EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCVAG00000012342 (Gene tree)
Gene ID
107092103
Gene Symbol
apobec2b
Alias
apo2b
Full Name
apolipoprotein B mRNA editing enzyme catalytic subunit 2
Gene Type
protein_coding
Species
Cyprinodon_variegatus
Status
putative
Strand
Plus strand
Length
6089 bases
Position
chrKL652516.1:2547381-2553469
Accession
107092103
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCVAP00000010241APOBEC_NPF08210.114.6e-4511
ENSCVAP00000010241APOBEC_CPF05240.142.2e-2511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCVAT00000029484-3987XM_015386396ENSCVAP00000010241266 (aa)XP_015241882UPI000742BB07
Gene Model
Click here to download ENSCVAG00000012342's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000012342's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCVAG00000012342apobec2b6232.353ENSCVAG00000001218aicda8632.353
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCVAG00000012342apobec2b7559.420ENSG00000124701APOBEC29956.306Homo_sapiens
ENSCVAG00000012342apobec2b10077.612ENSAPOG00000019390apobec2b10078.358Acanthochromis_polyacanthus
ENSCVAG00000012342apobec2b6559.444ENSAMEG00000004467APOBEC27159.444Ailuropoda_melanoleuca
ENSCVAG00000012342apobec2b10078.731ENSACIG00000002472APOBEC210074.060Amphilophus_citrinellus
ENSCVAG00000012342apobec2b7156.250ENSACIG00000016370apobec2a7655.897Amphilophus_citrinellus
ENSCVAG00000012342apobec2b10051.481ENSAOCG00000003291apobec2a10050.370Amphiprion_ocellaris
ENSCVAG00000012342apobec2b10078.358ENSAOCG00000023355apobec2b10079.104Amphiprion_ocellaris
ENSCVAG00000012342apobec2b10077.985ENSAPEG00000004591apobec2b10077.985Amphiprion_percula
ENSCVAG00000012342apobec2b9951.301ENSAPEG00000003630apobec2a10050.000Amphiprion_percula
ENSCVAG00000012342apobec2b10074.349ENSATEG00000023043APOBEC210076.208Anabas_testudineus
ENSCVAG00000012342apobec2b9153.200ENSATEG00000000956apobec2a9859.429Anabas_testudineus
ENSCVAG00000012342apobec2b8252.423ENSAPLG00000002895APOBEC210052.423Anas_platyrhynchos
ENSCVAG00000012342apobec2b7652.657ENSACAG00000016506APOBEC29557.865Anolis_carolinensis
ENSCVAG00000012342apobec2b7558.937ENSANAG00000026993APOBEC29955.856Aotus_nancymaae
ENSCVAG00000012342apobec2b6559.884ENSACLG00000026736-9759.884Astatotilapia_calliptera
ENSCVAG00000012342apobec2b10077.985ENSACLG00000007634APOBEC210077.985Astatotilapia_calliptera
ENSCVAG00000012342apobec2b7856.075ENSAMXG00000042992apobec2a9355.508Astyanax_mexicanus
ENSCVAG00000012342apobec2b8260.444ENSAMXG00000015966apobec2b8359.829Astyanax_mexicanus
ENSCVAG00000012342apobec2b7557.971ENSBTAG00000005974APOBEC27354.185Bos_taurus
ENSCVAG00000012342apobec2b7559.420ENSCJAG00000004063APOBEC29956.306Callithrix_jacchus
ENSCVAG00000012342apobec2b7557.971ENSCAFG00000001575APOBEC29257.971Canis_familiaris
ENSCVAG00000012342apobec2b7557.971ENSCAFG00020008306APOBEC29257.971Canis_lupus_dingo
ENSCVAG00000012342apobec2b7557.971ENSCHIG00000026348APOBEC29954.955Capra_hircus
ENSCVAG00000012342apobec2b7558.454ENSTSYG00000008206APOBEC210054.701Carlito_syrichta
ENSCVAG00000012342apobec2b6960.209ENSCAPG00000015084APOBEC29855.556Cavia_aperea
