EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000012274 (Gene tree)
Gene ID: 107095478
Gene Symbol: trmt1l
Alias: im:7142104|si:dkeyp-11g8.5
Full Name: tRNA methyltransferase 1 like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 14438 bases
Position: chrKL653050.1:395216-409653
Accession: 107095478
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000026532	TRM	PF02005.16	1.3e-67	1	2
ENSCVAP00000026532	TRM	PF02005.16	1.3e-67	2	2
ENSCVAP00000010118	TRM	PF02005.16	1.4e-67	1	2
ENSCVAP00000010118	TRM	PF02005.16	1.4e-67	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000029431	-	2600	XM_015391594	ENSCVAP00000010118	678 (aa)	XP_015247080	UPI00074287E2
ENSCVAT00000016679	-	1896	-	ENSCVAP00000026532	631 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000012274's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000012274's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000012274	trmt1l	96	59.939	ENSG00000121486	TRMT1L	99	71.564	Homo_sapiens
ENSCVAG00000012274	trmt1l	99	83.481	ENSAPOG00000011807	trmt1l	98	84.211	Acanthochromis_polyacanthus
ENSCVAG00000012274	trmt1l	96	59.174	ENSAMEG00000013538	TRMT1L	89	59.174	Ailuropoda_melanoleuca
ENSCVAG00000012274	trmt1l	74	88.627	ENSACIG00000012049	trmt1l	92	89.625	Amphilophus_citrinellus
ENSCVAG00000012274	trmt1l	99	82.743	ENSAOCG00000018112	trmt1l	98	83.609	Amphiprion_ocellaris
ENSCVAG00000012274	trmt1l	99	82.596	ENSAPEG00000021433	trmt1l	97	85.902	Amphiprion_percula
ENSCVAG00000012274	trmt1l	98	85.202	ENSATEG00000004573	trmt1l	98	88.721	Anabas_testudineus
ENSCVAG00000012274	trmt1l	91	61.489	ENSAPLG00000008394	TRMT1L	94	59.084	Anas_platyrhynchos
ENSCVAG00000012274	trmt1l	92	61.228	ENSACAG00000002342	TRMT1L	85	61.501	Anolis_carolinensis
ENSCVAG00000012274	trmt1l	96	59.939	ENSANAG00000038162	TRMT1L	89	59.939	Aotus_nancymaae
ENSCVAG00000012274	trmt1l	100	82.743	ENSACLG00000021625	trmt1l	98	83.535	Astatotilapia_calliptera
ENSCVAG00000012274	trmt1l	99	75.216	ENSAMXG00000009602	trmt1l	97	76.479	Astyanax_mexicanus
ENSCVAG00000012274	trmt1l	97	59.480	ENSBTAG00000011285	TRMT1L	88	59.389	Bos_taurus
ENSCVAG00000012274	trmt1l	97	59.695	ENSCJAG00000005456	TRMT1L	89	60.850	Callithrix_jacchus
ENSCVAG00000012274	trmt1l	97	58.699	ENSCAFG00000013518	TRMT1L	87	59.909	Canis_familiaris
ENSCVAG00000012274	trmt1l	97	58.994	ENSCAFG00020015640	TRMT1L	89	59.174	Canis_lupus_dingo
ENSCVAG00000012274	trmt1l	97	58.994	ENSCHIG00000016522	TRMT1L	87	60.337	Capra_hircus
ENSCVAG00000012274	trmt1l	96	59.237	ENSTSYG00000010465	TRMT1L	90	59.237	Carlito_syrichta
ENSCVAG00000012274	trmt1l	70	60.465	ENSCAPG00000012562	TRMT1L	77	63.374	Cavia_aperea
ENSCVAG00000012274	trmt1l	97	59.237	ENSCPOG00000001567	TRMT1L	89	60.611	Cavia_porcellus
ENSCVAG00000012274	trmt1l	97	59.299	ENSCCAG00000018699	TRMT1L	89	59.299	Cebus_capucinus
