EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000012420 (Gene tree)
Gene ID: 107097651
Gene Symbol: si:dkey-89b17.4
Alias: fj14g06|fj60g01|fk87f09|wu:fj14g06|wu:fj60g01|wu:fk87f09
Full Name: zinc finger protein 646-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 17378 bases
Position: chrKL653213.1:269220-286597
Accession: 107097651
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000010320	zf-C2H2	PF00096.26	3.1e-54	1	5
ENSCVAP00000010320	zf-C2H2	PF00096.26	3.1e-54	2	5
ENSCVAP00000010320	zf-C2H2	PF00096.26	3.1e-54	3	5
ENSCVAP00000010320	zf-C2H2	PF00096.26	3.1e-54	4	5
ENSCVAP00000010320	zf-C2H2	PF00096.26	3.1e-54	5	5
ENSCVAP00000010320	zf-met	PF12874.7	3.5e-08	1	2
ENSCVAP00000010320	zf-met	PF12874.7	3.5e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000016983	-	6084	XM_015394879	ENSCVAP00000010320	1247 (aa)	XP_015250365	UPI000742A5C2

Gene Model

Click here to download ENSCVAG00000012420's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000012420's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000012420	si:dkey-89b17.4	59	38.053	ENSCVAG00000015616	-	84	38.053
ENSCVAG00000012420	si:dkey-89b17.4	59	31.429	ENSCVAG00000000419	-	89	32.800
ENSCVAG00000012420	si:dkey-89b17.4	95	38.889	ENSCVAG00000017890	-	94	30.769
ENSCVAG00000012420	si:dkey-89b17.4	66	30.802	ENSCVAG00000011469	-	80	30.932
ENSCVAG00000012420	si:dkey-89b17.4	95	31.707	ENSCVAG00000001369	-	77	31.707
ENSCVAG00000012420	si:dkey-89b17.4	89	34.211	ENSCVAG00000016796	-	88	38.806
ENSCVAG00000012420	si:dkey-89b17.4	90	30.075	ENSCVAG00000019767	-	54	33.945
ENSCVAG00000012420	si:dkey-89b17.4	81	31.679	ENSCVAG00000014622	-	86	31.679
ENSCVAG00000012420	si:dkey-89b17.4	85	30.000	ENSCVAG00000003497	-	85	33.721
ENSCVAG00000012420	si:dkey-89b17.4	77	35.135	ENSCVAG00000006389	-	94	35.135
ENSCVAG00000012420	si:dkey-89b17.4	87	41.489	ENSCVAG00000012399	-	88	41.489
ENSCVAG00000012420	si:dkey-89b17.4	63	31.667	ENSCVAG00000017515	-	86	31.667
ENSCVAG00000012420	si:dkey-89b17.4	79	30.769	ENSCVAG00000018507	-	80	30.769
ENSCVAG00000012420	si:dkey-89b17.4	70	35.238	ENSCVAG00000003250	-	99	30.357
ENSCVAG00000012420	si:dkey-89b17.4	62	30.968	ENSCVAG00000011334	-	81	35.088
ENSCVAG00000012420	si:dkey-89b17.4	69	37.391	ENSCVAG00000004368	-	74	37.391
ENSCVAG00000012420	si:dkey-89b17.4	61	31.176	ENSCVAG00000009747	-	55	31.176
ENSCVAG00000012420	si:dkey-89b17.4	95	30.292	ENSCVAG00000012543	-	100	32.143
ENSCVAG00000012420	si:dkey-89b17.4	99	33.333	ENSCVAG00000022991	-	92	33.333
ENSCVAG00000012420	si:dkey-89b17.4	70	30.233	ENSCVAG00000003512	-	84	30.588
