EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000012310 (Gene tree)
Gene ID: 107084235
Gene Symbol: si:ch211-93g23.2
Alias: -
Full Name: putative methyltransferase DDB_G0268948
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 14303 bases
Position: chrKL652595.1:997229-1011531
Accession: 107084235
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000010204	Methyltransf_31	PF13847.6	7e-12	1	1
ENSCVAP00000010213	Methyltransf_31	PF13847.6	1.8e-11	1	1
ENSCVAP00000026610	Methyltransf_31	PF13847.6	1.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000016827	-	1200	-	ENSCVAP00000010204	166 (aa)	-	-
ENSCVAT00000029467	-	1141	XM_015373969	ENSCVAP00000026610	273 (aa)	XP_015229455	UPI0007424EED
ENSCVAT00000029471	-	1144	-	ENSCVAP00000010213	273 (aa)	-	UPI0007424EED

Gene Model

Click here to download ENSCVAG00000012310's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000012310's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000012310	si:ch211-93g23.2	98	50.303	ENSCVAG00000021429	zgc:162396	99	42.647
ENSCVAG00000012310	si:ch211-93g23.2	99	54.412	ENSCVAG00000021445	zgc:162780	99	54.412

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000012310	si:ch211-93g23.2	99	70.480	ENSAPOG00000008054	si:ch211-93g23.2	100	70.480	Acanthochromis_polyacanthus
ENSCVAG00000012310	si:ch211-93g23.2	97	57.669	ENSAPOG00000015391	zgc:162780	99	55.147	Acanthochromis_polyacanthus
ENSCVAG00000012310	si:ch211-93g23.2	100	72.289	ENSACIG00000024058	si:ch211-93g23.2	89	72.289	Amphilophus_citrinellus
ENSCVAG00000012310	si:ch211-93g23.2	97	57.669	ENSACIG00000015409	zgc:162780	97	54.779	Amphilophus_citrinellus
ENSCVAG00000012310	si:ch211-93g23.2	99	71.587	ENSAOCG00000000447	-	100	71.587	Amphiprion_ocellaris
ENSCVAG00000012310	si:ch211-93g23.2	97	59.509	ENSAOCG00000004147	zgc:162780	99	55.882	Amphiprion_ocellaris
ENSCVAG00000012310	si:ch211-93g23.2	97	57.669	ENSAPEG00000008212	zgc:162780	99	54.779	Amphiprion_percula
ENSCVAG00000012310	si:ch211-93g23.2	98	70.370	ENSAPEG00000012843	si:ch211-93g23.2	99	70.370	Amphiprion_percula
ENSCVAG00000012310	si:ch211-93g23.2	97	55.828	ENSATEG00000011843	zgc:162780	99	53.676	Anabas_testudineus
ENSCVAG00000012310	si:ch211-93g23.2	97	75.155	ENSACLG00000009543	si:ch211-93g23.2	100	72.222	Astatotilapia_calliptera
ENSCVAG00000012310	si:ch211-93g23.2	97	57.669	ENSACLG00000006922	zgc:162780	99	54.779	Astatotilapia_calliptera
ENSCVAG00000012310	si:ch211-93g23.2	97	58.282	ENSAMXG00000040257	zgc:162780	100	54.182	Astyanax_mexicanus
ENSCVAG00000012310	si:ch211-93g23.2	99	57.565	ENSDARG00000070558	si:ch211-93g23.2	99	57.565	Danio_rerio
ENSCVAG00000012310	si:ch211-93g23.2	97	59.877	ENSDARG00000069548	zgc:162780	100	55.474	Danio_rerio
ENSCVAG00000012310	si:ch211-93g23.2	97	61.963	ENSELUG00000005357	zgc:162780	99	58.672	Esox_lucius
ENSCVAG00000012310	si:ch211-93g23.2	74	61.290	ENSELUG00000002477	si:ch211-93g23.2	79	61.290	Esox_lucius