ENSCVAG00000012274	trmt1l	96	60.337	ENSCATG00000043114	TRMT1L	89	60.092	Cercocebus_atys
ENSCVAG00000012274	trmt1l	96	60.031	ENSCLAG00000010801	-	90	60.031	Chinchilla_lanigera
ENSCVAG00000012274	trmt1l	97	46.483	ENSCLAG00000010853	-	88	46.412	Chinchilla_lanigera
ENSCVAG00000012274	trmt1l	96	60.337	ENSCSAG00000012880	TRMT1L	89	60.092	Chlorocebus_sabaeus
ENSCVAG00000012274	trmt1l	54	69.262	ENSCHOG00000011164	TRMT1L	56	69.262	Choloepus_hoffmanni
ENSCVAG00000012274	trmt1l	95	61.778	ENSCPBG00000015694	TRMT1L	91	61.876	Chrysemys_picta_bellii
ENSCVAG00000012274	trmt1l	96	60.490	ENSCANG00000031107	TRMT1L	89	60.245	Colobus_angolensis_palliatus
ENSCVAG00000012274	trmt1l	97	57.663	ENSCGRG00001019297	Trmt1l	89	58.559	Cricetulus_griseus_chok1gshd
ENSCVAG00000012274	trmt1l	97	57.663	ENSCGRG00000005036	Trmt1l	89	58.559	Cricetulus_griseus_crigri
ENSCVAG00000012274	trmt1l	99	79.674	ENSCSEG00000001248	trmt1l	98	79.760	Cynoglossus_semilaevis
ENSCVAG00000012274	trmt1l	99	74.273	ENSDARG00000042057	trmt1l	97	75.148	Danio_rerio
ENSCVAG00000012274	trmt1l	97	59.146	ENSDNOG00000005239	TRMT1L	89	59.327	Dasypus_novemcinctus
ENSCVAG00000012274	trmt1l	80	62.571	ENSDORG00000003298	Trmt1l	79	63.688	Dipodomys_ordii
ENSCVAG00000012274	trmt1l	76	68.443	ENSETEG00000015895	TRMT1L	68	70.000	Echinops_telfairi
ENSCVAG00000012274	trmt1l	91	48.805	ENSEBUG00000010301	trmt1l	93	48.805	Eptatretus_burgeri
ENSCVAG00000012274	trmt1l	97	58.333	ENSEASG00005005551	TRMT1L	88	58.425	Equus_asinus_asinus
ENSCVAG00000012274	trmt1l	98	58.761	ENSECAG00000020999	TRMT1L	83	60.061	Equus_caballus
ENSCVAG00000012274	trmt1l	83	70.330	ENSEEUG00000014110	TRMT1L	78	70.330	Erinaceus_europaeus
ENSCVAG00000012274	trmt1l	99	75.429	ENSELUG00000020587	trmt1l	98	76.867	Esox_lucius
ENSCVAG00000012274	trmt1l	97	59.084	ENSFCAG00000011285	TRMT1L	89	59.668	Felis_catus
ENSCVAG00000012274	trmt1l	91	61.851	ENSFALG00000003177	TRMT1L	94	62.141	Ficedula_albicollis
ENSCVAG00000012274	trmt1l	95	60.093	ENSFDAG00000008822	TRMT1L	88	61.043	Fukomys_damarensis
ENSCVAG00000012274	trmt1l	78	90.926	ENSFHEG00000014328	trmt1l	98	91.619	Fundulus_heteroclitus
ENSCVAG00000012274	trmt1l	94	76.873	ENSGMOG00000009535	trmt1l	99	77.070	Gadus_morhua
ENSCVAG00000012274	trmt1l	91	61.102	ENSGALG00000033077	TRMT1L	83	60.870	Gallus_gallus
ENSCVAG00000012274	trmt1l	100	84.853	ENSGAFG00000012445	trmt1l	98	86.036	Gambusia_affinis
ENSCVAG00000012274	trmt1l	94	81.377	ENSGACG00000005050	trmt1l	97	85.533	Gasterosteus_aculeatus
ENSCVAG00000012274	trmt1l	91	63.489	ENSGAGG00000007441	TRMT1L	82	63.880	Gopherus_agassizii
ENSCVAG00000012274	trmt1l	97	59.451	ENSGGOG00000011778	TRMT1L	89	59.451	Gorilla_gorilla
ENSCVAG00000012274	trmt1l	100	82.891	ENSHBUG00000000622	trmt1l	98	83.686	Haplochromis_burtoni
ENSCVAG00000012274	trmt1l	96	58.019	ENSHGLG00000003135	-	90	58.085	Heterocephalus_glaber_female
