EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000012526 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 9194 bases
Position: chrKL652621.1:318843-328036
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000026727	zf-CCHC	PF00098.23	2.4e-07	1	1
ENSCVAP00000026727	PAP_assoc	PF03828.19	4.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000029536	-	2085	-	ENSCVAP00000026727	694 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000012526's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000012526's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000012526	-	69	62.971	ENSCVAG00000012659	TUT4	61	57.246

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000012526	-	70	61.394	ENSG00000083223	TUT7	95	51.932	Homo_sapiens
ENSCVAG00000012526	-	98	73.707	ENSAPOG00000012979	TUT7	94	72.989	Acanthochromis_polyacanthus
ENSCVAG00000012526	-	72	60.773	ENSAMEG00000004148	TUT7	62	60.478	Ailuropoda_melanoleuca
ENSCVAG00000012526	-	81	67.959	ENSAOCG00000004223	-	79	67.183	Amphiprion_ocellaris
ENSCVAG00000012526	-	52	61.157	ENSAPEG00000014922	-	92	61.157	Amphiprion_percula
ENSCVAG00000012526	-	71	62.664	ENSAPLG00000015510	TUT7	61	62.664	Anas_platyrhynchos
ENSCVAG00000012526	-	81	52.397	ENSACAG00000000279	TUT7	81	63.938	Anolis_carolinensis
ENSCVAG00000012526	-	72	61.142	ENSANAG00000025848	TUT7	95	52.427	Aotus_nancymaae
ENSCVAG00000012526	-	98	71.389	ENSACLG00000018198	TUT7	93	70.851	Astatotilapia_calliptera
ENSCVAG00000012526	-	72	60.926	ENSBTAG00000001737	TUT7	64	61.224	Bos_taurus
ENSCVAG00000012526	-	71	61.682	ENSCJAG00000001845	TUT7	95	52.427	Callithrix_jacchus
ENSCVAG00000012526	-	81	56.792	ENSCAFG00000001331	TUT7	66	57.119	Canis_familiaris
ENSCVAG00000012526	-	81	56.792	ENSCAFG00020023620	TUT7	94	49.272	Canis_lupus_dingo
ENSCVAG00000012526	-	80	56.137	ENSCHIG00000017690	TUT7	70	56.301	Capra_hircus
ENSCVAG00000012526	-	72	60.221	ENSTSYG00000008907	TUT7	99	51.799	Carlito_syrichta
ENSCVAG00000012526	-	72	60.000	ENSCPOG00000002500	TUT7	61	60.000	Cavia_porcellus
ENSCVAG00000012526	-	72	61.029	ENSCATG00000032888	TUT7	95	52.670	Cercocebus_atys
ENSCVAG00000012526	-	72	59.273	ENSCLAG00000007535	TUT7	62	59.781	Chinchilla_lanigera
ENSCVAG00000012526	-	71	61.266	ENSCSAG00000007408	TUT7	65	60.958	Chlorocebus_sabaeus
ENSCVAG00000012526	-	57	67.750	ENSCHOG00000011129	TUT7	50	67.750	Choloepus_hoffmanni
ENSCVAG00000012526	-	71	63.910	ENSCPBG00000005272	TUT7	58	62.825	Chrysemys_picta_bellii
ENSCVAG00000012526	-	71	61.266	ENSCANG00000035790	TUT7	95	52.670	Colobus_angolensis_palliatus
ENSCVAG00000012526	-	84	56.250	ENSCGRG00001020605	-	67	56.656	Cricetulus_griseus_chok1gshd