ENSCVAG00000012342apobec2b6960.209ENSCPOG00000036103APOBEC29855.556Cavia_porcellus
ENSCVAG00000012342apobec2b7558.937ENSCCAG00000033987APOBEC29857.078Cebus_capucinus
ENSCVAG00000012342apobec2b7559.420ENSCATG00000010691APOBEC29458.257Cercocebus_atys
ENSCVAG00000012342apobec2b6960.733ENSCLAG00000013817APOBEC29656.422Chinchilla_lanigera
ENSCVAG00000012342apobec2b7559.420ENSCSAG00000011177APOBEC29857.534Chlorocebus_sabaeus
ENSCVAG00000012342apobec2b6560.000ENSCHOG00000008930APOBEC210060.000Choloepus_hoffmanni
ENSCVAG00000012342apobec2b6860.541ENSCPBG00000017469APOBEC28560.753Chrysemys_picta_bellii
ENSCVAG00000012342apobec2b7559.420ENSCANG00000035072APOBEC29857.534Colobus_angolensis_palliatus
ENSCVAG00000012342apobec2b7558.454ENSCGRG00001014983Apobec29258.454Cricetulus_griseus_chok1gshd
ENSCVAG00000012342apobec2b7558.454ENSCGRG00000007835Apobec29258.454Cricetulus_griseus_crigri
ENSCVAG00000012342apobec2b7173.936ENSCSEG00000000690-10062.313Cynoglossus_semilaevis
ENSCVAG00000012342apobec2b10051.481ENSCSEG00000020201apobec2a10051.111Cynoglossus_semilaevis
ENSCVAG00000012342apobec2b10052.727ENSDARG00000018881apobec2a9454.286Danio_rerio
ENSCVAG00000012342apobec2b8561.304ENSDARG00000113992apobec2b8561.207Danio_rerio
ENSCVAG00000012342apobec2b6942.051ENSDNOG00000033914APOBEC29839.013Dasypus_novemcinctus
ENSCVAG00000012342apobec2b6960.209ENSDORG00000006447Apobec29855.357Dipodomys_ordii
ENSCVAG00000012342apobec2b6960.733ENSETEG00000000624APOBEC28360.733Echinops_telfairi
ENSCVAG00000012342apobec2b6656.684ENSEASG00005002937APOBEC29756.684Equus_asinus_asinus
ENSCVAG00000012342apobec2b7757.078ENSECAG00000006576APOBEC29857.078Equus_caballus
ENSCVAG00000012342apobec2b7558.937ENSEEUG00000006046APOBEC29955.856Erinaceus_europaeus
ENSCVAG00000012342apobec2b9951.064ENSELUG00000003736apobec2a9952.128Esox_lucius
ENSCVAG00000012342apobec2b6960.209ENSFCAG00000004108APOBEC29856.164Felis_catus
ENSCVAG00000012342apobec2b6850.000ENSFALG00000003910APOBEC29845.133Ficedula_albicollis
ENSCVAG00000012342apobec2b6959.162ENSFDAG00000006015APOBEC29854.091Fukomys_damarensis
ENSCVAG00000012342apobec2b10081.203ENSFHEG00000005492apobec2b10081.579Fundulus_heteroclitus
ENSCVAG00000012342apobec2b10062.687ENSGMOG00000006819apobec2b10062.687Gadus_morhua
ENSCVAG00000012342apobec2b6561.364ENSGMOG00000007028apobec2a10061.364Gadus_morhua
ENSCVAG00000012342apobec2b6958.730ENSGALG00000003226APOBEC29952.863Gallus_gallus
ENSCVAG00000012342apobec2b10089.850ENSGAFG00000007634apobec2b8789.850Gambusia_affinis
ENSCVAG00000012342apobec2b10071.805ENSGACG00000009663apobec2b9979.821Gasterosteus_aculeatus
ENSCVAG00000012342apobec2b7062.234ENSGACG00000011671apobec2a10062.234Gasterosteus_aculeatus
ENSCVAG00000012342apobec2b6860.541ENSGAGG00000010347APOBEC29754.884Gopherus_agassizii
ENSCVAG00000012342apobec2b7559.420ENSGGOG00000001099APOBEC29955.263Gorilla_gorilla
ENSCVAG00000012342apobec2b10076.493ENSHBUG00000005993apobec2b10076.493Haplochromis_burtoni
ENSCVAG00000012342apobec2b8060.369ENSHBUG00000015890apobec2a9158.407Haplochromis_burtoni
ENSCVAG00000012342apobec2b6958.115ENSHGLG00000017169APOBEC29655.046Heterocephalus_glaber_female
