EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000012268 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 4184 bases
Position: chrKL655060.1:13714-17897
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000026596	MMR_HSR1	PF01926.23	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000016801	-	1464	-	ENSCVAP00000026596	303 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000012268's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000012268's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000012268	-	66	34.634	ENSCVAG00000003277	-	94	34.634
ENSCVAG00000012268	-	66	33.171	ENSCVAG00000005487	-	60	33.990
ENSCVAG00000012268	-	75	33.772	ENSCVAG00000007454	-	88	33.772
ENSCVAG00000012268	-	75	36.327	ENSCVAG00000009387	-	73	36.327
ENSCVAG00000012268	-	78	35.565	ENSCVAG00000003300	-	65	35.565
ENSCVAG00000012268	-	73	34.222	ENSCVAG00000003302	-	81	34.222
ENSCVAG00000012268	-	65	35.500	ENSCVAG00000011321	-	92	32.487
ENSCVAG00000012268	-	66	34.804	ENSCVAG00000018895	-	92	34.804
ENSCVAG00000012268	-	57	33.146	ENSCVAG00000004890	-	71	33.146
ENSCVAG00000012268	-	63	36.181	ENSCVAG00000014872	-	81	35.714
ENSCVAG00000012268	-	60	30.220	ENSCVAG00000014831	-	76	30.220
ENSCVAG00000012268	-	62	34.737	ENSCVAG00000004881	-	67	32.618
ENSCVAG00000012268	-	62	32.804	ENSCVAG00000021672	-	91	32.804
ENSCVAG00000012268	-	74	33.921	ENSCVAG00000010264	-	59	33.921
ENSCVAG00000012268	-	67	34.483	ENSCVAG00000000740	-	60	34.071
ENSCVAG00000012268	-	72	32.328	ENSCVAG00000002876	-	79	32.328
ENSCVAG00000012268	-	63	30.435	ENSCVAG00000005688	-	65	30.435
ENSCVAG00000012268	-	78	35.537	ENSCVAG00000005473	-	81	35.537
ENSCVAG00000012268	-	65	34.500	ENSCVAG00000009295	-	81	34.500
ENSCVAG00000012268	-	66	33.659	ENSCVAG00000001601	-	92	31.381
ENSCVAG00000012268	-	90	32.870	ENSCVAG00000018802	-	84	33.796
ENSCVAG00000012268	-	69	34.101	ENSCVAG00000021126	-	74	33.945
ENSCVAG00000012268	-	68	32.243	ENSCVAG00000007463	-	80	31.020
ENSCVAG00000012268	-	66	33.824	ENSCVAG00000009808	-	85	33.824
ENSCVAG00000012268	-	64	35.354	ENSCVAG00000001617	-	80	35.000
ENSCVAG00000012268	-	61	33.673	ENSCVAG00000015817	-	61	33.673
ENSCVAG00000012268	-	60	39.362	ENSCVAG00000013717	-	83	39.362
ENSCVAG00000012268	-	86	30.739	ENSCVAG00000018793	-	58	30.739
ENSCVAG00000012268	-	66	31.132	ENSCVAG00000005762	-	70	31.132
ENSCVAG00000012268	-	67	61.463	ENSCVAG00000005778	-	71	61.463
ENSCVAG00000012268	-	66	33.163	ENSCVAG00000015638	-	78	33.163
ENSCVAG00000012268	-	78	31.687	ENSCVAG00000010232	-	86	31.687
ENSCVAG00000012268	-	63	31.841	ENSCVAG00000009944	-	58	31.841
ENSCVAG00000012268	-	65	35.500	ENSCVAG00000007737	-	88	35.500
ENSCVAG00000012268	-	76	35.433	ENSCVAG00000000429	-	78	35.433
ENSCVAG00000012268	-	75	30.290	ENSCVAG00000005709	-	66	30.290
