EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000012202 (Gene tree)
Gene ID: 107088715
Gene Symbol: rc3h2
Alias: si:ch211-243g18.1
Full Name: ring finger and CCCH-type domains 2
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 37021 bases
Position: chrKL652727.1:292044-329064
Accession: 107088715
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000026538	zf-CCCH	PF00642.24	5.9e-06	1	1
ENSCVAP00000026557	zf-CCCH	PF00642.24	5.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000016701	-	7821	XM_015381061	ENSCVAP00000026538	1118 (aa)	XP_015236547	UPI0007428D80
ENSCVAT00000016723	-	8146	XM_015381062	ENSCVAP00000026557	1118 (aa)	XP_015236548	UPI0007428D80

Gene Model

Click here to download ENSCVAG00000012202's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000012202's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000012202	rc3h2	90	56.901	ENSG00000056586	RC3H2	94	86.192	Homo_sapiens
ENSCVAG00000012202	rc3h2	100	80.519	ENSAPOG00000002117	rc3h2	99	81.732	Acanthochromis_polyacanthus
ENSCVAG00000012202	rc3h2	91	56.025	ENSAMEG00000006498	RC3H2	91	56.065	Ailuropoda_melanoleuca
ENSCVAG00000012202	rc3h2	100	80.763	ENSAPEG00000007757	rc3h2	99	81.889	Amphiprion_percula
ENSCVAG00000012202	rc3h2	100	78.788	ENSATEG00000019414	rc3h2	99	78.788	Anabas_testudineus
ENSCVAG00000012202	rc3h2	91	56.177	ENSAPLG00000013920	RC3H2	91	56.526	Anas_platyrhynchos
ENSCVAG00000012202	rc3h2	91	55.486	ENSANAG00000030862	RC3H2	94	86.192	Aotus_nancymaae
ENSCVAG00000012202	rc3h2	100	78.179	ENSACLG00000023136	rc3h2	99	78.522	Astatotilapia_calliptera
ENSCVAG00000012202	rc3h2	100	60.088	ENSAMXG00000006778	rc3h2	99	66.748	Astyanax_mexicanus
ENSCVAG00000012202	rc3h2	91	56.216	ENSBTAG00000023867	RC3H2	91	56.256	Bos_taurus
ENSCVAG00000012202	rc3h2	91	55.486	ENSCJAG00000020050	RC3H2	94	86.192	Callithrix_jacchus
ENSCVAG00000012202	rc3h2	91	55.946	ENSCAFG00020015288	RC3H2	94	86.192	Canis_lupus_dingo
ENSCVAG00000012202	rc3h2	91	57.183	ENSCHIG00000019319	RC3H2	90	57.223	Capra_hircus
ENSCVAG00000012202	rc3h2	84	50.643	ENSCAPG00000017086	RC3H2	93	50.841	Cavia_aperea
ENSCVAG00000012202	rc3h2	91	56.087	ENSCPOG00000008511	RC3H2	91	56.486	Cavia_porcellus
ENSCVAG00000012202	rc3h2	91	56.996	ENSCCAG00000001404	RC3H2	94	86.192	Cebus_capucinus
ENSCVAG00000012202	rc3h2	91	55.576	ENSCATG00000036655	RC3H2	94	86.192	Cercocebus_atys
ENSCVAG00000012202	rc3h2	91	55.996	ENSCLAG00000013261	RC3H2	91	56.396	Chinchilla_lanigera
ENSCVAG00000012202	rc3h2	80	53.001	ENSCSAG00000013416	RC3H2	90	53.049	Chlorocebus_sabaeus
ENSCVAG00000012202	rc3h2	91	56.352	ENSCPBG00000009811	RC3H2	91	56.431	Chrysemys_picta_bellii
ENSCVAG00000012202	rc3h2	91	55.576	ENSCANG00000043140	RC3H2	94	86.192	Colobus_angolensis_palliatus
ENSCVAG00000012202	rc3h2	92	55.615	ENSCGRG00001010006	Rc3h2	91	56.216	Cricetulus_griseus_chok1gshd