ENSCVAG00000012420	si:dkey-89b17.4	55	30.508	ENSCVAG00000016534	-	53	30.508
ENSCVAG00000012420	si:dkey-89b17.4	62	32.342	ENSCVAG00000023054	-	59	31.461
ENSCVAG00000012420	si:dkey-89b17.4	75	31.474	ENSCVAG00000010160	-	70	33.333
ENSCVAG00000012420	si:dkey-89b17.4	96	32.700	ENSCVAG00000021107	-	83	37.069
ENSCVAG00000012420	si:dkey-89b17.4	90	33.735	ENSCVAG00000018383	-	82	33.735
ENSCVAG00000012420	si:dkey-89b17.4	64	35.833	ENSCVAG00000021225	-	79	35.833
ENSCVAG00000012420	si:dkey-89b17.4	93	36.697	ENSCVAG00000006673	-	58	36.697
ENSCVAG00000012420	si:dkey-89b17.4	96	40.367	ENSCVAG00000012180	-	97	30.132
ENSCVAG00000012420	si:dkey-89b17.4	59	34.959	ENSCVAG00000022174	-	56	34.959
ENSCVAG00000012420	si:dkey-89b17.4	69	35.065	ENSCVAG00000016898	-	86	38.235
ENSCVAG00000012420	si:dkey-89b17.4	50	30.483	ENSCVAG00000018135	-	88	41.818
ENSCVAG00000012420	si:dkey-89b17.4	95	36.585	ENSCVAG00000012248	-	92	36.885
ENSCVAG00000012420	si:dkey-89b17.4	58	30.556	ENSCVAG00000004508	-	81	30.556
ENSCVAG00000012420	si:dkey-89b17.4	90	30.588	ENSCVAG00000003428	-	99	30.588

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000012420	si:dkey-89b17.4	100	91.183	ENSAPOG00000018015	si:dkey-89b17.4	100	91.263	Acanthochromis_polyacanthus
ENSCVAG00000012420	si:dkey-89b17.4	98	42.469	ENSAPOG00000020151	znf646	98	42.613	Acanthochromis_polyacanthus
ENSCVAG00000012420	si:dkey-89b17.4	100	87.997	ENSACIG00000001025	si:dkey-89b17.4	100	87.997	Amphilophus_citrinellus
ENSCVAG00000012420	si:dkey-89b17.4	96	54.916	ENSACIG00000023049	znf646	99	53.571	Amphilophus_citrinellus
ENSCVAG00000012420	si:dkey-89b17.4	96	41.997	ENSAOCG00000012062	znf646	98	41.959	Amphiprion_ocellaris
ENSCVAG00000012420	si:dkey-89b17.4	100	91.501	ENSAOCG00000018684	si:dkey-89b17.4	100	91.422	Amphiprion_ocellaris
ENSCVAG00000012420	si:dkey-89b17.4	100	91.501	ENSAPEG00000007719	si:dkey-89b17.4	100	91.422	Amphiprion_percula
ENSCVAG00000012420	si:dkey-89b17.4	98	41.323	ENSAPEG00000006427	znf646	98	40.970	Amphiprion_percula
ENSCVAG00000012420	si:dkey-89b17.4	100	90.598	ENSATEG00000016814	si:dkey-89b17.4	100	90.518	Anabas_testudineus
ENSCVAG00000012420	si:dkey-89b17.4	96	42.114	ENSATEG00000015206	znf646	98	42.192	Anabas_testudineus
ENSCVAG00000012420	si:dkey-89b17.4	96	42.408	ENSACLG00000012712	znf646	98	42.567	Astatotilapia_calliptera
ENSCVAG00000012420	si:dkey-89b17.4	100	89.770	ENSACLG00000016017	si:dkey-89b17.4	100	89.770	Astatotilapia_calliptera
ENSCVAG00000012420	si:dkey-89b17.4	99	65.900	ENSAMXG00000001155	si:dkey-89b17.4	99	64.258	Astyanax_mexicanus
