EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000012504 (Gene tree)
Gene ID: -
Gene Symbol: slirp
Alias: sb:cb657|si:ch73-276n11.1
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 1539 bases
Position: chrKL652743.1:970559-972097
Accession: 107089198
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000010379	RRM_1	PF00076.22	3.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000017057	-	306	XM_015381846	ENSCVAP00000010379	101 (aa)	XP_015237332	-

Gene Model

Click here to download ENSCVAG00000012504's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000012504's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000012504	slirp	75	61.842	ENSG00000119705	SLIRP	88	65.672	Homo_sapiens
ENSCVAG00000012504	slirp	86	76.667	ENSAPOG00000001298	slirp	90	76.667	Acanthochromis_polyacanthus
ENSCVAG00000012504	slirp	68	62.319	ENSAMEG00000003975	SLIRP	76	62.319	Ailuropoda_melanoleuca
ENSCVAG00000012504	slirp	77	84.615	ENSACIG00000023083	slirp	77	84.615	Amphilophus_citrinellus
ENSCVAG00000012504	slirp	84	76.136	ENSAOCG00000006342	slirp	89	76.136	Amphiprion_ocellaris
ENSCVAG00000012504	slirp	84	76.136	ENSAPEG00000015719	-	90	76.136	Amphiprion_percula
ENSCVAG00000012504	slirp	84	76.136	ENSAPEG00000015917	slirp	89	76.136	Amphiprion_percula
ENSCVAG00000012504	slirp	86	75.556	ENSATEG00000013525	slirp	90	75.556	Anabas_testudineus
ENSCVAG00000012504	slirp	85	62.921	ENSAMXG00000018693	slirp	89	62.921	Astyanax_mexicanus
ENSCVAG00000012504	slirp	68	60.870	ENSCJAG00000016946	SLIRP	72	62.687	Callithrix_jacchus
ENSCVAG00000012504	slirp	71	59.722	ENSCAFG00020015876	-	65	59.722	Canis_lupus_dingo
ENSCVAG00000012504	slirp	68	60.870	ENSCCAG00000030130	SLIRP	63	60.870	Cebus_capucinus
ENSCVAG00000012504	slirp	70	64.789	ENSCATG00000036327	SLIRP	72	65.672	Cercocebus_atys
ENSCVAG00000012504	slirp	68	65.217	ENSCSAG00000011736	SLIRP	63	65.217	Chlorocebus_sabaeus
ENSCVAG00000012504	slirp	79	65.000	ENSCPBG00000026327	SLIRP	81	65.000	Chrysemys_picta_bellii
ENSCVAG00000012504	slirp	66	65.672	ENSCANG00000032892	SLIRP	68	65.672	Colobus_angolensis_palliatus
ENSCVAG00000012504	slirp	69	58.571	ENSCGRG00001024068	Slirp	63	58.571	Cricetulus_griseus_chok1gshd
ENSCVAG00000012504	slirp	69	58.571	ENSCGRG00000017440	Slirp	63	58.571	Cricetulus_griseus_crigri
ENSCVAG00000012504	slirp	100	53.922	ENSCSEG00000015766	slirp	98	53.922	Cynoglossus_semilaevis
ENSCVAG00000012504	slirp	82	77.907	ENSDARG00000097753	slirp	86	77.528	Danio_rerio
ENSCVAG00000012504	slirp	76	49.351	ENSDNOG00000007721	SLIRP	70	49.351	Dasypus_novemcinctus
ENSCVAG00000012504	slirp	80	46.914	ENSDORG00000012379	Slirp	73	46.914	Dipodomys_ordii