ENSCVAG00000012202	rc3h2	82	61.974	ENSCGRG00000009255	Rc3h2	77	62.094	Cricetulus_griseus_crigri
ENSCVAG00000012202	rc3h2	100	75.128	ENSCSEG00000017460	rc3h2	99	75.235	Cynoglossus_semilaevis
ENSCVAG00000012202	rc3h2	100	60.980	ENSDARG00000063050	rc3h2	100	61.384	Danio_rerio
ENSCVAG00000012202	rc3h2	91	55.766	ENSDNOG00000014557	RC3H2	91	56.025	Dasypus_novemcinctus
ENSCVAG00000012202	rc3h2	92	55.704	ENSDORG00000006398	Rc3h2	91	56.306	Dipodomys_ordii
ENSCVAG00000012202	rc3h2	91	55.855	ENSEASG00005020897	RC3H2	94	82.628	Equus_asinus_asinus
ENSCVAG00000012202	rc3h2	91	56.036	ENSECAG00000022176	RC3H2	91	56.076	Equus_caballus
ENSCVAG00000012202	rc3h2	100	67.246	ENSELUG00000006105	rc3h2	99	66.580	Esox_lucius
ENSCVAG00000012202	rc3h2	91	56.126	ENSFCAG00000007375	RC3H2	91	56.166	Felis_catus
ENSCVAG00000012202	rc3h2	91	56.177	ENSFALG00000002011	RC3H2	91	56.526	Ficedula_albicollis
ENSCVAG00000012202	rc3h2	91	55.906	ENSFDAG00000012477	RC3H2	91	56.216	Fukomys_damarensis
ENSCVAG00000012202	rc3h2	100	89.581	ENSFHEG00000012272	rc3h2	100	89.849	Fundulus_heteroclitus
ENSCVAG00000012202	rc3h2	67	67.310	ENSGMOG00000016709	-	99	67.310	Gadus_morhua
ENSCVAG00000012202	rc3h2	91	56.537	ENSGALG00000001253	RC3H2	91	56.886	Gallus_gallus
ENSCVAG00000012202	rc3h2	96	89.674	ENSGAFG00000007679	rc3h2	100	89.488	Gambusia_affinis
ENSCVAG00000012202	rc3h2	73	74.884	ENSGACG00000017369	rc3h2	100	94.796	Gasterosteus_aculeatus
ENSCVAG00000012202	rc3h2	91	56.364	ENSGAGG00000018295	RC3H2	98	56.312	Gopherus_agassizii
ENSCVAG00000012202	rc3h2	91	55.576	ENSGGOG00000017062	RC3H2	94	86.192	Gorilla_gorilla
ENSCVAG00000012202	rc3h2	100	79.322	ENSHBUG00000003976	rc3h2	99	79.670	Haplochromis_burtoni
ENSCVAG00000012202	rc3h2	91	56.076	ENSHGLG00100018015	RC3H2	91	56.385	Heterocephalus_glaber_male
ENSCVAG00000012202	rc3h2	100	70.000	ENSHCOG00000003006	rc3h2	99	69.836	Hippocampus_comes
ENSCVAG00000012202	rc3h2	100	59.627	ENSIPUG00000021433	rc3h2	100	60.000	Ictalurus_punctatus
ENSCVAG00000012202	rc3h2	91	55.996	ENSSTOG00000010655	RC3H2	91	56.306	Ictidomys_tridecemlineatus
ENSCVAG00000012202	rc3h2	91	55.726	ENSJJAG00000022376	Rc3h2	91	56.036	Jaculus_jaculus
ENSCVAG00000012202	rc3h2	100	81.609	ENSKMAG00000010936	rc3h2	99	81.344	Kryptolebias_marmoratus
ENSCVAG00000012202	rc3h2	100	57.056	ENSLOCG00000002894	rc3h2	100	56.537	Lepisosteus_oculatus
ENSCVAG00000012202	rc3h2	91	56.306	ENSLAFG00000003521	RC3H2	91	56.565	Loxodonta_africana
ENSCVAG00000012202	rc3h2	86	85.973	ENSMFAG00000035621	RC3H2	94	86.192	Macaca_fascicularis
ENSCVAG00000012202	rc3h2	91	55.586	ENSMMUG00000021134	RC3H2	94	86.192	Macaca_mulatta
ENSCVAG00000012202	rc3h2	91	55.576	ENSMNEG00000031599	RC3H2	94	83.964	Macaca_nemestrina
ENSCVAG00000012202	rc3h2	91	55.676	ENSMLEG00000033809	RC3H2	94	86.192	Mandrillus_leucophaeus
ENSCVAG00000012202	rc3h2	100	79.322	ENSMZEG00005017019	rc3h2	99	79.670	Maylandia_zebra