ENSCVAG00000012310	si:ch211-93g23.2	99	53.309	ENSFHEG00000005204	zgc:162780	99	53.309	Fundulus_heteroclitus
ENSCVAG00000012310	si:ch211-93g23.2	85	58.369	ENSGMOG00000005502	zgc:162780	100	58.369	Gadus_morhua
ENSCVAG00000012310	si:ch211-93g23.2	100	77.289	ENSGAFG00000007683	si:ch211-93g23.2	100	77.289	Gambusia_affinis
ENSCVAG00000012310	si:ch211-93g23.2	99	52.941	ENSGAFG00000018382	zgc:162780	99	52.941	Gambusia_affinis
ENSCVAG00000012310	si:ch211-93g23.2	97	73.620	ENSGACG00000014722	si:ch211-93g23.2	99	69.853	Gasterosteus_aculeatus
ENSCVAG00000012310	si:ch211-93g23.2	98	73.171	ENSHBUG00000004418	si:ch211-93g23.2	100	71.852	Haplochromis_burtoni
ENSCVAG00000012310	si:ch211-93g23.2	97	57.669	ENSHBUG00000000524	zgc:162780	99	54.779	Haplochromis_burtoni
ENSCVAG00000012310	si:ch211-93g23.2	99	61.585	ENSHCOG00000009980	si:ch211-93g23.2	100	57.037	Hippocampus_comes
ENSCVAG00000012310	si:ch211-93g23.2	97	57.055	ENSKMAG00000018418	zgc:162780	97	54.044	Kryptolebias_marmoratus
ENSCVAG00000012310	si:ch211-93g23.2	97	73.913	ENSLBEG00000006987	-	100	70.000	Labrus_bergylta
ENSCVAG00000012310	si:ch211-93g23.2	97	59.509	ENSLBEG00000026521	zgc:162780	99	56.250	Labrus_bergylta
ENSCVAG00000012310	si:ch211-93g23.2	97	73.292	ENSLBEG00000013961	si:ch211-93g23.2	100	69.630	Labrus_bergylta
ENSCVAG00000012310	si:ch211-93g23.2	97	58.282	ENSMAMG00000013237	zgc:162780	99	54.779	Mastacembelus_armatus
ENSCVAG00000012310	si:ch211-93g23.2	97	57.669	ENSMZEG00005000825	zgc:162780	99	55.147	Maylandia_zebra
ENSCVAG00000012310	si:ch211-93g23.2	97	75.155	ENSMZEG00005014627	si:ch211-93g23.2	100	72.222	Maylandia_zebra
ENSCVAG00000012310	si:ch211-93g23.2	98	66.049	ENSMMOG00000019634	si:ch211-93g23.2	95	66.049	Mola_mola
ENSCVAG00000012310	si:ch211-93g23.2	97	57.669	ENSMALG00000012598	zgc:162780	99	54.412	Monopterus_albus
ENSCVAG00000012310	si:ch211-93g23.2	97	74.534	ENSNBRG00000019105	si:ch211-93g23.2	100	72.222	Neolamprologus_brichardi
ENSCVAG00000012310	si:ch211-93g23.2	97	56.442	ENSNBRG00000014908	zgc:162780	99	54.044	Neolamprologus_brichardi
ENSCVAG00000012310	si:ch211-93g23.2	97	75.776	ENSONIG00000013383	si:ch211-93g23.2	100	72.963	Oreochromis_niloticus
ENSCVAG00000012310	si:ch211-93g23.2	97	57.055	ENSONIG00000004462	zgc:162780	99	54.044	Oreochromis_niloticus
ENSCVAG00000012310	si:ch211-93g23.2	99	70.741	ENSORLG00000002372	si:ch211-93g23.2	100	70.741	Oryzias_latipes
ENSCVAG00000012310	si:ch211-93g23.2	99	70.741	ENSORLG00020022021	si:ch211-93g23.2	100	70.741	Oryzias_latipes_hni
ENSCVAG00000012310	si:ch211-93g23.2	97	59.509	ENSORLG00015008510	zgc:162780	99	56.618	Oryzias_latipes_hsok
ENSCVAG00000012310	si:ch211-93g23.2	97	72.671	ENSORLG00015021473	si:ch211-93g23.2	100	70.370	Oryzias_latipes_hsok
ENSCVAG00000012310	si:ch211-93g23.2	99	72.593	ENSOMEG00000013365	si:ch211-93g23.2	100	72.593	Oryzias_melastigma
ENSCVAG00000012310	si:ch211-93g23.2	97	57.669	ENSOMEG00000010679	zgc:162780	99	54.044	Oryzias_melastigma
