolemur_garnettii
ENSCVAG00000012169	rpp40	100	35.662	ENSOARG00000018783	RPP40	89	35.662	Ovis_aries
ENSCVAG00000012169	rpp40	100	33.453	ENSPPAG00000023703	RPP40	74	33.453	Pan_paniscus
ENSCVAG00000012169	rpp40	100	35.294	ENSPPRG00000005612	RPP40	74	35.294	Panthera_pardus
ENSCVAG00000012169	rpp40	100	30.970	ENSPTIG00000018847	RPP40	74	30.970	Panthera_tigris_altaica
ENSCVAG00000012169	rpp40	100	33.453	ENSPTRG00000017690	RPP40	74	33.453	Pan_troglodytes
ENSCVAG00000012169	rpp40	100	33.094	ENSPANG00000017865	RPP40	74	33.094	Papio_anubis
ENSCVAG00000012169	rpp40	100	40.876	ENSPKIG00000006311	rpp40	74	40.146	Paramormyrops_kingsleyae
ENSCVAG00000012169	rpp40	80	36.073	ENSPSIG00000007854	RPP40	97	36.744	Pelodiscus_sinensis
ENSCVAG00000012169	rpp40	92	32.171	ENSPEMG00000020809	Rpp40	77	32.171	Peromyscus_maniculatus_bairdii
ENSCVAG00000012169	rpp40	99	34.559	ENSPMAG00000008412	rpp40	97	34.559	Petromyzon_marinus
ENSCVAG00000012169	rpp40	100	33.813	ENSPCIG00000010682	RPP40	74	33.813	Phascolarctos_cinereus
ENSCVAG00000012169	rpp40	100	60.300	ENSPFOG00000011460	rpp40	73	60.300	Poecilia_formosa
ENSCVAG00000012169	rpp40	100	59.004	ENSPLAG00000001334	rpp40	74	59.004	Poecilia_latipinna
ENSCVAG00000012169	rpp40	100	60.536	ENSPMEG00000007721	rpp40	74	60.536	Poecilia_mexicana
ENSCVAG00000012169	rpp40	100	60.536	ENSPREG00000009215	rpp40	74	60.536	Poecilia_reticulata
ENSCVAG00000012169	rpp40	100	33.094	ENSPPYG00000016194	RPP40	74	33.094	Pongo_abelii
ENSCVAG00000012169	rpp40	100	35.531	ENSPCOG00000003907	RPP40	74	35.531	Propithecus_coquereli
ENSCVAG00000012169	rpp40	100	34.532	ENSPVAG00000011325	RPP40	74	34.532	Pteropus_vampyrus
ENSCVAG00000012169	rpp40	98	52.157	ENSPNYG00000004432	rpp40	88	51.373	Pundamilia_nyererei
ENSCVAG00000012169	rpp40	100	41.818	ENSPNAG00000019125	rpp40	75	41.091	Pygocentrus_nattereri
ENSCVAG00000012169	rpp40	100	34.432	ENSRNOG00000016226	Rpp40	89	34.050	Rattus_norvegicus
ENSCVAG00000012169	rpp40	100	32.374	ENSRBIG00000035800	RPP40	89	32.734	Rhinopithecus_bieti
ENSCVAG00000012169	rpp40	100	32.374	ENSRROG00000039116	RPP40	74	32.734	Rhinopithecus_roxellana
ENSCVAG00000012169	rpp40	100	33.453	ENSSBOG00000020297	RPP40	74	33.453	Saimiri_boliviensis_boliviensis
ENSCVAG00000012169	rpp40	100	34.767	ENSSHAG00000002102	RPP40	97	34.767	Sarcophilus_harrisii
ENSCVAG00000012169	rpp40	100	43.704	ENSSFOG00015001142	rpp40	60	43.333	Scleropages_formosus
ENSCVAG00000012169	rpp40	100	57.143	ENSSDUG00000007202	rpp40	74	56.391	Seriola_dumerili
ENSCVAG00000012169	rpp40	100	57.143	ENSSLDG00000017563	rpp40	74	56.391	Seriola_lalandi_dorsalis
ENSCVAG00000012169	rpp40	99	34.201	ENSSPUG00000018950	-	90	34.201	Sphenodon_punctatus
ENSCVAG00000012169	rpp40	100	35.484	ENSSPUG00000017487	-	74	35.484	Sphenodon_punctatus
ENSCVAG00000012169	rpp40	100	59.387	ENSSPAG00000022716	rpp40	74	58.238	Stegastes_partitus
ENSCVAG00000012169	rpp40	100	35.424	ENSSSCG00000000998	RPP40	89	35.424	Sus_scrofa
ENSCVAG00000012169	rpp40	100	34.532	ENSTGUG00000002258	-	75	34.532	Taeniopygia_guttata
ENSCVAG00000012169	rpp40	59	40.120	ENSTGUG00000015246	-	94	39.521	Taeniopygia_guttata
ENSCVAG00000012169	rpp40	100	54.135	ENSTRUG00000003755	rpp40	74	53.383	Takifugu_rubripes
ENSCVAG00000012169	rpp40	100	54.104	ENSTNIG00000003077	rpp40	74	54.104	Tetraodon_nigroviridis
ENSCVAG00000012169	rpp40	84	34.632	ENSTTRG00000007319	RPP40	59	35.814	Tursiops_truncatus
ENSCVAG00000012169	rpp40	100	34.559	ENSUAMG00000002159	RPP40	89	34.559	Ursus_americanus
ENSCVAG00000012169	rpp40	100	34.559	ENSUMAG00000018639	RPP40	70	34.559	Ursus_maritimus
ENSCVAG00000012169	rpp40	100	34.559	ENSVVUG00000005451	RPP40	74	34.559	Vulpes_vulpes
ENSCVAG00000012169	rpp40	100	36.000	ENSXETG00000017617	rpp40	75	35.587	Xenopus_tropicalis
ENSCVAG00000012169	rpp40	72	50.532	ENSXMAG00000024940	rpp40	56	50.532	Xiphophorus_maculatus