ENSCVAG00000012202	rc3h2	91	56.256	ENSMGAG00000007984	RC3H2	91	56.604	Meleagris_gallopavo
ENSCVAG00000012202	rc3h2	72	61.960	ENSMAUG00000003117	Rc3h2	81	61.960	Mesocricetus_auratus
ENSCVAG00000012202	rc3h2	91	55.925	ENSMICG00000003227	RC3H2	94	85.969	Microcebus_murinus
ENSCVAG00000012202	rc3h2	91	55.495	ENSMOCG00000009592	Rc3h2	91	55.856	Microtus_ochrogaster
ENSCVAG00000012202	rc3h2	91	68.798	ENSMMOG00000021305	rc3h2	99	69.561	Mola_mola
ENSCVAG00000012202	rc3h2	91	56.076	ENSMODG00000019725	RC3H2	76	56.424	Monodelphis_domestica
ENSCVAG00000012202	rc3h2	91	57.103	MGP_CAROLIEiJ_G0023516	Rc3h2	96	84.749	Mus_caroli
ENSCVAG00000012202	rc3h2	91	56.227	ENSMUSG00000075376	Rc3h2	96	84.749	Mus_musculus
ENSCVAG00000012202	rc3h2	91	56.177	MGP_PahariEiJ_G0024969	Rc3h2	96	84.749	Mus_pahari
ENSCVAG00000012202	rc3h2	91	56.137	MGP_SPRETEiJ_G0024436	Rc3h2	96	84.749	Mus_spretus
ENSCVAG00000012202	rc3h2	91	55.766	ENSMPUG00000014141	RC3H2	91	55.896	Mustela_putorius_furo
ENSCVAG00000012202	rc3h2	91	56.486	ENSMLUG00000013992	RC3H2	91	56.346	Myotis_lucifugus
ENSCVAG00000012202	rc3h2	100	79.496	ENSNBRG00000009276	rc3h2	99	79.844	Neolamprologus_brichardi
ENSCVAG00000012202	rc3h2	91	54.766	ENSNLEG00000017204	RC3H2	94	86.192	Nomascus_leucogenys
ENSCVAG00000012202	rc3h2	53	85.771	ENSMEUG00000001299	-	55	85.771	Notamacropus_eugenii
ENSCVAG00000012202	rc3h2	67	56.439	ENSOPRG00000000135	RC3H2	74	56.533	Ochotona_princeps
ENSCVAG00000012202	rc3h2	100	78.780	ENSONIG00000003945	rc3h2	99	79.124	Oreochromis_niloticus
ENSCVAG00000012202	rc3h2	90	56.727	ENSOANG00000008194	RC3H2	99	56.612	Ornithorhynchus_anatinus
ENSCVAG00000012202	rc3h2	91	55.816	ENSOCUG00000008804	RC3H2	91	56.036	Oryctolagus_cuniculus
ENSCVAG00000012202	rc3h2	100	76.609	ENSORLG00000010018	rc3h2	99	76.348	Oryzias_latipes
ENSCVAG00000012202	rc3h2	100	76.957	ENSORLG00020013257	rc3h2	99	76.696	Oryzias_latipes_hni
ENSCVAG00000012202	rc3h2	100	76.783	ENSORLG00015001525	rc3h2	99	76.522	Oryzias_latipes_hsok
ENSCVAG00000012202	rc3h2	100	77.951	ENSOMEG00000023540	rc3h2	99	77.691	Oryzias_melastigma
ENSCVAG00000012202	rc3h2	91	55.935	ENSOGAG00000010678	RC3H2	91	55.885	Otolemur_garnettii
ENSCVAG00000012202	rc3h2	91	56.025	ENSOARG00000013965	RC3H2	91	56.065	Ovis_aries
ENSCVAG00000012202	rc3h2	91	55.576	ENSPPAG00000036013	RC3H2	94	86.192	Pan_paniscus
ENSCVAG00000012202	rc3h2	90	57.371	ENSPPRG00000008698	RC3H2	97	57.411	Panthera_pardus
ENSCVAG00000012202	rc3h2	90	57.371	ENSPTIG00000014257	RC3H2	97	57.411	Panthera_tigris_altaica
ENSCVAG00000012202	rc3h2	91	55.576	ENSPTRG00000021339	RC3H2	94	86.192	Pan_troglodytes
ENSCVAG00000012202	rc3h2	91	54.137	ENSPANG00000025840	RC3H2	94	82.628	Papio_anubis
ENSCVAG00000012202	rc3h2	100	64.386	ENSPKIG00000021910	rc3h2	96	64.123	Paramormyrops_kingsleyae
ENSCVAG00000012202	rc3h2	91	56.357	ENSPSIG00000005393	RC3H2	91	56.436	Pelodiscus_sinensis