ENSCVAG00000012268	-	63	36.500	ENSCVAG00000007827	-	71	36.500
ENSCVAG00000012268	-	65	36.139	ENSCVAG00000018876	-	91	36.139
ENSCVAG00000012268	-	67	35.981	ENSCVAG00000023285	-	82	35.981
ENSCVAG00000012268	-	70	33.790	ENSCVAG00000017209	-	60	33.333
ENSCVAG00000012268	-	52	35.976	ENSCVAG00000009848	-	79	35.976
ENSCVAG00000012268	-	56	34.118	ENSCVAG00000019639	-	84	34.118
ENSCVAG00000012268	-	69	33.032	ENSCVAG00000020148	-	54	33.032
ENSCVAG00000012268	-	66	35.149	ENSCVAG00000004346	-	83	35.149
ENSCVAG00000012268	-	75	30.290	ENSCVAG00000009937	-	66	30.290
ENSCVAG00000012268	-	66	35.437	ENSCVAG00000009825	-	72	35.437
ENSCVAG00000012268	-	82	38.824	ENSCVAG00000003054	-	85	38.824
ENSCVAG00000012268	-	70	33.641	ENSCVAG00000023434	-	79	33.641
ENSCVAG00000012268	-	62	37.368	ENSCVAG00000018769	-	82	37.368
ENSCVAG00000012268	-	70	35.945	ENSCVAG00000009854	-	68	35.945

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000012268	-	99	35.599	ENSAPOG00000006502	-	60	35.599	Acanthochromis_polyacanthus
ENSCVAG00000012268	-	94	38.491	ENSAPOG00000019154	-	58	38.491	Acanthochromis_polyacanthus
ENSCVAG00000012268	-	76	41.126	ENSACIG00000007725	-	81	41.126	Amphilophus_citrinellus
ENSCVAG00000012268	-	67	37.981	ENSACIG00000009811	-	85	37.981	Amphilophus_citrinellus
ENSCVAG00000012268	-	60	38.462	ENSACIG00000007737	-	70	39.362	Amphilophus_citrinellus
ENSCVAG00000012268	-	96	45.575	ENSAOCG00000004579	-	85	49.490	Amphiprion_ocellaris
ENSCVAG00000012268	-	60	39.130	ENSAOCG00000003425	-	67	39.130	Amphiprion_ocellaris
ENSCVAG00000012268	-	94	42.051	ENSAPEG00000014403	-	74	44.615	Amphiprion_percula
ENSCVAG00000012268	-	98	36.667	ENSAPEG00000001491	-	69	36.667	Amphiprion_percula
ENSCVAG00000012268	-	94	47.087	ENSATEG00000015654	-	81	44.635	Anabas_testudineus
ENSCVAG00000012268	-	73	37.557	ENSATEG00000023053	-	92	37.557	Anabas_testudineus
ENSCVAG00000012268	-	97	43.668	ENSACLG00000014795	-	76	43.668	Astatotilapia_calliptera
ENSCVAG00000012268	-	59	40.000	ENSAMXG00000026085	-	83	37.229	Astyanax_mexicanus
ENSCVAG00000012268	-	99	42.333	ENSAMXG00000019109	-	99	42.333	Astyanax_mexicanus
ENSCVAG00000012268	-	94	36.364	ENSAMXG00000033117	-	94	34.667	Astyanax_mexicanus
ENSCVAG00000012268	-	63	34.171	ENSAMXG00000009216	-	94	34.171	Astyanax_mexicanus
ENSCVAG00000012268	-	96	36.759	ENSAMXG00000006064	-	77	36.759	Astyanax_mexicanus
ENSCVAG00000012268	-	97	38.521	ENSAMXG00000021387	-	68	38.521	Astyanax_mexicanus
ENSCVAG00000012268	-	95	44.061	ENSAMXG00000030744	-	89	42.500	Astyanax_mexicanus
ENSCVAG00000012268	-	98	34.106	ENSCSEG00000021519	-	80	49.057	Cynoglossus_semilaevis
ENSCVAG00000012268	-	96	43.295	ENSDARG00000063481	si:ch211-214j24.15	67	43.295	Danio_rerio