ENSCVAG00000012342apobec2b6958.115ENSHGLG00100019442APOBEC29655.046Heterocephalus_glaber_male
ENSCVAG00000012342apobec2b10074.254ENSHCOG00000002712APOBEC210073.881Hippocampus_comes
ENSCVAG00000012342apobec2b9749.237ENSHCOG00000020319apobec2a8158.291Hippocampus_comes
ENSCVAG00000012342apobec2b8058.447ENSIPUG00000017355apobec2a6556.957Ictalurus_punctatus
ENSCVAG00000012342apobec2b10058.545ENSIPUG00000013784Apobec210059.420Ictalurus_punctatus
ENSCVAG00000012342apobec2b7458.571ENSSTOG00000023643APOBEC29857.534Ictidomys_tridecemlineatus
ENSCVAG00000012342apobec2b7558.937ENSJJAG00000009733Apobec29955.605Jaculus_jaculus
ENSCVAG00000012342apobec2b9981.132ENSKMAG00000020631apobec2b9981.132Kryptolebias_marmoratus
ENSCVAG00000012342apobec2b10071.429ENSLBEG00000009422-10073.571Labrus_bergylta
ENSCVAG00000012342apobec2b9251.200ENSLBEG00000025214apobec2a9055.300Labrus_bergylta
ENSCVAG00000012342apobec2b8459.111ENSLACG00000015985APOBEC29659.111Latimeria_chalumnae
ENSCVAG00000012342apobec2b7463.184ENSLOCG00000012415apobec2b8359.657Lepisosteus_oculatus
ENSCVAG00000012342apobec2b7560.386ENSLAFG00000016563APOBEC29260.386Loxodonta_africana
ENSCVAG00000012342apobec2b7559.420ENSMFAG00000044645APOBEC29857.534Macaca_fascicularis
ENSCVAG00000012342apobec2b7559.420ENSMMUG00000021171APOBEC29857.534Macaca_mulatta
ENSCVAG00000012342apobec2b7559.420ENSMNEG00000045497APOBEC29857.534Macaca_nemestrina
ENSCVAG00000012342apobec2b7559.420ENSMLEG00000028328APOBEC29857.534Mandrillus_leucophaeus
ENSCVAG00000012342apobec2b9851.880ENSMAMG00000023685apobec2a9157.265Mastacembelus_armatus
ENSCVAG00000012342apobec2b10073.091ENSMAMG00000007926APOBEC210074.632Mastacembelus_armatus
ENSCVAG00000012342apobec2b10077.985ENSMZEG00005027159APOBEC210077.778Maylandia_zebra
ENSCVAG00000012342apobec2b8557.143ENSMZEG00005005240-9857.143Maylandia_zebra
ENSCVAG00000012342apobec2b8552.361ENSMGAG00000010173APOBEC29952.361Meleagris_gallopavo
ENSCVAG00000012342apobec2b7558.937ENSMAUG00000011016Apobec29258.937Mesocricetus_auratus
ENSCVAG00000012342apobec2b7756.164ENSMICG00000043339APOBEC29856.164Microcebus_murinus
ENSCVAG00000012342apobec2b7559.420ENSMOCG00000001904Apobec29259.420Microtus_ochrogaster
ENSCVAG00000012342apobec2b10074.436ENSMMOG00000008681apobec2b10074.436Mola_mola
ENSCVAG00000012342apobec2b7754.338ENSMODG00000013090APOBEC29954.338Monodelphis_domestica
ENSCVAG00000012342apobec2b10050.741ENSMALG00000020523apobec2a9354.148Monopterus_albus
ENSCVAG00000012342apobec2b10072.388ENSMALG00000013779APOBEC210070.896Monopterus_albus
ENSCVAG00000012342apobec2b7558.937MGP_CAROLIEiJ_G0021727Apobec29258.937Mus_caroli
ENSCVAG00000012342apobec2b7558.937ENSMUSG00000040694Apobec29258.937Mus_musculus
ENSCVAG00000012342apobec2b7558.937MGP_PahariEiJ_G0020716Apobec29258.937Mus_pahari
ENSCVAG00000012342apobec2b7558.454ENSMPUG00000013691APOBEC29855.702Mustela_putorius_furo
ENSCVAG00000012342apobec2b7557.005ENSMLUG00000011327APOBEC29057.005Myotis_lucifugus
ENSCVAG00000012342apobec2b7557.971ENSNGAG00000013717Apobec29257.971Nannospalax_galili