ENSCVAG00000012202	rc3h2	87	93.002	ENSPMGG00000023963	rc3h2	94	93.454	Periophthalmus_magnuspinnatus
ENSCVAG00000012202	rc3h2	91	55.726	ENSPEMG00000023441	Rc3h2	91	56.244	Peromyscus_maniculatus_bairdii
ENSCVAG00000012202	rc3h2	91	56.166	ENSPCIG00000025559	RC3H2	91	56.334	Phascolarctos_cinereus
ENSCVAG00000012202	rc3h2	97	88.838	ENSPFOG00000019699	rc3h2	98	88.655	Poecilia_formosa
ENSCVAG00000012202	rc3h2	96	78.333	ENSPLAG00000005799	rc3h2	97	78.333	Poecilia_latipinna
ENSCVAG00000012202	rc3h2	97	88.838	ENSPMEG00000014187	rc3h2	97	88.714	Poecilia_mexicana
ENSCVAG00000012202	rc3h2	100	89.127	ENSPREG00000008979	rc3h2	100	88.948	Poecilia_reticulata
ENSCVAG00000012202	rc3h2	77	73.913	ENSPCAG00000010154	RC3H2	77	73.913	Procavia_capensis
ENSCVAG00000012202	rc3h2	100	78.436	ENSPNYG00000012063	rc3h2	99	78.780	Pundamilia_nyererei
ENSCVAG00000012202	rc3h2	96	62.009	ENSPNAG00000017502	rc3h2	96	61.783	Pygocentrus_nattereri
ENSCVAG00000012202	rc3h2	91	56.244	ENSRNOG00000009196	Rc3h2	94	56.604	Rattus_norvegicus
ENSCVAG00000012202	rc3h2	90	57.089	ENSRBIG00000032579	RC3H2	94	86.192	Rhinopithecus_bieti
ENSCVAG00000012202	rc3h2	91	55.766	ENSRROG00000043784	RC3H2	94	86.192	Rhinopithecus_roxellana
ENSCVAG00000012202	rc3h2	90	57.293	ENSSBOG00000029100	RC3H2	94	86.192	Saimiri_boliviensis_boliviensis
ENSCVAG00000012202	rc3h2	91	56.155	ENSSHAG00000007498	RC3H2	91	56.323	Sarcophilus_harrisii
ENSCVAG00000012202	rc3h2	100	78.806	ENSSMAG00000020048	rc3h2	99	79.239	Scophthalmus_maximus
ENSCVAG00000012202	rc3h2	100	80.294	ENSSDUG00000016022	rc3h2	99	80.899	Seriola_dumerili
ENSCVAG00000012202	rc3h2	100	80.207	ENSSLDG00000016070	rc3h2	99	80.812	Seriola_lalandi_dorsalis
ENSCVAG00000012202	rc3h2	91	55.135	ENSSARG00000012329	RC3H2	91	55.176	Sorex_araneus
ENSCVAG00000012202	rc3h2	91	55.896	ENSSPUG00000001457	RC3H2	91	56.155	Sphenodon_punctatus
ENSCVAG00000012202	rc3h2	100	80.553	ENSSPAG00000005233	rc3h2	99	81.590	Stegastes_partitus
ENSCVAG00000012202	rc3h2	91	55.806	ENSSSCG00000005575	RC3H2	92	85.969	Sus_scrofa
ENSCVAG00000012202	rc3h2	91	56.087	ENSTGUG00000006889	-	91	56.436	Taeniopygia_guttata
ENSCVAG00000012202	rc3h2	85	72.279	ENSTNIG00000004942	rc3h2	98	72.054	Tetraodon_nigroviridis
ENSCVAG00000012202	rc3h2	70	62.255	ENSTBEG00000009622	RC3H2	77	62.546	Tupaia_belangeri
ENSCVAG00000012202	rc3h2	86	66.225	ENSTTRG00000016954	RC3H2	84	66.711	Tursiops_truncatus
ENSCVAG00000012202	rc3h2	91	56.036	ENSUAMG00000015355	RC3H2	91	56.256	Ursus_americanus
ENSCVAG00000012202	rc3h2	91	56.036	ENSUMAG00000003161	RC3H2	94	86.192	Ursus_maritimus
ENSCVAG00000012202	rc3h2	91	55.845	ENSVPAG00000005994	RC3H2	91	55.975	Vicugna_pacos
ENSCVAG00000012202	rc3h2	91	55.946	ENSVVUG00000009519	RC3H2	94	55.986	Vulpes_vulpes
ENSCVAG00000012202	rc3h2	100	89.652	ENSXMAG00000001724	rc3h2	100	89.474	Xiphophorus_maculatus