ENSCVAG00000012268	-	64	40.102	ENSDARG00000102683	CR626941.1	73	40.102	Danio_rerio
ENSCVAG00000012268	-	60	51.630	ENSELUG00000024502	-	66	51.630	Esox_lucius
ENSCVAG00000012268	-	62	40.426	ENSELUG00000018709	-	56	40.426	Esox_lucius
ENSCVAG00000012268	-	66	34.328	ENSELUG00000003217	-	83	34.328	Esox_lucius
ENSCVAG00000012268	-	69	47.867	ENSELUG00000018192	-	97	47.867	Esox_lucius
ENSCVAG00000012268	-	64	38.462	ENSFHEG00000020783	-	82	38.462	Fundulus_heteroclitus
ENSCVAG00000012268	-	71	41.553	ENSFHEG00000023334	-	83	41.553	Fundulus_heteroclitus
ENSCVAG00000012268	-	63	40.704	ENSGMOG00000001626	-	99	42.623	Gadus_morhua
ENSCVAG00000012268	-	82	34.409	ENSGAFG00000020826	-	96	34.409	Gambusia_affinis
ENSCVAG00000012268	-	75	38.725	ENSHBUG00000008326	-	99	35.200	Haplochromis_burtoni
ENSCVAG00000012268	-	64	48.469	ENSHBUG00000016284	-	89	48.469	Haplochromis_burtoni
ENSCVAG00000012268	-	99	34.516	ENSHBUG00000001242	-	67	34.516	Haplochromis_burtoni
ENSCVAG00000012268	-	62	37.173	ENSIPUG00000013342	-	61	39.267	Ictalurus_punctatus
ENSCVAG00000012268	-	71	39.070	ENSKMAG00000014605	-	69	39.070	Kryptolebias_marmoratus
ENSCVAG00000012268	-	76	34.254	ENSKMAG00000014764	-	93	34.254	Kryptolebias_marmoratus
ENSCVAG00000012268	-	71	44.037	ENSKMAG00000009600	-	88	40.078	Kryptolebias_marmoratus
ENSCVAG00000012268	-	99	42.194	ENSKMAG00000004774	-	75	42.194	Kryptolebias_marmoratus
ENSCVAG00000012268	-	65	40.909	ENSLBEG00000019652	-	67	43.434	Labrus_bergylta
ENSCVAG00000012268	-	65	47.716	ENSLOCG00000018072	-	89	43.556	Lepisosteus_oculatus
ENSCVAG00000012268	-	66	43.000	ENSLOCG00000000517	-	61	43.137	Lepisosteus_oculatus
ENSCVAG00000012268	-	64	45.128	ENSLOCG00000016496	-	55	45.128	Lepisosteus_oculatus
ENSCVAG00000012268	-	66	44.500	ENSLOCG00000000385	-	78	39.669	Lepisosteus_oculatus
ENSCVAG00000012268	-	65	49.268	ENSLOCG00000017852	-	73	49.268	Lepisosteus_oculatus
ENSCVAG00000012268	-	66	46.535	ENSLOCG00000000082	-	85	43.404	Lepisosteus_oculatus
ENSCVAG00000012268	-	65	45.238	ENSLOCG00000012075	-	92	45.714	Lepisosteus_oculatus
ENSCVAG00000012268	-	72	35.747	ENSMAMG00000021970	-	96	35.747	Mastacembelus_armatus
ENSCVAG00000012268	-	90	45.455	ENSMAMG00000015600	-	79	41.296	Mastacembelus_armatus
ENSCVAG00000012268	-	95	43.612	ENSMAMG00000021969	-	59	44.053	Mastacembelus_armatus
ENSCVAG00000012268	-	71	32.000	ENSMMOG00000016860	-	85	31.395	Mola_mola
ENSCVAG00000012268	-	61	32.143	ENSMMOG00000016864	-	71	33.673	Mola_mola
ENSCVAG00000012268	-	76	36.975	ENSMMOG00000012876	-	72	36.820	Mola_mola
ENSCVAG00000012268	-	70	39.720	ENSNBRG00000002136	-	73	39.720	Neolamprologus_brichardi
ENSCVAG00000012268	-	96	40.476	ENSORLG00000002031	-	66	40.476	Oryzias_latipes
ENSCVAG00000012268	-	96	36.014	ENSORLG00000002537	-	68	36.014	Oryzias_latipes