ENSCVAG00000012274	trmt1l	96	50.000	ENSHGLG00000012595	-	92	50.696	Heterocephalus_glaber_female
ENSCVAG00000012274	trmt1l	97	59.847	ENSHGLG00100019412	-	90	60.184	Heterocephalus_glaber_male
ENSCVAG00000012274	trmt1l	96	50.000	ENSHGLG00100004569	-	92	50.696	Heterocephalus_glaber_male
ENSCVAG00000012274	trmt1l	97	72.097	ENSIPUG00000008873	trmt1l	99	72.071	Ictalurus_punctatus
ENSCVAG00000012274	trmt1l	97	59.389	ENSSTOG00000010332	TRMT1L	90	59.389	Ictidomys_tridecemlineatus
ENSCVAG00000012274	trmt1l	97	58.257	ENSJJAG00000010929	Trmt1l	95	57.687	Jaculus_jaculus
ENSCVAG00000012274	trmt1l	96	84.236	ENSKMAG00000010310	trmt1l	93	85.057	Kryptolebias_marmoratus
ENSCVAG00000012274	trmt1l	91	84.304	ENSLBEG00000007982	-	100	84.304	Labrus_bergylta
ENSCVAG00000012274	trmt1l	99	83.482	ENSLBEG00000003487	trmt1l	99	83.683	Labrus_bergylta
ENSCVAG00000012274	trmt1l	94	63.801	ENSLACG00000008447	TRMT1L	93	64.352	Latimeria_chalumnae
ENSCVAG00000012274	trmt1l	98	72.807	ENSLOCG00000001781	trmt1l	97	73.156	Lepisosteus_oculatus
ENSCVAG00000012274	trmt1l	97	59.604	ENSLAFG00000004339	TRMT1L	89	60.363	Loxodonta_africana
ENSCVAG00000012274	trmt1l	96	60.337	ENSMFAG00000037592	TRMT1L	89	60.092	Macaca_fascicularis
ENSCVAG00000012274	trmt1l	96	60.337	ENSMMUG00000013879	TRMT1L	94	60.092	Macaca_mulatta
ENSCVAG00000012274	trmt1l	96	60.337	ENSMNEG00000041637	TRMT1L	89	60.092	Macaca_nemestrina
ENSCVAG00000012274	trmt1l	96	60.337	ENSMLEG00000004840	TRMT1L	89	60.092	Mandrillus_leucophaeus
ENSCVAG00000012274	trmt1l	97	79.818	ENSMAMG00000015305	trmt1l	98	84.422	Mastacembelus_armatus
ENSCVAG00000012274	trmt1l	100	82.891	ENSMZEG00005017822	trmt1l	98	83.686	Maylandia_zebra
ENSCVAG00000012274	trmt1l	91	61.066	ENSMGAG00000000930	TRMT1L	94	62.201	Meleagris_gallopavo
ENSCVAG00000012274	trmt1l	97	55.807	ENSMAUG00000019870	Trmt1l	91	55.807	Mesocricetus_auratus
ENSCVAG00000012274	trmt1l	97	59.542	ENSMICG00000009494	TRMT1L	88	60.514	Microcebus_murinus
ENSCVAG00000012274	trmt1l	96	58.000	ENSMOCG00000016453	Trmt1l	89	58.371	Microtus_ochrogaster
ENSCVAG00000012274	trmt1l	97	80.395	ENSMMOG00000016961	trmt1l	100	79.787	Mola_mola
ENSCVAG00000012274	trmt1l	97	60.518	ENSMODG00000007454	TRMT1L	72	63.449	Monodelphis_domestica
ENSCVAG00000012274	trmt1l	99	81.965	ENSMALG00000019306	trmt1l	98	82.635	Monopterus_albus
ENSCVAG00000012274	trmt1l	96	58.104	MGP_CAROLIEiJ_G0014693	Trmt1l	89	58.610	Mus_caroli
ENSCVAG00000012274	trmt1l	96	57.774	ENSMUSG00000053286	Trmt1l	89	58.283	Mus_musculus
ENSCVAG00000012274	trmt1l	96	58.079	MGP_PahariEiJ_G0027929	Trmt1l	89	58.410	Mus_pahari
ENSCVAG00000012274	trmt1l	84	61.215	MGP_SPRETEiJ_G0015500	Trmt1l	87	67.778	Mus_spretus
ENSCVAG00000012274	trmt1l	96	55.115	ENSMPUG00000011859	TRMT1L	89	56.672	Mustela_putorius_furo