ENSCVAG00000012310	si:ch211-93g23.2	97	60.494	ENSPKIG00000011610	si:ch211-93g23.2	99	56.827	Paramormyrops_kingsleyae
ENSCVAG00000012310	si:ch211-93g23.2	98	66.258	ENSPMGG00000011829	si:ch211-93g23.2	98	64.458	Periophthalmus_magnuspinnatus
ENSCVAG00000012310	si:ch211-93g23.2	99	53.676	ENSPFOG00000002781	zgc:162780	99	53.676	Poecilia_formosa
ENSCVAG00000012310	si:ch211-93g23.2	100	80.220	ENSPFOG00000013857	si:ch211-93g23.2	100	80.220	Poecilia_formosa
ENSCVAG00000012310	si:ch211-93g23.2	100	77.108	ENSPLAG00000015878	-	100	77.108	Poecilia_latipinna
ENSCVAG00000012310	si:ch211-93g23.2	99	53.676	ENSPLAG00000010255	zgc:162780	99	53.676	Poecilia_latipinna
ENSCVAG00000012310	si:ch211-93g23.2	99	53.676	ENSPMEG00000000022	zgc:162780	99	53.676	Poecilia_mexicana
ENSCVAG00000012310	si:ch211-93g23.2	98	79.775	ENSPMEG00000008837	-	100	77.108	Poecilia_mexicana
ENSCVAG00000012310	si:ch211-93g23.2	100	79.121	ENSPREG00000016831	si:ch211-93g23.2	100	79.121	Poecilia_reticulata
ENSCVAG00000012310	si:ch211-93g23.2	97	55.215	ENSPREG00000016480	zgc:162780	96	52.399	Poecilia_reticulata
ENSCVAG00000012310	si:ch211-93g23.2	97	56.442	ENSPNYG00000009882	zgc:162780	99	54.412	Pundamilia_nyererei
ENSCVAG00000012310	si:ch211-93g23.2	98	73.780	ENSPNYG00000009369	si:ch211-93g23.2	100	71.852	Pundamilia_nyererei
ENSCVAG00000012310	si:ch211-93g23.2	100	53.650	ENSPNAG00000026108	zgc:162780	100	53.650	Pygocentrus_nattereri
ENSCVAG00000012310	si:ch211-93g23.2	97	53.704	ENSSFOG00015018587	si:ch211-93g23.2	99	50.368	Scleropages_formosus
ENSCVAG00000012310	si:ch211-93g23.2	97	59.509	ENSSMAG00000004498	zgc:162780	99	57.353	Scophthalmus_maximus
ENSCVAG00000012310	si:ch211-93g23.2	97	56.442	ENSSDUG00000010324	zgc:162780	99	54.412	Seriola_dumerili
ENSCVAG00000012310	si:ch211-93g23.2	98	75.309	ENSSDUG00000022311	si:ch211-93g23.2	99	75.309	Seriola_dumerili
ENSCVAG00000012310	si:ch211-93g23.2	97	57.055	ENSSLDG00000021444	zgc:162780	99	54.779	Seriola_lalandi_dorsalis
ENSCVAG00000012310	si:ch211-93g23.2	99	73.704	ENSSLDG00000005926	si:ch211-93g23.2	100	73.704	Seriola_lalandi_dorsalis
ENSCVAG00000012310	si:ch211-93g23.2	98	73.620	ENSSPAG00000014251	si:ch211-93g23.2	96	70.588	Stegastes_partitus
ENSCVAG00000012310	si:ch211-93g23.2	97	70.807	ENSTRUG00000014609	si:ch211-93g23.2	100	67.033	Takifugu_rubripes
ENSCVAG00000012310	si:ch211-93g23.2	98	69.136	ENSTNIG00000000686	-	99	65.185	Tetraodon_nigroviridis
ENSCVAG00000012310	si:ch211-93g23.2	99	53.676	ENSXCOG00000014527	zgc:162780	99	53.676	Xiphophorus_couchianus
ENSCVAG00000012310	si:ch211-93g23.2	100	77.711	ENSXCOG00000020437	si:ch211-93g23.2	100	77.711	Xiphophorus_couchianus
ENSCVAG00000012310	si:ch211-93g23.2	100	81.319	ENSXMAG00000007855	si:ch211-93g23.2	100	81.319	Xiphophorus_maculatus
ENSCVAG00000012310	si:ch211-93g23.2	99	53.676	ENSXMAG00000026715	zgc:162780	99	53.676	Xiphophorus_maculatus