EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000012483 (Gene tree)
Gene ID: 107088140
Gene Symbol: -
Alias: -
Full Name: ataxin-1-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 20397 bases
Position: chrKL652708.1:842170-862566
Accession: 107088140
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000010372	AXH	PF08517.12	1.6e-36	1	1
ENSCVAP00000010376	AXH	PF08517.12	1.6e-36	1	1
ENSCVAP00000026722	AXH	PF08517.12	1.6e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000017059	-	4565	-	ENSCVAP00000010376	667 (aa)	-	UPI000742671A
ENSCVAT00000017048	-	4709	XM_015380108	ENSCVAP00000010372	667 (aa)	XP_015235594	UPI000742671A
ENSCVAT00000017055	-	4976	XM_015380107	ENSCVAP00000026722	667 (aa)	XP_015235593	UPI000742671A

Gene Model

Click here to download ENSCVAG00000012483's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000012483's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000012483	-	100	74.344	ENSAPOG00000010154	-	100	75.219	Acanthochromis_polyacanthus
ENSCVAG00000012483	-	100	74.599	ENSAOCG00000006788	-	100	75.073	Amphiprion_ocellaris
ENSCVAG00000012483	-	100	74.161	ENSAPEG00000013961	-	100	74.636	Amphiprion_percula
ENSCVAG00000012483	-	100	69.030	ENSATEG00000015767	-	100	69.754	Anabas_testudineus
ENSCVAG00000012483	-	100	43.290	ENSAMXG00000002724	-	100	45.029	Astyanax_mexicanus
ENSCVAG00000012483	-	100	62.281	ENSCSEG00000020655	-	100	63.848	Cynoglossus_semilaevis
ENSCVAG00000012483	-	100	83.578	ENSFHEG00000003223	-	100	83.724	Fundulus_heteroclitus
ENSCVAG00000012483	-	100	81.765	ENSGAFG00000013774	-	100	81.912	Gambusia_affinis
ENSCVAG00000012483	-	100	67.595	ENSHBUG00000007567	-	100	70.640	Haplochromis_burtoni
ENSCVAG00000012483	-	100	60.296	ENSHCOG00000000585	-	100	59.584	Hippocampus_comes
ENSCVAG00000012483	-	100	40.000	ENSIPUG00000014628	-	100	39.448	Ictalurus_punctatus
ENSCVAG00000012483	-	100	74.446	ENSKMAG00000013261	-	100	74.633	Kryptolebias_marmoratus
ENSCVAG00000012483	-	77	69.540	ENSLBEG00000007715	-	100	69.732	Labrus_bergylta
ENSCVAG00000012483	-	88	49.372	ENSLOCG00000003546	-	93	48.954	Lepisosteus_oculatus
ENSCVAG00000012483	-	100	68.543	ENSMAMG00000024117	-	100	70.349	Mastacembelus_armatus
ENSCVAG00000012483	-	100	67.595	ENSMZEG00005025990	-	100	70.640	Maylandia_zebra
ENSCVAG00000012483	-	100	68.750	ENSMALG00000022211	-	100	69.477	Monopterus_albus
ENSCVAG00000012483	-	100	65.982	ENSORLG00000025783	-	100	66.716	Oryzias_latipes
ENSCVAG00000012483	-	100	65.396	ENSORLG00020018594	-	100	66.129	Oryzias_latipes_hni
ENSCVAG00000012483	-	100	65.000	ENSORLG00015013642	-	100	65.735	Oryzias_latipes_hsok
ENSCVAG00000012483	-	100	67.009	ENSOMEG00000007446	-	100	67.302	Oryzias_melastigma
ENSCVAG00000012483	-	84	38.514	ENSPKIG00000025441	-	97	35.704	Paramormyrops_kingsleyae
ENSCVAG00000012483	-	100	81.525	ENSPFOG00000009556	-	100	81.818	Poecilia_formosa
ENSCVAG00000012483	-	73	82.041	ENSPLAG00000020125	-	100	82.245	Poecilia_latipinna
ENSCVAG00000012483	-	100	81.525	ENSPMEG00000023122	-	100	81.818	Poecilia_mexicana
ENSCVAG00000012483	-	100	81.029	ENSPREG00000007919	-	100	81.818	Poecilia_reticulata
ENSCVAG00000012483	-	100	43.149	ENSPNAG00000001615	-	100	44.118	Pygocentrus_nattereri
ENSCVAG00000012483	-	84	39.353	ENSSFOG00015020613	-	84	39.028	Scleropages_formosus
ENSCVAG00000012483	-	88	72.259	ENSSDUG00000022785	-	98	72.757	Seriola_dumerili
ENSCVAG00000012483	-	100	71.657	ENSSLDG00000012498	-	100	72.093	Seriola_lalandi_dorsalis
ENSCVAG00000012483	-	100	73.913	ENSSPAG00000018983	-	100	74.783	Stegastes_partitus
ENSCVAG00000012483	-	100	82.769	ENSXMAG00000028965	-	100	82.916	Xiphophorus_maculatus