ENSCVAG00000012342apobec2b10078.358ENSNBRG00000018806apobec2b8977.985Neolamprologus_brichardi
ENSCVAG00000012342apobec2b7063.298ENSNBRG00000021776apobec2a9256.579Neolamprologus_brichardi
ENSCVAG00000012342apobec2b7559.420ENSNLEG00000005057APOBEC29956.306Nomascus_leucogenys
ENSCVAG00000012342apobec2b7755.251ENSMEUG00000011623APOBEC29955.251Notamacropus_eugenii
ENSCVAG00000012342apobec2b7658.571ENSOPRG00000014808APOBEC29258.571Ochotona_princeps
ENSCVAG00000012342apobec2b6960.733ENSODEG00000016183APOBEC29855.556Octodon_degus
ENSCVAG00000012342apobec2b8457.895ENSONIG00000004644-9257.895Oreochromis_niloticus
ENSCVAG00000012342apobec2b10079.104ENSONIG00000012289apobec2b10079.104Oreochromis_niloticus
ENSCVAG00000012342apobec2b6159.524ENSOANG00000000824APOBEC29957.459Ornithorhynchus_anatinus
ENSCVAG00000012342apobec2b7658.571ENSOCUG00000028008APOBEC29358.571Oryctolagus_cuniculus
ENSCVAG00000012342apobec2b10078.571ENSORLG00000022372APOBEC210078.571Oryzias_latipes
ENSCVAG00000012342apobec2b8555.895ENSORLG00000010752apobec2a9755.895Oryzias_latipes
ENSCVAG00000012342apobec2b10078.947ENSORLG00020006164APOBEC210078.947Oryzias_latipes_hni
ENSCVAG00000012342apobec2b8555.895ENSORLG00020004153apobec2a9755.895Oryzias_latipes_hni
ENSCVAG00000012342apobec2b10078.571ENSORLG00015022089-10078.571Oryzias_latipes_hsok
ENSCVAG00000012342apobec2b8555.895ENSORLG00015021781apobec2a9755.895Oryzias_latipes_hsok
ENSCVAG00000012342apobec2b10080.075ENSOMEG00000015449APOBEC210080.075Oryzias_melastigma
ENSCVAG00000012342apobec2b8457.826ENSOMEG00000001311apobec2a9657.826Oryzias_melastigma
ENSCVAG00000012342apobec2b7756.621ENSOGAG00000002632APOBEC29856.621Otolemur_garnettii
ENSCVAG00000012342apobec2b7558.454ENSOARG00000000820APOBEC29955.405Ovis_aries
ENSCVAG00000012342apobec2b7559.420ENSPPAG00000035598APOBEC29955.263Pan_paniscus
ENSCVAG00000012342apobec2b6960.209ENSPPRG00000008530APOBEC29856.164Panthera_pardus
ENSCVAG00000012342apobec2b7557.488ENSPTIG00000011084APOBEC29257.488Panthera_tigris_altaica
ENSCVAG00000012342apobec2b7559.420ENSPTRG00000029679APOBEC29955.263Pan_troglodytes
ENSCVAG00000012342apobec2b7559.420ENSPANG00000007121APOBEC29857.534Papio_anubis
ENSCVAG00000012342apobec2b9758.015ENSPKIG00000004741apobec2b8860.331Paramormyrops_kingsleyae
ENSCVAG00000012342apobec2b9154.918ENSPKIG00000005395apobec2a8760.550Paramormyrops_kingsleyae
ENSCVAG00000012342apobec2b6860.541ENSPSIG00000013480APOBEC29853.333Pelodiscus_sinensis
ENSCVAG00000012342apobec2b10053.903ENSPMGG00000004044apobec2a9952.727Periophthalmus_magnuspinnatus
ENSCVAG00000012342apobec2b10069.343ENSPMGG00000002686APOBEC28068.248Periophthalmus_magnuspinnatus
ENSCVAG00000012342apobec2b7558.937ENSPEMG00000005724Apobec29258.937Peromyscus_maniculatus_bairdii
ENSCVAG00000012342apobec2b10088.722ENSPFOG00000001216apobec2b10088.722Poecilia_formosa
ENSCVAG00000012342apobec2b10089.098ENSPLAG00000002074apobec2b10089.098Poecilia_latipinna
ENSCVAG00000012342apobec2b10089.098ENSPMEG00000017537apobec2b10089.098Poecilia_mexicana
ENSCVAG00000012342apobec2b10088.722ENSPREG00000020060apobec2b8788.722Poecilia_reticulata