ENSCVAG00000012526	-	73	60.474	ENSCGRG00000016585	-	61	60.108	Cricetulus_griseus_crigri
ENSCVAG00000012526	-	98	67.529	ENSCSEG00000007068	TUT7	95	67.098	Cynoglossus_semilaevis
ENSCVAG00000012526	-	81	44.149	ENSDARG00000074645	CABZ01032476.1	80	45.144	Danio_rerio
ENSCVAG00000012526	-	98	50.471	ENSDNOG00000010663	TUT7	76	50.539	Dasypus_novemcinctus
ENSCVAG00000012526	-	71	60.935	ENSDORG00000009046	-	92	52.750	Dipodomys_ordii
ENSCVAG00000012526	-	72	61.326	ENSEASG00005020165	TUT7	65	56.908	Equus_asinus_asinus
ENSCVAG00000012526	-	72	61.326	ENSECAG00000014831	TUT7	66	56.908	Equus_caballus
ENSCVAG00000012526	-	72	48.148	ENSEEUG00000012794	TUT7	57	48.052	Erinaceus_europaeus
ENSCVAG00000012526	-	98	57.114	ENSELUG00000013049	-	90	56.376	Esox_lucius
ENSCVAG00000012526	-	72	61.029	ENSFCAG00000003491	TUT7	95	52.998	Felis_catus
ENSCVAG00000012526	-	78	58.814	ENSFALG00000003541	TUT7	64	58.814	Ficedula_albicollis
ENSCVAG00000012526	-	72	59.743	ENSFDAG00000002315	TUT7	60	60.294	Fukomys_damarensis
ENSCVAG00000012526	-	99	79.126	ENSFHEG00000004770	-	99	78.420	Fundulus_heteroclitus
ENSCVAG00000012526	-	78	70.295	ENSGMOG00000001464	-	77	70.881	Gadus_morhua
ENSCVAG00000012526	-	78	59.831	ENSGALG00000012607	ZCCHC6	62	59.831	Gallus_gallus
ENSCVAG00000012526	-	85	75.085	ENSGAFG00000017141	-	75	73.720	Gambusia_affinis
ENSCVAG00000012526	-	88	71.994	ENSGACG00000004735	TUT7	97	70.794	Gasterosteus_aculeatus
ENSCVAG00000012526	-	71	60.714	ENSGAGG00000013087	TUT7	59	60.714	Gopherus_agassizii
ENSCVAG00000012526	-	71	61.266	ENSGGOG00000007523	ZCCHC6	95	52.174	Gorilla_gorilla
ENSCVAG00000012526	-	51	66.111	ENSHBUG00000011514	-	96	66.111	Haplochromis_burtoni
ENSCVAG00000012526	-	73	59.636	ENSHGLG00000018427	TUT7	63	59.818	Heterocephalus_glaber_female
ENSCVAG00000012526	-	73	59.636	ENSHGLG00100004701	TUT7	63	59.818	Heterocephalus_glaber_male
ENSCVAG00000012526	-	52	65.479	ENSHCOG00000006100	-	98	65.479	Hippocampus_comes
ENSCVAG00000012526	-	72	59.669	ENSSTOG00000000586	TUT7	62	59.853	Ictidomys_tridecemlineatus
ENSCVAG00000012526	-	83	56.169	ENSJJAG00000000106	-	94	52.868	Jaculus_jaculus
ENSCVAG00000012526	-	50	68.325	ENSKMAG00000005782	-	94	68.325	Kryptolebias_marmoratus
ENSCVAG00000012526	-	82	67.225	ENSLBEG00000015545	-	83	66.507	Labrus_bergylta
ENSCVAG00000012526	-	81	58.581	ENSLACG00000001637	TUT7	62	58.581	Latimeria_chalumnae
ENSCVAG00000012526	-	86	59.034	ENSLOCG00000002472	TUT7	66	61.538	Lepisosteus_oculatus
ENSCVAG00000012526	-	98	46.947	ENSLAFG00000007884	TUT7	71	66.434	Loxodonta_africana
ENSCVAG00000012526	-	72	61.029	ENSMFAG00000000971	TUT7	95	52.670	Macaca_fascicularis
