EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000012433 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 2577 bases
Position: chrKL652708.1:976127-978703
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000010316	FDF	PF09532.10	6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000029524	-	624	-	ENSCVAP00000010316	207 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000012433's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000012433's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000012433	-	88	36.402	ENSG00000149657	LSM14B	65	37.255	Homo_sapiens
ENSCVAG00000012433	-	89	35.146	ENSAPOG00000001780	lsm14b	62	35.918	Acanthochromis_polyacanthus
ENSCVAG00000012433	-	79	49.112	ENSAPOG00000010003	-	90	49.112	Acanthochromis_polyacanthus
ENSCVAG00000012433	-	88	31.295	ENSAMEG00000013430	LSM14B	69	32.881	Ailuropoda_melanoleuca
ENSCVAG00000012433	-	86	36.406	ENSACIG00000012266	lsm14b	61	41.150	Amphilophus_citrinellus
ENSCVAG00000012433	-	90	50.235	ENSACIG00000003147	LSM14B	96	54.825	Amphilophus_citrinellus
ENSCVAG00000012433	-	96	50.763	ENSAOCG00000006667	LSM14B	66	50.382	Amphiprion_ocellaris
ENSCVAG00000012433	-	89	35.146	ENSAOCG00000012380	lsm14b	62	35.918	Amphiprion_ocellaris
ENSCVAG00000012433	-	89	38.767	ENSAPEG00000023633	lsm14b	62	38.627	Amphiprion_percula
ENSCVAG00000012433	-	90	62.712	ENSATEG00000015895	LSM14B	64	60.317	Anabas_testudineus
ENSCVAG00000012433	-	89	37.607	ENSATEG00000016603	lsm14b	63	39.095	Anabas_testudineus
ENSCVAG00000012433	-	88	32.500	ENSAPLG00000013203	LSM14B	74	34.680	Anas_platyrhynchos
ENSCVAG00000012433	-	88	34.156	ENSACAG00000016195	LSM14B	66	36.154	Anolis_carolinensis
ENSCVAG00000012433	-	88	35.983	ENSANAG00000037915	LSM14B	65	36.719	Aotus_nancymaae
ENSCVAG00000012433	-	89	34.286	ENSACLG00000019663	lsm14b	63	36.614	Astatotilapia_calliptera
ENSCVAG00000012433	-	89	36.328	ENSAMXG00000002865	lsm14b	66	40.000	Astyanax_mexicanus
ENSCVAG00000012433	-	88	30.576	ENSBTAG00000021558	LSM14B	68	32.542	Bos_taurus
ENSCVAG00000012433	-	88	35.983	ENSCJAG00000014434	LSM14B	65	36.719	Callithrix_jacchus
ENSCVAG00000012433	-	88	31.655	ENSCAFG00000012518	LSM14B	74	32.542	Canis_familiaris
ENSCVAG00000012433	-	88	35.983	ENSCAFG00020022150	LSM14B	65	37.500	Canis_lupus_dingo
ENSCVAG00000012433	-	88	36.402	ENSCHIG00000010284	-	65	37.891	Capra_hircus
ENSCVAG00000012433	-	93	31.356	ENSCHIG00000022681	-	64	33.051	Capra_hircus
ENSCVAG00000012433	-	88	35.983	ENSTSYG00000031914	LSM14B	65	37.109	Carlito_syrichta
ENSCVAG00000012433	-	88	36.402	ENSCAPG00000013059	LSM14B	95	32.203	Cavia_aperea
ENSCVAG00000012433	-	88	36.820	ENSCPOG00000038080	LSM14B	95	32.542	Cavia_porcellus
ENSCVAG00000012433	-	55	39.683	ENSCCAG00000024900	-	62	36.979	Cebus_capucinus
ENSCVAG00000012433	-	88	35.983	ENSCCAG00000021267	LSM14B	65	36.719	Cebus_capucinus