ENSCVAG00000012504	slirp	69	51.429	ENSETEG00000010345	SLIRP	65	51.429	Echinops_telfairi
ENSCVAG00000012504	slirp	68	56.522	ENSEASG00005020193	SLIRP	62	56.522	Equus_asinus_asinus
ENSCVAG00000012504	slirp	68	56.522	ENSEEUG00000007257	SLIRP	68	56.522	Erinaceus_europaeus
ENSCVAG00000012504	slirp	86	67.778	ENSELUG00000016800	slirp	89	67.778	Esox_lucius
ENSCVAG00000012504	slirp	76	54.545	ENSFCAG00000036326	SLIRP	79	54.545	Felis_catus
ENSCVAG00000012504	slirp	75	60.526	ENSFALG00000012583	SLIRP	72	60.526	Ficedula_albicollis
ENSCVAG00000012504	slirp	76	52.500	ENSFDAG00000008347	SLIRP	71	52.500	Fukomys_damarensis
ENSCVAG00000012504	slirp	58	84.746	ENSFHEG00000004709	slirp	64	84.746	Fundulus_heteroclitus
ENSCVAG00000012504	slirp	78	77.215	ENSGMOG00000016948	slirp	76	77.215	Gadus_morhua
ENSCVAG00000012504	slirp	77	58.974	ENSGALG00000031238	SLIRP	78	60.811	Gallus_gallus
ENSCVAG00000012504	slirp	78	87.342	ENSGAFG00000010998	slirp	79	87.342	Gambusia_affinis
ENSCVAG00000012504	slirp	78	87.342	ENSGACG00000020137	slirp	92	87.342	Gasterosteus_aculeatus
ENSCVAG00000012504	slirp	80	67.901	ENSGAGG00000009953	SLIRP	56	67.901	Gopherus_agassizii
ENSCVAG00000012504	slirp	69	64.286	ENSGGOG00000011059	-	73	64.706	Gorilla_gorilla
ENSCVAG00000012504	slirp	68	53.623	ENSHGLG00000018491	SLIRP	62	53.623	Heterocephalus_glaber_female
ENSCVAG00000012504	slirp	68	53.623	ENSHGLG00100014153	SLIRP	62	53.623	Heterocephalus_glaber_male
ENSCVAG00000012504	slirp	79	83.750	ENSHCOG00000006795	slirp	81	83.750	Hippocampus_comes
ENSCVAG00000012504	slirp	86	72.222	ENSIPUG00000010214	SLIRP	90	72.222	Ictalurus_punctatus
ENSCVAG00000012504	slirp	68	57.971	ENSSTOG00000034316	SLIRP	62	57.971	Ictidomys_tridecemlineatus
ENSCVAG00000012504	slirp	83	69.412	ENSKMAG00000002038	slirp	82	69.412	Kryptolebias_marmoratus
ENSCVAG00000012504	slirp	79	70.000	ENSLBEG00000007564	slirp	80	70.000	Labrus_bergylta
ENSCVAG00000012504	slirp	86	76.667	ENSLACG00000013434	SLIRP	87	76.667	Latimeria_chalumnae
ENSCVAG00000012504	slirp	68	65.217	ENSMFAG00000042960	SLIRP	72	65.672	Macaca_fascicularis
ENSCVAG00000012504	slirp	68	65.217	ENSMMUG00000029256	SLIRP	72	65.672	Macaca_mulatta
ENSCVAG00000012504	slirp	68	65.217	ENSMNEG00000028921	SLIRP	72	65.672	Macaca_nemestrina
ENSCVAG00000012504	slirp	67	64.706	ENSMLEG00000043644	SLIRP	68	65.672	Mandrillus_leucophaeus
ENSCVAG00000012504	slirp	84	80.682	ENSMZEG00005004617	slirp	89	80.682	Maylandia_zebra
ENSCVAG00000012504	slirp	67	58.824	ENSMAUG00000003857	Slirp	61	58.824	Mesocricetus_auratus
ENSCVAG00000012504	slirp	76	62.338	ENSMICG00000012080	SLIRP	72	62.338	Microcebus_murinus
ENSCVAG00000012504	slirp	68	59.420	ENSMOCG00000016019	Slirp	68	59.420	Microtus_ochrogaster