ENSCVAG00000012420	si:dkey-89b17.4	98	40.180	ENSAMXG00000035525	znf646	98	39.458	Astyanax_mexicanus
ENSCVAG00000012420	si:dkey-89b17.4	96	40.456	ENSCSEG00000012389	znf646	98	38.833	Cynoglossus_semilaevis
ENSCVAG00000012420	si:dkey-89b17.4	98	80.735	ENSCSEG00000010769	si:dkey-89b17.4	98	80.653	Cynoglossus_semilaevis
ENSCVAG00000012420	si:dkey-89b17.4	97	41.008	ENSDARG00000061424	znf646	98	48.214	Danio_rerio
ENSCVAG00000012420	si:dkey-89b17.4	99	65.467	ENSDARG00000075545	si:dkey-89b17.4	99	64.018	Danio_rerio
ENSCVAG00000012420	si:dkey-89b17.4	96	73.068	ENSELUG00000015516	si:dkey-89b17.4	98	72.478	Esox_lucius
ENSCVAG00000012420	si:dkey-89b17.4	96	41.776	ENSELUG00000010423	znf646	98	48.148	Esox_lucius
ENSCVAG00000012420	si:dkey-89b17.4	100	94.564	ENSFHEG00000019457	si:dkey-89b17.4	100	94.644	Fundulus_heteroclitus
ENSCVAG00000012420	si:dkey-89b17.4	95	59.615	ENSFHEG00000000561	znf646	98	43.590	Fundulus_heteroclitus
ENSCVAG00000012420	si:dkey-89b17.4	96	49.004	ENSGMOG00000016554	znf646	99	57.143	Gadus_morhua
ENSCVAG00000012420	si:dkey-89b17.4	100	94.712	ENSGAFG00000000345	si:dkey-89b17.4	100	95.913	Gambusia_affinis
ENSCVAG00000012420	si:dkey-89b17.4	74	55.556	ENSGAFG00000016353	-	87	55.556	Gambusia_affinis
ENSCVAG00000012420	si:dkey-89b17.4	96	60.377	ENSGACG00000008733	znf646	85	60.377	Gasterosteus_aculeatus
ENSCVAG00000012420	si:dkey-89b17.4	98	75.904	ENSGACG00000014714	si:dkey-89b17.4	99	75.904	Gasterosteus_aculeatus
ENSCVAG00000012420	si:dkey-89b17.4	96	42.498	ENSHBUG00000004840	znf646	98	42.723	Haplochromis_burtoni
ENSCVAG00000012420	si:dkey-89b17.4	100	89.849	ENSHBUG00000013093	si:dkey-89b17.4	100	89.849	Haplochromis_burtoni
ENSCVAG00000012420	si:dkey-89b17.4	100	85.646	ENSHCOG00000001901	si:dkey-89b17.4	100	85.408	Hippocampus_comes
ENSCVAG00000012420	si:dkey-89b17.4	99	39.920	ENSHCOG00000014890	znf646	100	40.145	Hippocampus_comes
ENSCVAG00000012420	si:dkey-89b17.4	96	66.000	ENSIPUG00000012845	si:dkey-89b17.4	98	64.607	Ictalurus_punctatus
ENSCVAG00000012420	si:dkey-89b17.4	98	41.314	ENSIPUG00000018102	znf646	99	40.212	Ictalurus_punctatus
ENSCVAG00000012420	si:dkey-89b17.4	94	40.887	ENSKMAG00000011982	znf646	98	40.632	Kryptolebias_marmoratus
ENSCVAG00000012420	si:dkey-89b17.4	100	91.090	ENSKMAG00000014037	si:dkey-89b17.4	100	91.647	Kryptolebias_marmoratus
ENSCVAG00000012420	si:dkey-89b17.4	100	89.428	ENSLBEG00000020291	si:dkey-89b17.4	100	89.348	Labrus_bergylta
ENSCVAG00000012420	si:dkey-89b17.4	98	41.537	ENSLBEG00000016562	znf646	99	39.846	Labrus_bergylta
ENSCVAG00000012420	si:dkey-89b17.4	96	46.774	ENSLOCG00000003238	si:dkey-89b17.4	99	46.774	Lepisosteus_oculatus