ENSCVAG00000012433	-	88	36.820	ENSCATG00000036006	LSM14B	65	37.647	Cercocebus_atys
ENSCVAG00000012433	-	88	37.657	ENSCLAG00000003186	LSM14B	95	32.542	Chinchilla_lanigera
ENSCVAG00000012433	-	88	31.295	ENSCSAG00000015729	LSM14B	68	32.313	Chlorocebus_sabaeus
ENSCVAG00000012433	-	57	35.115	ENSCHOG00000006997	-	93	31.225	Choloepus_hoffmanni
ENSCVAG00000012433	-	86	31.985	ENSCPBG00000027065	LSM14B	67	33.910	Chrysemys_picta_bellii
ENSCVAG00000012433	-	88	36.402	ENSCANG00000036986	LSM14B	73	37.109	Colobus_angolensis_palliatus
ENSCVAG00000012433	-	88	36.402	ENSCGRG00001018399	Lsm14b	95	31.864	Cricetulus_griseus_chok1gshd
ENSCVAG00000012433	-	77	37.368	ENSCGRG00000002484	-	93	38.164	Cricetulus_griseus_crigri
ENSCVAG00000012433	-	88	31.295	ENSCGRG00000006111	-	97	31.864	Cricetulus_griseus_crigri
ENSCVAG00000012433	-	85	36.596	ENSCSEG00000004722	lsm14b	63	38.956	Cynoglossus_semilaevis
ENSCVAG00000012433	-	96	42.308	ENSCSEG00000020669	LSM14B	66	43.462	Cynoglossus_semilaevis
ENSCVAG00000012433	-	53	42.105	ENSCSEG00000019080	-	78	46.269	Cynoglossus_semilaevis
ENSCVAG00000012433	-	88	35.124	ENSDARG00000025386	lsm14b	66	38.224	Danio_rerio
ENSCVAG00000012433	-	88	32.014	ENSDNOG00000025246	LSM14B	95	33.333	Dasypus_novemcinctus
ENSCVAG00000012433	-	88	36.820	ENSDORG00000016683	Lsm14b	95	32.313	Dipodomys_ordii
ENSCVAG00000012433	-	73	31.401	ENSETEG00000011188	-	90	32.850	Echinops_telfairi
ENSCVAG00000012433	-	91	32.510	ENSETEG00000001869	-	65	32.677	Echinops_telfairi
ENSCVAG00000012433	-	88	40.654	ENSEASG00005023218	LSM14B	94	41.304	Equus_asinus_asinus
ENSCVAG00000012433	-	88	37.238	ENSECAG00000010659	LSM14B	65	37.500	Equus_caballus
ENSCVAG00000012433	-	94	37.705	ENSELUG00000005780	lsm14b	64	38.645	Esox_lucius
ENSCVAG00000012433	-	87	41.525	ENSELUG00000016299	LSM14B	65	43.137	Esox_lucius
ENSCVAG00000012433	-	88	36.402	ENSFCAG00000003248	LSM14B	65	37.891	Felis_catus
ENSCVAG00000012433	-	88	31.673	ENSFALG00000010618	LSM14B	76	33.557	Ficedula_albicollis
ENSCVAG00000012433	-	88	38.075	ENSFDAG00000002214	LSM14B	95	32.653	Fukomys_damarensis
ENSCVAG00000012433	-	88	34.322	ENSFHEG00000006237	lsm14b	64	35.484	Fundulus_heteroclitus
ENSCVAG00000012433	-	92	43.204	ENSGMOG00000017115	lsm14b	58	44.660	Gadus_morhua
ENSCVAG00000012433	-	88	35.510	ENSGALG00000005125	LSM14B	66	38.168	Gallus_gallus
ENSCVAG00000012433	-	89	32.780	ENSGAFG00000020318	lsm14b	65	33.597	Gambusia_affinis
ENSCVAG00000012433	-	97	67.943	ENSGAFG00000013723	LSM14B	96	67.943	Gambusia_affinis
ENSCVAG00000012433	-	88	35.622	ENSGACG00000009973	lsm14b	64	38.115	Gasterosteus_aculeatus
ENSCVAG00000012433	-	78	34.807	ENSGAGG00000004106	LSM14B	87	36.596	Gopherus_agassizii
ENSCVAG00000012433	-	88	36.402	ENSGGOG00000005630	LSM14B	95	32.313	Gorilla_gorilla