ENSCVAG00000012504	slirp	79	82.500	ENSMMOG00000018268	slirp	80	82.500	Mola_mola
ENSCVAG00000012504	slirp	68	59.420	ENSMODG00000005207	-	97	59.420	Monodelphis_domestica
ENSCVAG00000012504	slirp	86	73.333	ENSMALG00000012581	slirp	92	73.333	Monopterus_albus
ENSCVAG00000012504	slirp	80	54.321	MGP_CAROLIEiJ_G0017995	Slirp	75	54.321	Mus_caroli
ENSCVAG00000012504	slirp	80	54.321	ENSMUSG00000021040	Slirp	70	62.319	Mus_musculus
ENSCVAG00000012504	slirp	80	54.321	MGP_SPRETEiJ_G0018840	Slirp	72	54.321	Mus_spretus
ENSCVAG00000012504	slirp	86	48.889	ENSMLUG00000029544	-	79	48.889	Myotis_lucifugus
ENSCVAG00000012504	slirp	67	55.882	ENSMLUG00000024998	-	61	55.882	Myotis_lucifugus
ENSCVAG00000012504	slirp	68	50.725	ENSNGAG00000016363	Slirp	66	50.725	Nannospalax_galili
ENSCVAG00000012504	slirp	69	57.143	ENSNLEG00000032459	-	73	58.824	Nomascus_leucogenys
ENSCVAG00000012504	slirp	69	57.143	ENSNLEG00000027238	-	80	57.143	Nomascus_leucogenys
ENSCVAG00000012504	slirp	68	62.319	ENSODEG00000012580	SLIRP	75	62.319	Octodon_degus
ENSCVAG00000012504	slirp	84	80.682	ENSONIG00000011692	slirp	89	80.682	Oreochromis_niloticus
ENSCVAG00000012504	slirp	68	66.667	ENSOANG00000022366	SLIRP	62	66.667	Ornithorhynchus_anatinus
ENSCVAG00000012504	slirp	86	74.444	ENSORLG00000010761	slirp	70	74.444	Oryzias_latipes
ENSCVAG00000012504	slirp	86	73.333	ENSORLG00020022188	slirp	90	73.333	Oryzias_latipes_hni
ENSCVAG00000012504	slirp	85	73.034	ENSORLG00015020171	slirp	88	73.034	Oryzias_latipes_hsok
ENSCVAG00000012504	slirp	86	76.667	ENSOMEG00000019321	slirp	90	76.667	Oryzias_melastigma
ENSCVAG00000012504	slirp	69	64.286	ENSPPAG00000040710	-	73	64.706	Pan_paniscus
ENSCVAG00000012504	slirp	76	54.545	ENSPPRG00000014350	SLIRP	79	54.545	Panthera_pardus
ENSCVAG00000012504	slirp	76	54.545	ENSPTIG00000014196	SLIRP	79	54.545	Panthera_tigris_altaica
ENSCVAG00000012504	slirp	68	65.217	ENSPTRG00000030691	SLIRP	73	64.706	Pan_troglodytes
ENSCVAG00000012504	slirp	68	66.667	ENSPANG00000026323	SLIRP	72	67.164	Papio_anubis
ENSCVAG00000012504	slirp	59	71.667	ENSPKIG00000008831	slirp	59	71.667	Paramormyrops_kingsleyae
ENSCVAG00000012504	slirp	78	84.810	ENSPMGG00000010541	slirp	91	84.810	Periophthalmus_magnuspinnatus
ENSCVAG00000012504	slirp	69	58.571	ENSPEMG00000013234	Slirp	68	59.420	Peromyscus_maniculatus_bairdii
ENSCVAG00000012504	slirp	81	47.561	ENSPMAG00000009355	slirp	91	47.561	Petromyzon_marinus
ENSCVAG00000012504	slirp	79	52.500	ENSPCIG00000026842	-	86	52.500	Phascolarctos_cinereus
ENSCVAG00000012504	slirp	86	80.000	ENSPFOG00000006758	slirp	90	80.000	Poecilia_formosa
ENSCVAG00000012504	slirp	78	87.342	ENSPLAG00000011140	slirp	79	87.342	Poecilia_latipinna
