EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000012411 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 383 bases
Position: chrKL652708.1:978830-979212
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000010303	SM-ATX	PF14438.6	1.3e-08	1	1
ENSCVAP00000010303	LSM14	PF12701.7	3.2e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000016972	-	294	-	ENSCVAP00000010303	97 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000012411's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000012411's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000012411	-	99	63.542	ENSCVAG00000005570	-	99	63.542

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000012411	-	98	81.053	ENSAPOG00000009997	-	88	81.053	Acanthochromis_polyacanthus
ENSCVAG00000012411	-	99	85.417	ENSACIG00000003134	-	78	85.417	Amphilophus_citrinellus
ENSCVAG00000012411	-	100	83.505	ENSAPEG00000013779	-	96	83.505	Amphiprion_percula
ENSCVAG00000012411	-	84	91.358	ENSATEG00000015882	-	92	91.358	Anabas_testudineus
ENSCVAG00000012411	-	100	90.722	ENSGAFG00000013718	-	100	90.722	Gambusia_affinis
ENSCVAG00000012411	-	99	66.667	ENSHBUG00000011864	-	72	66.667	Haplochromis_burtoni
ENSCVAG00000012411	-	97	84.043	ENSHBUG00000012323	-	90	84.043	Haplochromis_burtoni
ENSCVAG00000012411	-	94	64.835	ENSHCOG00000004862	-	83	64.835	Hippocampus_comes
ENSCVAG00000012411	-	99	90.625	ENSKMAG00000012850	-	99	90.625	Kryptolebias_marmoratus
ENSCVAG00000012411	-	93	88.889	ENSKMAG00000016674	-	85	88.421	Kryptolebias_marmoratus
ENSCVAG00000012411	-	98	68.421	ENSLBEG00000016427	lsm14b	66	68.421	Labrus_bergylta
ENSCVAG00000012411	-	99	86.458	ENSLBEG00000007971	-	92	86.458	Labrus_bergylta
ENSCVAG00000012411	-	98	69.474	ENSNGAG00000016305	-	76	69.474	Nannospalax_galili
ENSCVAG00000012411	-	97	82.979	ENSNBRG00000022370	-	90	82.979	Neolamprologus_brichardi
ENSCVAG00000012411	-	99	67.708	ENSNBRG00000022606	-	72	67.708	Neolamprologus_brichardi
ENSCVAG00000012411	-	100	83.673	ENSORLG00020018184	-	100	83.673	Oryzias_latipes_hni
ENSCVAG00000012411	-	81	84.810	ENSOMEG00000007241	-	95	84.810	Oryzias_melastigma
ENSCVAG00000012411	-	99	71.875	ENSPKIG00000003275	lsm14b	89	71.875	Paramormyrops_kingsleyae
ENSCVAG00000012411	-	84	76.543	ENSPMGG00000004595	-	82	76.543	Periophthalmus_magnuspinnatus
ENSCVAG00000012411	-	98	68.421	ENSPMGG00000014569	lsm14b	59	68.421	Periophthalmus_magnuspinnatus
ENSCVAG00000012411	-	84	91.358	ENSPREG00000007817	-	93	91.358	Poecilia_reticulata
ENSCVAG00000012411	-	99	66.667	ENSPREG00000016484	-	62	66.667	Poecilia_reticulata
ENSCVAG00000012411	-	97	84.043	ENSPNYG00000021706	-	89	84.043	Pundamilia_nyererei
ENSCVAG00000012411	-	99	66.667	ENSPNYG00000019601	-	72	66.667	Pundamilia_nyererei
ENSCVAG00000012411	-	92	86.667	ENSSLDG00000011341	-	98	86.667	Seriola_lalandi_dorsalis
ENSCVAG00000012411	-	88	65.882	ENSSLDG00000011706	-	92	65.882	Seriola_lalandi_dorsalis
ENSCVAG00000012411	-	92	86.667	ENSSLDG00000012686	-	98	86.667	Seriola_lalandi_dorsalis
ENSCVAG00000012411	-	98	83.158	ENSSPAG00000018837	-	94	83.158	Stegastes_partitus
ENSCVAG00000012411	-	89	89.535	ENSXCOG00000011423	-	95	89.535	Xiphophorus_couchianus
ENSCVAG00000012411	-	94	68.132	ENSXCOG00000017365	-	92	68.132	Xiphophorus_couchianus
ENSCVAG00000012411	-	89	88.372	ENSXMAG00000015481	-	95	88.372	Xiphophorus_maculatus