ENSCVAG00000012433	-	88	34.728	ENSHGLG00000015055	LSM14B	95	31.633	Heterocephalus_glaber_female
ENSCVAG00000012433	-	86	34.764	ENSHGLG00100015273	LSM14B	94	31.597	Heterocephalus_glaber_male
ENSCVAG00000012433	-	98	45.247	ENSHCOG00000018747	LSM14B	69	41.509	Hippocampus_comes
ENSCVAG00000012433	-	89	41.624	ENSHCOG00000004867	lsm14b	90	42.857	Hippocampus_comes
ENSCVAG00000012433	-	89	37.247	ENSIPUG00000014946	lsm14b	62	40.613	Ictalurus_punctatus
ENSCVAG00000012433	-	88	36.820	ENSSTOG00000020482	LSM14B	95	32.313	Ictidomys_tridecemlineatus
ENSCVAG00000012433	-	88	36.820	ENSJJAG00000012728	Lsm14b	95	32.542	Jaculus_jaculus
ENSCVAG00000012433	-	89	37.238	ENSKMAG00000017524	lsm14b	64	38.153	Kryptolebias_marmoratus
ENSCVAG00000012433	-	71	44.019	ENSKMAG00000012834	-	61	60.544	Kryptolebias_marmoratus
ENSCVAG00000012433	-	97	53.110	ENSLBEG00000007951	LSM14B	94	53.110	Labrus_bergylta
ENSCVAG00000012433	-	89	32.979	ENSLACG00000003849	LSM14B	69	34.448	Latimeria_chalumnae
ENSCVAG00000012433	-	89	46.094	ENSLOCG00000003746	lsm14b	71	39.080	Lepisosteus_oculatus
ENSCVAG00000012433	-	88	37.657	ENSLAFG00000007492	LSM14B	73	38.281	Loxodonta_africana
ENSCVAG00000012433	-	88	36.402	ENSMFAG00000041479	LSM14B	65	37.255	Macaca_fascicularis
ENSCVAG00000012433	-	88	36.402	ENSMMUG00000014084	LSM14B	65	37.255	Macaca_mulatta
ENSCVAG00000012433	-	88	36.402	ENSMNEG00000045573	LSM14B	65	37.255	Macaca_nemestrina
ENSCVAG00000012433	-	88	37.657	ENSMLEG00000040895	LSM14B	73	37.647	Mandrillus_leucophaeus
ENSCVAG00000012433	-	97	47.471	ENSMAMG00000024124	LSM14B	66	47.471	Mastacembelus_armatus
ENSCVAG00000012433	-	86	33.043	ENSMAMG00000020539	lsm14b	65	35.887	Mastacembelus_armatus
ENSCVAG00000012433	-	89	35.443	ENSMZEG00005000987	lsm14b	63	37.805	Maylandia_zebra
ENSCVAG00000012433	-	83	62.500	ENSMZEG00005026001	LSM14B	69	48.315	Maylandia_zebra
ENSCVAG00000012433	-	88	36.214	ENSMGAG00000005300	LSM14B	72	38.462	Meleagris_gallopavo
ENSCVAG00000012433	-	88	36.402	ENSMAUG00000020700	Lsm14b	95	31.973	Mesocricetus_auratus
ENSCVAG00000012433	-	88	36.820	ENSMICG00000014675	LSM14B	65	37.891	Microcebus_murinus
ENSCVAG00000012433	-	88	33.891	ENSMOCG00000020600	Lsm14b	65	35.938	Microtus_ochrogaster
ENSCVAG00000012433	-	89	38.367	ENSMMOG00000020042	lsm14b	67	39.382	Mola_mola
ENSCVAG00000012433	-	88	50.909	ENSMMOG00000017321	LSM14B	63	53.165	Mola_mola
ENSCVAG00000012433	-	88	32.130	ENSMODG00000016690	LSM14B	95	34.014	Monodelphis_domestica
ENSCVAG00000012433	-	95	38.053	ENSMALG00000004783	lsm14b	63	38.938	Monopterus_albus
ENSCVAG00000012433	-	88	46.721	ENSMALG00000022251	LSM14B	66	46.947	Monopterus_albus
ENSCVAG00000012433	-	88	36.820	MGP_CAROLIEiJ_G0024770	Lsm14b	65	37.109	Mus_caroli
ENSCVAG00000012433	-	88	36.820	ENSMUSG00000039108	Lsm14b	95	32.313	Mus_musculus