ENSCVAG00000012274	trmt1l	97	59.756	ENSMLUG00000001136	TRMT1L	90	61.035	Myotis_lucifugus
ENSCVAG00000012274	trmt1l	96	58.257	ENSNGAG00000011685	Trmt1l	90	58.548	Nannospalax_galili
ENSCVAG00000012274	trmt1l	74	86.420	ENSNBRG00000004053	trmt1l	99	86.076	Neolamprologus_brichardi
ENSCVAG00000012274	trmt1l	96	60.092	ENSNLEG00000018030	TRMT1L	89	60.092	Nomascus_leucogenys
ENSCVAG00000012274	trmt1l	78	65.138	ENSMEUG00000011344	TRMT1L	79	65.138	Notamacropus_eugenii
ENSCVAG00000012274	trmt1l	81	62.222	ENSOPRG00000000680	TRMT1L	83	62.222	Ochotona_princeps
ENSCVAG00000012274	trmt1l	96	56.549	ENSODEG00000000826	TRMT1L	91	56.612	Octodon_degus
ENSCVAG00000012274	trmt1l	100	83.186	ENSONIG00000007823	trmt1l	100	84.455	Oreochromis_niloticus
ENSCVAG00000012274	trmt1l	92	61.935	ENSOANG00000001010	TRMT1L	95	62.222	Ornithorhynchus_anatinus
ENSCVAG00000012274	trmt1l	92	60.548	ENSOCUG00000004896	TRMT1L	87	60.625	Oryctolagus_cuniculus
ENSCVAG00000012274	trmt1l	97	83.969	ENSORLG00000029610	trmt1l	97	87.374	Oryzias_latipes
ENSCVAG00000012274	trmt1l	97	84.122	ENSORLG00020002203	trmt1l	97	83.964	Oryzias_latipes_hni
ENSCVAG00000012274	trmt1l	97	84.427	ENSORLG00015021512	trmt1l	97	84.266	Oryzias_latipes_hsok
ENSCVAG00000012274	trmt1l	85	93.478	ENSOMEG00000016275	trmt1l	86	93.478	Oryzias_melastigma
ENSCVAG00000012274	trmt1l	95	55.079	ENSOGAG00000016186	TRMT1L	95	56.933	Otolemur_garnettii
ENSCVAG00000012274	trmt1l	97	58.994	ENSOARG00000003786	TRMT1L	89	58.994	Ovis_aries
ENSCVAG00000012274	trmt1l	96	59.633	ENSPPAG00000029141	TRMT1L	89	59.633	Pan_paniscus
ENSCVAG00000012274	trmt1l	97	58.931	ENSPPRG00000023981	TRMT1L	89	59.668	Panthera_pardus
ENSCVAG00000012274	trmt1l	97	58.931	ENSPTIG00000021754	TRMT1L	89	59.668	Panthera_tigris_altaica
ENSCVAG00000012274	trmt1l	96	59.633	ENSPTRG00000001776	TRMT1L	89	59.633	Pan_troglodytes
ENSCVAG00000012274	trmt1l	96	58.959	ENSPANG00000020890	TRMT1L	89	58.716	Papio_anubis
ENSCVAG00000012274	trmt1l	98	75.145	ENSPKIG00000005941	trmt1l	98	75.328	Paramormyrops_kingsleyae
ENSCVAG00000012274	trmt1l	95	61.346	ENSPSIG00000010011	TRMT1L	91	63.419	Pelodiscus_sinensis
ENSCVAG00000012274	trmt1l	81	73.764	ENSPMGG00000021359	trmt1l	95	73.656	Periophthalmus_magnuspinnatus
ENSCVAG00000012274	trmt1l	97	58.055	ENSPEMG00000000031	Trmt1l	90	58.647	Peromyscus_maniculatus_bairdii
ENSCVAG00000012274	trmt1l	91	55.943	ENSPMAG00000005838	trmt1l	99	56.426	Petromyzon_marinus
ENSCVAG00000012274	trmt1l	95	64.032	ENSPCIG00000002409	TRMT1L	82	65.058	Phascolarctos_cinereus
ENSCVAG00000012274	trmt1l	100	85.316	ENSPFOG00000003872	trmt1l	98	86.507	Poecilia_formosa
ENSCVAG00000012274	trmt1l	100	85.316	ENSPLAG00000010387	trmt1l	98	86.507	Poecilia_latipinna
ENSCVAG00000012274	trmt1l	100	85.463	ENSPMEG00000011828	trmt1l	98	88.442	Poecilia_mexicana