ENSCVAG00000012420	si:dkey-89b17.4	96	43.273	ENSMAMG00000009313	znf646	98	42.525	Mastacembelus_armatus
ENSCVAG00000012420	si:dkey-89b17.4	100	90.159	ENSMAMG00000009604	si:dkey-89b17.4	100	90.000	Mastacembelus_armatus
ENSCVAG00000012420	si:dkey-89b17.4	96	42.408	ENSMZEG00005011264	znf646	98	42.567	Maylandia_zebra
ENSCVAG00000012420	si:dkey-89b17.4	100	89.770	ENSMZEG00005003901	si:dkey-89b17.4	100	89.770	Maylandia_zebra
ENSCVAG00000012420	si:dkey-89b17.4	100	86.963	ENSMMOG00000012741	si:dkey-89b17.4	100	87.122	Mola_mola
ENSCVAG00000012420	si:dkey-89b17.4	96	42.662	ENSMMOG00000002311	znf646	98	42.641	Mola_mola
ENSCVAG00000012420	si:dkey-89b17.4	84	39.655	ENSMALG00000002274	-	99	39.655	Monopterus_albus
ENSCVAG00000012420	si:dkey-89b17.4	100	90.254	ENSMALG00000019558	si:dkey-89b17.4	100	90.333	Monopterus_albus
ENSCVAG00000012420	si:dkey-89b17.4	98	89.725	ENSNBRG00000020314	si:dkey-89b17.4	99	89.725	Neolamprologus_brichardi
ENSCVAG00000012420	si:dkey-89b17.4	96	42.644	ENSNBRG00000022534	znf646	98	42.567	Neolamprologus_brichardi
ENSCVAG00000012420	si:dkey-89b17.4	96	42.466	ENSONIG00000019947	-	99	38.624	Oreochromis_niloticus
ENSCVAG00000012420	si:dkey-89b17.4	96	71.781	ENSONIG00000009324	si:dkey-89b17.4	99	71.781	Oreochromis_niloticus
ENSCVAG00000012420	si:dkey-89b17.4	97	38.756	ENSORLG00000007885	znf646	99	38.268	Oryzias_latipes
ENSCVAG00000012420	si:dkey-89b17.4	100	88.179	ENSORLG00000024255	si:dkey-89b17.4	100	88.019	Oryzias_latipes
ENSCVAG00000012420	si:dkey-89b17.4	98	38.578	ENSORLG00020010285	znf646	99	38.125	Oryzias_latipes_hni
ENSCVAG00000012420	si:dkey-89b17.4	96	38.898	ENSORLG00015008733	znf646	99	38.425	Oryzias_latipes_hsok
ENSCVAG00000012420	si:dkey-89b17.4	96	39.696	ENSOMEG00000015658	znf646	99	39.061	Oryzias_melastigma
ENSCVAG00000012420	si:dkey-89b17.4	100	88.489	ENSOMEG00000020587	si:dkey-89b17.4	100	88.480	Oryzias_melastigma
ENSCVAG00000012420	si:dkey-89b17.4	95	41.837	ENSPMGG00000004639	znf646	98	32.967	Periophthalmus_magnuspinnatus
ENSCVAG00000012420	si:dkey-89b17.4	97	70.200	ENSPMGG00000015931	-	98	70.570	Periophthalmus_magnuspinnatus
ENSCVAG00000012420	si:dkey-89b17.4	100	95.112	ENSPFOG00000008241	si:dkey-89b17.4	100	95.994	Poecilia_formosa
ENSCVAG00000012420	si:dkey-89b17.4	95	35.104	ENSPFOG00000004826	-	99	39.437	Poecilia_formosa
ENSCVAG00000012420	si:dkey-89b17.4	97	51.667	ENSPLAG00000010454	-	98	35.146	Poecilia_latipinna
ENSCVAG00000012420	si:dkey-89b17.4	100	96.314	ENSPLAG00000011382	si:dkey-89b17.4	100	96.314	Poecilia_latipinna