ENSCVAG00000012433	-	88	36.402	MGP_PahariEiJ_G0026214	Lsm14b	65	36.719	Mus_pahari
ENSCVAG00000012433	-	88	36.820	MGP_SPRETEiJ_G0025693	Lsm14b	65	37.109	Mus_spretus
ENSCVAG00000012433	-	88	32.014	ENSMPUG00000007584	LSM14B	72	33.333	Mustela_putorius_furo
ENSCVAG00000012433	-	89	36.777	ENSMLUG00000000304	LSM14B	66	37.354	Myotis_lucifugus
ENSCVAG00000012433	-	52	47.059	ENSNGAG00000016550	Lsm14b	64	45.098	Nannospalax_galili
ENSCVAG00000012433	-	88	37.657	ENSNLEG00000015757	LSM14B	73	37.647	Nomascus_leucogenys
ENSCVAG00000012433	-	88	35.983	ENSODEG00000004099	LSM14B	95	32.203	Octodon_degus
ENSCVAG00000012433	-	86	32.773	ENSONIG00000020318	lsm14b	65	35.714	Oreochromis_niloticus
ENSCVAG00000012433	-	56	40.602	ENSOANG00000003370	LSM14B	53	40.602	Ornithorhynchus_anatinus
ENSCVAG00000012433	-	88	34.979	ENSOCUG00000006279	LSM14B	73	37.255	Oryctolagus_cuniculus
ENSCVAG00000012433	-	91	45.306	ENSORLG00000028353	LSM14B	66	45.136	Oryzias_latipes
ENSCVAG00000012433	-	89	34.959	ENSORLG00000013525	lsm14b	62	37.037	Oryzias_latipes
ENSCVAG00000012433	-	91	47.034	ENSORLG00020018191	-	93	47.177	Oryzias_latipes_hni
ENSCVAG00000012433	-	89	34.959	ENSORLG00020020553	lsm14b	62	37.037	Oryzias_latipes_hni
ENSCVAG00000012433	-	89	37.131	ENSORLG00015016862	lsm14b	62	37.037	Oryzias_latipes_hsok
ENSCVAG00000012433	-	91	46.122	ENSORLG00015013157	LSM14B	66	45.914	Oryzias_latipes_hsok
ENSCVAG00000012433	-	89	33.898	ENSOMEG00000023917	lsm14b	62	35.537	Oryzias_melastigma
ENSCVAG00000012433	-	93	53.000	ENSOMEG00000000171	-	89	54.000	Oryzias_melastigma
ENSCVAG00000012433	-	88	31.295	ENSOGAG00000003915	LSM14B	68	32.542	Otolemur_garnettii
ENSCVAG00000012433	-	88	31.295	ENSOARG00000014706	LSM14B	74	32.881	Ovis_aries
ENSCVAG00000012433	-	88	36.402	ENSPPAG00000035799	LSM14B	68	37.255	Pan_paniscus
ENSCVAG00000012433	-	88	36.402	ENSPPRG00000009197	LSM14B	65	37.891	Panthera_pardus
ENSCVAG00000012433	-	88	40.376	ENSPTIG00000021518	LSM14B	97	41.304	Panthera_tigris_altaica
ENSCVAG00000012433	-	88	36.402	ENSPTRG00000013696	LSM14B	65	37.255	Pan_troglodytes
ENSCVAG00000012433	-	88	36.402	ENSPANG00000011747	LSM14B	65	37.255	Papio_anubis
ENSCVAG00000012433	-	89	38.793	ENSPKIG00000003275	lsm14b	64	40.650	Paramormyrops_kingsleyae
ENSCVAG00000012433	-	88	37.500	ENSPSIG00000014762	LSM14B	95	34.354	Pelodiscus_sinensis
ENSCVAG00000012433	-	88	37.238	ENSPEMG00000017688	Lsm14b	95	32.993	Peromyscus_maniculatus_bairdii
ENSCVAG00000012433	-	88	37.395	ENSPCIG00000013405	LSM14B	65	38.824	Phascolarctos_cinereus
ENSCVAG00000012433	-	95	35.060	ENSPFOG00000005631	lsm14b	66	33.725	Poecilia_formosa
ENSCVAG00000012433	-	86	52.361	ENSPLAG00000005793	LSM14B	65	54.331	Poecilia_latipinna
ENSCVAG00000012433	-	95	34.387	ENSPLAG00000002449	lsm14b	64	34.387	Poecilia_latipinna
ENSCVAG00000012433	-	88	34.177	ENSPMEG00000000745	lsm14b	64	35.060	Poecilia_mexicana