ENSCVAG00000012274	trmt1l	100	85.000	ENSPREG00000002866	trmt1l	98	86.357	Poecilia_reticulata
ENSCVAG00000012274	trmt1l	96	59.786	ENSPPYG00000000416	TRMT1L	89	59.786	Pongo_abelii
ENSCVAG00000012274	trmt1l	88	62.335	ENSPCAG00000008257	TRMT1L	77	69.663	Procavia_capensis
ENSCVAG00000012274	trmt1l	96	37.876	ENSPCOG00000005682	TRMT1L	80	57.303	Propithecus_coquereli
ENSCVAG00000012274	trmt1l	84	62.004	ENSPVAG00000005961	TRMT1L	76	66.143	Pteropus_vampyrus
ENSCVAG00000012274	trmt1l	99	78.539	ENSPNYG00000005607	trmt1l	98	82.975	Pundamilia_nyererei
ENSCVAG00000012274	trmt1l	99	75.328	ENSPNAG00000004389	trmt1l	97	76.148	Pygocentrus_nattereri
ENSCVAG00000012274	trmt1l	96	58.589	ENSRNOG00000002580	Trmt1l	89	58.788	Rattus_norvegicus
ENSCVAG00000012274	trmt1l	96	60.337	ENSRBIG00000042589	TRMT1L	89	60.092	Rhinopithecus_bieti
ENSCVAG00000012274	trmt1l	96	60.337	ENSRROG00000032183	TRMT1L	89	60.092	Rhinopithecus_roxellana
ENSCVAG00000012274	trmt1l	97	60.061	ENSSBOG00000029282	TRMT1L	88	61.120	Saimiri_boliviensis_boliviensis
ENSCVAG00000012274	trmt1l	99	75.617	ENSSFOG00015004878	trmt1l	97	76.593	Scleropages_formosus
ENSCVAG00000012274	trmt1l	68	81.957	ENSSMAG00000015425	trmt1l	98	76.676	Scophthalmus_maximus
ENSCVAG00000012274	trmt1l	100	85.988	ENSSDUG00000021807	trmt1l	98	89.527	Seriola_dumerili
ENSCVAG00000012274	trmt1l	90	87.889	ENSSLDG00000016579	trmt1l	98	89.358	Seriola_lalandi_dorsalis
ENSCVAG00000012274	trmt1l	66	64.423	ENSSARG00000010135	TRMT1L	82	64.423	Sorex_araneus
ENSCVAG00000012274	trmt1l	89	65.247	ENSSPUG00000003927	TRMT1L	96	65.385	Sphenodon_punctatus
ENSCVAG00000012274	trmt1l	98	84.384	ENSSPAG00000008597	trmt1l	98	84.685	Stegastes_partitus
ENSCVAG00000012274	trmt1l	97	60.530	ENSSSCG00000021393	TRMT1L	84	60.530	Sus_scrofa
ENSCVAG00000012274	trmt1l	91	62.075	ENSTGUG00000003737	TRMT1L	92	62.360	Taeniopygia_guttata
ENSCVAG00000012274	trmt1l	93	75.244	ENSTRUG00000002396	trmt1l	98	72.743	Takifugu_rubripes
ENSCVAG00000012274	trmt1l	62	81.190	ENSTNIG00000005534	trmt1l	99	81.190	Tetraodon_nigroviridis
ENSCVAG00000012274	trmt1l	78	61.677	ENSTBEG00000016498	TRMT1L	74	61.677	Tupaia_belangeri
ENSCVAG00000012274	trmt1l	97	57.012	ENSTTRG00000005892	TRMT1L	87	58.193	Tursiops_truncatus
ENSCVAG00000012274	trmt1l	96	59.174	ENSUAMG00000020936	TRMT1L	89	59.174	Ursus_americanus
ENSCVAG00000012274	trmt1l	97	58.841	ENSUMAG00000021919	TRMT1L	88	59.021	Ursus_maritimus
ENSCVAG00000012274	trmt1l	96	59.571	ENSVPAG00000011854	TRMT1L	94	61.783	Vicugna_pacos
ENSCVAG00000012274	trmt1l	97	58.994	ENSVVUG00000009166	TRMT1L	89	59.174	Vulpes_vulpes
ENSCVAG00000012274	trmt1l	79	56.800	ENSXETG00000004539	trmt1l	96	56.800	Xenopus_tropicalis
ENSCVAG00000012274	trmt1l	89	85.893	ENSXCOG00000007372	trmt1l	91	85.893	Xiphophorus_couchianus
ENSCVAG00000012274	trmt1l	100	84.875	ENSXMAG00000003575	trmt1l	98	86.403	Xiphophorus_maculatus