ENSCVAG00000012420	si:dkey-89b17.4	100	95.112	ENSPMEG00000000141	si:dkey-89b17.4	100	95.994	Poecilia_mexicana
ENSCVAG00000012420	si:dkey-89b17.4	98	46.341	ENSPMEG00000018283	znf646	98	35.565	Poecilia_mexicana
ENSCVAG00000012420	si:dkey-89b17.4	93	50.000	ENSPREG00000017637	znf646	98	37.441	Poecilia_reticulata
ENSCVAG00000012420	si:dkey-89b17.4	100	96.154	ENSPREG00000012579	si:dkey-89b17.4	100	96.154	Poecilia_reticulata
ENSCVAG00000012420	si:dkey-89b17.4	100	89.849	ENSPNYG00000011901	si:dkey-89b17.4	100	89.849	Pundamilia_nyererei
ENSCVAG00000012420	si:dkey-89b17.4	96	42.408	ENSPNYG00000017692	znf646	98	42.567	Pundamilia_nyererei
ENSCVAG00000012420	si:dkey-89b17.4	98	40.716	ENSPNAG00000000750	znf646	99	39.551	Pygocentrus_nattereri
ENSCVAG00000012420	si:dkey-89b17.4	96	65.852	ENSPNAG00000022072	si:dkey-89b17.4	98	64.286	Pygocentrus_nattereri
ENSCVAG00000012420	si:dkey-89b17.4	98	39.674	ENSSFOG00015004737	si:dkey-89b17.4	99	40.121	Scleropages_formosus
ENSCVAG00000012420	si:dkey-89b17.4	98	42.000	ENSSMAG00000012378	znf646	98	41.416	Scophthalmus_maximus
ENSCVAG00000012420	si:dkey-89b17.4	100	91.097	ENSSDUG00000015931	si:dkey-89b17.4	100	90.938	Seriola_dumerili
ENSCVAG00000012420	si:dkey-89b17.4	98	42.690	ENSSDUG00000002675	znf646	98	42.056	Seriola_dumerili
ENSCVAG00000012420	si:dkey-89b17.4	98	42.567	ENSSLDG00000018521	znf646	98	41.933	Seriola_lalandi_dorsalis
ENSCVAG00000012420	si:dkey-89b17.4	100	91.176	ENSSLDG00000012415	si:dkey-89b17.4	100	91.017	Seriola_lalandi_dorsalis
ENSCVAG00000012420	si:dkey-89b17.4	100	91.501	ENSSPAG00000018810	si:dkey-89b17.4	100	91.342	Stegastes_partitus
ENSCVAG00000012420	si:dkey-89b17.4	98	42.113	ENSSPAG00000016701	znf646	98	60.714	Stegastes_partitus
ENSCVAG00000012420	si:dkey-89b17.4	98	41.330	ENSTRUG00000025597	znf646	99	40.379	Takifugu_rubripes
ENSCVAG00000012420	si:dkey-89b17.4	100	86.581	ENSTRUG00000020495	si:dkey-89b17.4	100	86.661	Takifugu_rubripes
ENSCVAG00000012420	si:dkey-89b17.4	97	44.498	ENSTNIG00000001159	si:dkey-89b17.4	100	41.860	Tetraodon_nigroviridis
ENSCVAG00000012420	si:dkey-89b17.4	96	43.405	ENSTNIG00000000073	znf646	98	36.881	Tetraodon_nigroviridis
ENSCVAG00000012420	si:dkey-89b17.4	96	41.237	ENSXCOG00000002714	-	94	41.237	Xiphophorus_couchianus
ENSCVAG00000012420	si:dkey-89b17.4	100	93.269	ENSXCOG00000001645	si:dkey-89b17.4	100	93.269	Xiphophorus_couchianus
ENSCVAG00000012420	si:dkey-89b17.4	97	38.710	ENSXMAG00000018743	-	93	39.247	Xiphophorus_maculatus
ENSCVAG00000012420	si:dkey-89b17.4	100	94.712	ENSXMAG00000024528	si:dkey-89b17.4	100	95.913	Xiphophorus_maculatus