ENSCVAG00000012433	-	85	52.174	ENSPMEG00000022953	LSM14B	65	54.331	Poecilia_mexicana
ENSCVAG00000012433	-	90	58.929	ENSPREG00000007828	LSM14B	94	60.084	Poecilia_reticulata
ENSCVAG00000012433	-	88	34.310	ENSPPYG00000011194	LSM14B	65	36.471	Pongo_abelii
ENSCVAG00000012433	-	88	36.820	ENSPCOG00000013625	LSM14B	65	37.891	Propithecus_coquereli
ENSCVAG00000012433	-	89	34.583	ENSPVAG00000017918	LSM14B	82	35.433	Pteropus_vampyrus
ENSCVAG00000012433	-	89	40.930	ENSPNAG00000012777	lsm14b	62	44.105	Pygocentrus_nattereri
ENSCVAG00000012433	-	88	31.295	ENSRNOG00000054557	Lsm14b	68	31.973	Rattus_norvegicus
ENSCVAG00000012433	-	88	36.820	ENSRBIG00000033461	LSM14B	73	37.500	Rhinopithecus_bieti
ENSCVAG00000012433	-	88	36.402	ENSRROG00000042949	LSM14B	95	32.313	Rhinopithecus_roxellana
ENSCVAG00000012433	-	88	35.983	ENSSBOG00000032820	LSM14B	73	36.719	Saimiri_boliviensis_boliviensis
ENSCVAG00000012433	-	88	37.238	ENSSHAG00000015528	LSM14B	95	33.559	Sarcophilus_harrisii
ENSCVAG00000012433	-	89	37.083	ENSSFOG00015004627	lsm14b	67	40.157	Scleropages_formosus
ENSCVAG00000012433	-	89	38.075	ENSSMAG00000012725	lsm14b	64	38.710	Scophthalmus_maximus
ENSCVAG00000012433	-	97	49.434	ENSSMAG00000000135	LSM14B	67	48.302	Scophthalmus_maximus
ENSCVAG00000012433	-	89	38.494	ENSSDUG00000020977	lsm14b	64	39.113	Seriola_dumerili
ENSCVAG00000012433	-	90	48.996	ENSSDUG00000022770	LSM14B	67	45.627	Seriola_dumerili
ENSCVAG00000012433	-	90	48.810	ENSSLDG00000011354	-	96	49.259	Seriola_lalandi_dorsalis
ENSCVAG00000012433	-	67	38.462	ENSSARG00000007749	-	73	38.462	Sorex_araneus
ENSCVAG00000012433	-	88	31.295	ENSSPUG00000014360	LSM14B	69	33.220	Sphenodon_punctatus
ENSCVAG00000012433	-	97	47.012	ENSSPAG00000018854	-	95	47.012	Stegastes_partitus
ENSCVAG00000012433	-	89	40.553	ENSSPAG00000020915	lsm14b	60	42.152	Stegastes_partitus
ENSCVAG00000012433	-	88	35.714	ENSSSCG00000026052	LSM14B	95	31.973	Sus_scrofa
ENSCVAG00000012433	-	88	36.364	ENSTGUG00000007884	LSM14B	73	38.224	Taeniopygia_guttata
ENSCVAG00000012433	-	88	44.351	ENSTRUG00000001529	LSM14B	64	45.850	Takifugu_rubripes
ENSCVAG00000012433	-	95	37.652	ENSTRUG00000011354	lsm14b	64	37.652	Takifugu_rubripes
ENSCVAG00000012433	-	88	38.298	ENSTNIG00000002445	lsm14b	65	39.286	Tetraodon_nigroviridis
ENSCVAG00000012433	-	55	43.200	ENSTTRG00000011043	LSM14B	65	36.471	Tursiops_truncatus
ENSCVAG00000012433	-	88	36.402	ENSUAMG00000025298	LSM14B	66	37.891	Ursus_americanus
ENSCVAG00000012433	-	88	36.402	ENSUMAG00000000480	LSM14B	66	37.891	Ursus_maritimus
ENSCVAG00000012433	-	88	36.820	ENSVVUG00000015920	LSM14B	94	35.448	Vulpes_vulpes
ENSCVAG00000012433	-	73	31.579	ENSXETG00000001997	lsm14b	63	32.057	Xenopus_tropicalis
ENSCVAG00000012433	-	89	34.583	ENSXMAG00000010013	lsm14b	64	35.317	Xiphophorus_maculatus