ENSCVAG00000012268	-	66	33.990	ENSORLG00020017387	-	85	33.990	Oryzias_latipes_hni
ENSCVAG00000012268	-	99	42.616	ENSORLG00020008286	-	86	42.616	Oryzias_latipes_hni
ENSCVAG00000012268	-	96	37.615	ENSORLG00020011284	-	80	37.615	Oryzias_latipes_hni
ENSCVAG00000012268	-	96	40.476	ENSORLG00020008323	-	66	40.476	Oryzias_latipes_hni
ENSCVAG00000012268	-	58	34.831	ENSORLG00015023234	-	89	34.831	Oryzias_latipes_hsok
ENSCVAG00000012268	-	96	40.873	ENSORLG00015004522	-	64	40.873	Oryzias_latipes_hsok
ENSCVAG00000012268	-	96	36.207	ENSORLG00015004110	-	68	36.207	Oryzias_latipes_hsok
ENSCVAG00000012268	-	97	44.344	ENSOMEG00000010594	-	92	47.115	Oryzias_melastigma
ENSCVAG00000012268	-	96	37.370	ENSOMEG00000020433	-	87	37.736	Oryzias_melastigma
ENSCVAG00000012268	-	64	49.246	ENSPKIG00000017193	-	82	49.246	Paramormyrops_kingsleyae
ENSCVAG00000012268	-	78	44.583	ENSPKIG00000017688	-	83	44.583	Paramormyrops_kingsleyae
ENSCVAG00000012268	-	61	36.316	ENSPMGG00000017993	-	74	36.316	Periophthalmus_magnuspinnatus
ENSCVAG00000012268	-	64	35.859	ENSPMGG00000014056	-	75	35.859	Periophthalmus_magnuspinnatus
ENSCVAG00000012268	-	68	40.385	ENSPMGG00000014055	-	83	40.385	Periophthalmus_magnuspinnatus
ENSCVAG00000012268	-	89	61.809	ENSPFOG00000000191	-	79	61.809	Poecilia_formosa
ENSCVAG00000012268	-	72	39.823	ENSPFOG00000005689	si:dkey-185m8.2	78	39.823	Poecilia_formosa
ENSCVAG00000012268	-	96	70.039	ENSPFOG00000022853	-	97	70.039	Poecilia_formosa
ENSCVAG00000012268	-	99	77.308	ENSPFOG00000015865	-	100	77.308	Poecilia_formosa
ENSCVAG00000012268	-	99	77.667	ENSPFOG00000013349	-	83	77.667	Poecilia_formosa
ENSCVAG00000012268	-	99	77.519	ENSPFOG00000013109	-	93	77.519	Poecilia_formosa
ENSCVAG00000012268	-	99	75.248	ENSPFOG00000012732	-	79	75.248	Poecilia_formosa
ENSCVAG00000012268	-	99	77.000	ENSPFOG00000015875	-	88	77.000	Poecilia_formosa
ENSCVAG00000012268	-	62	72.487	ENSPFOG00000022479	-	80	72.487	Poecilia_formosa
ENSCVAG00000012268	-	62	36.170	ENSPFOG00000006124	-	82	36.170	Poecilia_formosa
ENSCVAG00000012268	-	93	45.045	ENSPFOG00000016787	-	96	45.045	Poecilia_formosa
ENSCVAG00000012268	-	97	70.847	ENSPFOG00000015871	-	93	70.847	Poecilia_formosa
ENSCVAG00000012268	-	66	43.564	ENSPLAG00000018606	-	76	43.564	Poecilia_latipinna
ENSCVAG00000012268	-	59	33.149	ENSPLAG00000018911	-	66	33.149	Poecilia_latipinna
ENSCVAG00000012268	-	63	55.274	ENSPLAG00000018692	-	85	56.780	Poecilia_latipinna
ENSCVAG00000012268	-	99	84.264	ENSPLAG00000020776	-	91	84.264	Poecilia_latipinna
ENSCVAG00000012268	-	62	50.794	ENSPLAG00000018664	-	69	50.794	Poecilia_latipinna
ENSCVAG00000012268	-	92	73.427	ENSPLAG00000003020	-	90	73.427	Poecilia_latipinna
ENSCVAG00000012268	-	99	79.012	ENSPMEG00000005912	-	76	79.012	Poecilia_mexicana