ENSCVAG00000012504	slirp	86	80.000	ENSPMEG00000019535	slirp	90	80.000	Poecilia_mexicana
ENSCVAG00000012504	slirp	78	87.342	ENSPREG00000011673	slirp	79	87.342	Poecilia_reticulata
ENSCVAG00000012504	slirp	68	65.217	ENSPPYG00000006030	SLIRP	64	64.286	Pongo_abelii
ENSCVAG00000012504	slirp	68	63.768	ENSPCOG00000015159	SLIRP	86	43.529	Propithecus_coquereli
ENSCVAG00000012504	slirp	86	75.556	ENSPNAG00000008633	slirp	91	75.556	Pygocentrus_nattereri
ENSCVAG00000012504	slirp	68	59.420	ENSRBIG00000035817	-	63	59.420	Rhinopithecus_bieti
ENSCVAG00000012504	slirp	64	67.692	ENSRBIG00000031396	-	65	67.692	Rhinopithecus_bieti
ENSCVAG00000012504	slirp	68	66.667	ENSRBIG00000032222	-	72	67.164	Rhinopithecus_bieti
ENSCVAG00000012504	slirp	66	65.672	ENSRBIG00000032998	-	62	65.672	Rhinopithecus_bieti
ENSCVAG00000012504	slirp	78	62.025	ENSRROG00000041312	-	78	62.025	Rhinopithecus_roxellana
ENSCVAG00000012504	slirp	68	66.667	ENSRROG00000036656	-	72	67.164	Rhinopithecus_roxellana
ENSCVAG00000012504	slirp	66	67.164	ENSRROG00000017133	-	70	67.164	Rhinopithecus_roxellana
ENSCVAG00000012504	slirp	64	66.154	ENSRROG00000035604	-	65	66.154	Rhinopithecus_roxellana
ENSCVAG00000012504	slirp	76	57.143	ENSSBOG00000020014	SLIRP	73	63.235	Saimiri_boliviensis_boliviensis
ENSCVAG00000012504	slirp	79	68.750	ENSSFOG00015011165	slirp	81	68.750	Scleropages_formosus
ENSCVAG00000012504	slirp	78	59.494	ENSSMAG00000012930	slirp	77	59.494	Scophthalmus_maximus
ENSCVAG00000012504	slirp	86	77.778	ENSSDUG00000021883	slirp	59	77.778	Seriola_dumerili
ENSCVAG00000012504	slirp	86	77.778	ENSSLDG00000023136	slirp	82	77.778	Seriola_lalandi_dorsalis
ENSCVAG00000012504	slirp	74	68.000	ENSSPUG00000009346	SLIRP	77	68.000	Sphenodon_punctatus
ENSCVAG00000012504	slirp	86	67.778	ENSSPAG00000013477	slirp	90	67.778	Stegastes_partitus
ENSCVAG00000012504	slirp	80	49.383	ENSSSCG00000028167	SLIRP	73	49.383	Sus_scrofa
ENSCVAG00000012504	slirp	74	58.667	ENSTGUG00000012337	SLIRP	71	58.667	Taeniopygia_guttata
ENSCVAG00000012504	slirp	86	68.132	ENSTRUG00000020127	slirp	90	68.132	Takifugu_rubripes
ENSCVAG00000012504	slirp	68	57.971	ENSUAMG00000022445	SLIRP	62	57.971	Ursus_americanus
ENSCVAG00000012504	slirp	68	57.971	ENSUMAG00000007166	SLIRP	62	57.971	Ursus_maritimus
ENSCVAG00000012504	slirp	69	52.857	ENSVPAG00000001781	SLIRP	65	52.857	Vicugna_pacos
ENSCVAG00000012504	slirp	67	61.765	ENSVVUG00000004436	SLIRP	73	53.086	Vulpes_vulpes
ENSCVAG00000012504	slirp	79	75.000	ENSXETG00000030343	SLIRP	90	75.000	Xenopus_tropicalis
ENSCVAG00000012504	slirp	86	80.000	ENSXCOG00000009422	slirp	90	80.000	Xiphophorus_couchianus
ENSCVAG00000012504	slirp	78	88.608	ENSXMAG00000015655	slirp	79	88.608	Xiphophorus_maculatus