ENSCVAG00000012342apobec2b7558.937ENSPPYG00000016586APOBEC29955.856Pongo_abelii
ENSCVAG00000012342apobec2b6961.780ENSPCAG00000011433APOBEC210061.780Procavia_capensis
ENSCVAG00000012342apobec2b7559.420ENSPCOG00000026935APOBEC29857.078Propithecus_coquereli
ENSCVAG00000012342apobec2b6959.686ENSPVAG00000008316APOBEC29954.054Pteropus_vampyrus
ENSCVAG00000012342apobec2b10077.985ENSPNYG00000016747apobec2b10077.985Pundamilia_nyererei
ENSCVAG00000012342apobec2b9855.133ENSPNAG00000010382apobec2a9754.924Pygocentrus_nattereri
ENSCVAG00000012342apobec2b8062.500ENSPNAG00000013666apobec2b8361.207Pygocentrus_nattereri
ENSCVAG00000012342apobec2b7558.454ENSRNOG00000012303Apobec29258.454Rattus_norvegicus
ENSCVAG00000012342apobec2b7559.420ENSRBIG00000044756APOBEC29956.306Rhinopithecus_bieti
ENSCVAG00000012342apobec2b7559.420ENSRROG00000030082APOBEC29956.306Rhinopithecus_roxellana
ENSCVAG00000012342apobec2b7558.937ENSSBOG00000028496APOBEC29955.856Saimiri_boliviensis_boliviensis
ENSCVAG00000012342apobec2b6960.526ENSSHAG00000017771APOBEC29955.909Sarcophilus_harrisii
ENSCVAG00000012342apobec2b6355.621ENSSFOG00015005437-7155.621Scleropages_formosus
ENSCVAG00000012342apobec2b9062.241ENSSFOG00015022920apobec28264.159Scleropages_formosus
ENSCVAG00000012342apobec2b8378.947ENSSMAG00000005110APOBEC210075.636Scophthalmus_maximus
ENSCVAG00000012342apobec2b9152.846ENSSMAG00000001011apobec2a6954.545Scophthalmus_maximus
ENSCVAG00000012342apobec2b10076.866ENSSDUG00000014543apobec2b10077.239Seriola_dumerili
ENSCVAG00000012342apobec2b10051.852ENSSDUG00000007013apobec2a10050.741Seriola_dumerili
ENSCVAG00000012342apobec2b10076.866ENSSLDG00000003321apobec2b10077.239Seriola_lalandi_dorsalis
ENSCVAG00000012342apobec2b10052.768ENSSLDG00000020199apobec2a10051.095Seriola_lalandi_dorsalis
ENSCVAG00000012342apobec2b6553.889ENSSPUG00000010839APOBEC28755.000Sphenodon_punctatus
ENSCVAG00000012342apobec2b9551.938ENSSPAG00000016299-8858.140Stegastes_partitus
ENSCVAG00000012342apobec2b10079.478ENSSPAG00000005253apobec2b10080.224Stegastes_partitus
ENSCVAG00000012342apobec2b7557.971ENSSSCG00000036018APOBEC29257.971Sus_scrofa
ENSCVAG00000012342apobec2b6858.511ENSTGUG00000018533APOBEC210051.965Taeniopygia_guttata
ENSCVAG00000012342apobec2b10071.429ENSTRUG00000012839apobec2b10070.301Takifugu_rubripes
ENSCVAG00000012342apobec2b7460.199ENSTRUG00000009123apobec2a9654.430Takifugu_rubripes
ENSCVAG00000012342apobec2b10071.429ENSTNIG00000015038apobec2b10070.301Tetraodon_nigroviridis
ENSCVAG00000012342apobec2b7558.454ENSTBEG00000003553APOBEC29955.405Tupaia_belangeri
ENSCVAG00000012342apobec2b7753.812ENSTTRG00000013392APOBEC29953.812Tursiops_truncatus
ENSCVAG00000012342apobec2b7558.454ENSUAMG00000027667APOBEC29955.752Ursus_americanus
ENSCVAG00000012342apobec2b7557.971ENSVVUG00000026617APOBEC29257.971Vulpes_vulpes
ENSCVAG00000012342apobec2b6951.256ENSXETG00000008007apobec28451.256Xenopus_tropicalis
ENSCVAG00000012342apobec2b10087.037ENSXCOG00000007398apobec2b10087.407Xiphophorus_couchianus
ENSCVAG00000012342apobec2b10087.778ENSXMAG00000008134apobec2b10088.148Xiphophorus_maculatus

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