ENSCVAG00000012268	-	55	76.786	ENSPMEG00000020252	-	74	76.786	Poecilia_mexicana
ENSCVAG00000012268	-	62	63.679	ENSPMEG00000000724	-	57	63.679	Poecilia_mexicana
ENSCVAG00000012268	-	99	80.952	ENSPMEG00000020297	-	100	80.952	Poecilia_mexicana
ENSCVAG00000012268	-	59	33.149	ENSPMEG00000018950	-	66	33.149	Poecilia_mexicana
ENSCVAG00000012268	-	62	61.579	ENSPMEG00000006334	-	66	61.579	Poecilia_mexicana
ENSCVAG00000012268	-	96	44.397	ENSPMEG00000000604	-	76	44.397	Poecilia_mexicana
ENSCVAG00000012268	-	61	57.672	ENSPMEG00000010605	-	75	57.672	Poecilia_mexicana
ENSCVAG00000012268	-	99	42.126	ENSPREG00000020440	-	78	42.126	Poecilia_reticulata
ENSCVAG00000012268	-	80	77.778	ENSPREG00000001250	-	96	77.778	Poecilia_reticulata
ENSCVAG00000012268	-	98	78.652	ENSPREG00000001530	-	78	78.652	Poecilia_reticulata
ENSCVAG00000012268	-	85	35.985	ENSPNYG00000010004	-	89	35.985	Pundamilia_nyererei
ENSCVAG00000012268	-	95	41.290	ENSPNAG00000014932	-	67	41.290	Pygocentrus_nattereri
ENSCVAG00000012268	-	76	38.462	ENSPNAG00000019899	-	93	38.462	Pygocentrus_nattereri
ENSCVAG00000012268	-	76	42.918	ENSPNAG00000002097	-	91	42.918	Pygocentrus_nattereri
ENSCVAG00000012268	-	61	37.037	ENSPNAG00000025850	-	68	36.923	Pygocentrus_nattereri
ENSCVAG00000012268	-	97	39.224	ENSPNAG00000013132	-	72	39.224	Pygocentrus_nattereri
ENSCVAG00000012268	-	65	41.919	ENSSFOG00015002420	-	74	41.919	Scleropages_formosus
ENSCVAG00000012268	-	62	38.624	ENSSFOG00015002507	-	72	38.624	Scleropages_formosus
ENSCVAG00000012268	-	77	35.656	ENSSFOG00015002503	-	89	35.656	Scleropages_formosus
ENSCVAG00000012268	-	95	36.299	ENSSMAG00000012187	-	70	36.299	Scophthalmus_maximus
ENSCVAG00000012268	-	72	43.182	ENSSDUG00000022299	-	83	43.182	Seriola_dumerili
ENSCVAG00000012268	-	92	45.146	ENSSLDG00000010531	-	92	42.735	Seriola_lalandi_dorsalis
ENSCVAG00000012268	-	89	50.526	ENSSLDG00000009168	-	99	44.715	Seriola_lalandi_dorsalis
ENSCVAG00000012268	-	97	38.790	ENSSLDG00000005786	-	67	38.790	Seriola_lalandi_dorsalis
ENSCVAG00000012268	-	78	40.336	ENSSPAG00000017616	-	80	40.336	Stegastes_partitus
ENSCVAG00000012268	-	65	41.919	ENSSPAG00000015927	-	81	44.118	Stegastes_partitus
ENSCVAG00000012268	-	71	36.744	ENSTRUG00000020422	-	73	36.744	Takifugu_rubripes
ENSCVAG00000012268	-	73	38.843	ENSTRUG00000018070	-	66	41.000	Takifugu_rubripes
ENSCVAG00000012268	-	71	44.240	ENSTNIG00000004275	-	90	44.240	Tetraodon_nigroviridis
ENSCVAG00000012268	-	72	45.852	ENSTNIG00000004220	-	93	45.852	Tetraodon_nigroviridis
ENSCVAG00000012268	-	62	43.367	ENSXCOG00000009005	-	89	39.834	Xiphophorus_couchianus
ENSCVAG00000012268	-	76	79.654	ENSXCOG00000018421	-	100	79.654	Xiphophorus_couchianus
ENSCVAG00000012268	-	99	75.084	ENSXMAG00000023360	-	83	75.084	Xiphophorus_maculatus