ENSCVAG00000012526	-	72	60.440	ENSMMUG00000003401	TUT7	95	52.670	Macaca_mulatta
ENSCVAG00000012526	-	71	61.869	ENSMNEG00000031427	TUT7	95	52.670	Macaca_nemestrina
ENSCVAG00000012526	-	71	61.869	ENSMLEG00000027049	TUT7	95	52.670	Mandrillus_leucophaeus
ENSCVAG00000012526	-	98	75.253	ENSMAMG00000011815	TUT7	99	74.530	Mastacembelus_armatus
ENSCVAG00000012526	-	98	71.389	ENSMZEG00005012809	TUT7	94	70.851	Maylandia_zebra
ENSCVAG00000012526	-	61	65.321	ENSMGAG00000006542	TUT7	62	55.009	Meleagris_gallopavo
ENSCVAG00000012526	-	83	56.006	ENSMAUG00000006963	-	64	56.689	Mesocricetus_auratus
ENSCVAG00000012526	-	73	60.073	ENSMICG00000016944	TUT7	94	52.742	Microcebus_murinus
ENSCVAG00000012526	-	83	56.981	ENSMOCG00000007812	-	95	52.758	Microtus_ochrogaster
ENSCVAG00000012526	-	70	62.095	ENSMODG00000003542	TUT7	60	62.095	Monodelphis_domestica
ENSCVAG00000012526	-	98	74.026	ENSMALG00000000634	TUT7	95	73.304	Monopterus_albus
ENSCVAG00000012526	-	78	57.311	MGP_CAROLIEiJ_G0018612	-	63	57.000	Mus_caroli
ENSCVAG00000012526	-	71	60.976	ENSMUSG00000035248	Tut7	71	60.595	Mus_musculus
ENSCVAG00000012526	-	78	57.360	MGP_PahariEiJ_G0019676	-	65	57.047	Mus_pahari
ENSCVAG00000012526	-	72	60.110	MGP_SPRETEiJ_G0019491	-	67	60.259	Mus_spretus
ENSCVAG00000012526	-	70	62.049	ENSMPUG00000002191	TUT7	59	61.742	Mustela_putorius_furo
ENSCVAG00000012526	-	83	55.089	ENSMLUG00000001298	TUT7	62	60.000	Myotis_lucifugus
ENSCVAG00000012526	-	72	60.589	ENSNGAG00000022758	-	94	52.206	Nannospalax_galili
ENSCVAG00000012526	-	98	72.325	ENSNBRG00000021961	TUT7	95	71.755	Neolamprologus_brichardi
ENSCVAG00000012526	-	72	60.550	ENSNLEG00000005138	TUT7	95	52.174	Nomascus_leucogenys
ENSCVAG00000012526	-	72	60.037	ENSODEG00000006904	-	92	51.970	Octodon_degus
ENSCVAG00000012526	-	88	74.686	ENSONIG00000017001	TUT7	97	74.214	Oreochromis_niloticus
ENSCVAG00000012526	-	70	60.985	ENSOCUG00000010949	TUT7	57	60.795	Oryctolagus_cuniculus
ENSCVAG00000012526	-	98	60.172	ENSORLG00000001714	-	97	59.456	Oryzias_latipes
ENSCVAG00000012526	-	98	64.029	ENSORLG00020007882	-	97	63.309	Oryzias_latipes_hni
ENSCVAG00000012526	-	98	60.000	ENSORLG00015017233	-	97	59.420	Oryzias_latipes_hsok
ENSCVAG00000012526	-	79	73.503	ENSOMEG00000015528	-	91	66.179	Oryzias_melastigma
ENSCVAG00000012526	-	72	61.142	ENSOGAG00000015630	TUT7	61	60.958	Otolemur_garnettii
ENSCVAG00000012526	-	72	60.556	ENSOARG00000008732	TUT7	67	56.209	Ovis_aries
ENSCVAG00000012526	-	72	60.734	ENSPPAG00000038548	TUT7	95	52.174	Pan_paniscus
ENSCVAG00000012526	-	72	60.846	ENSPPRG00000011084	TUT7	95	52.758	Panthera_pardus
ENSCVAG00000012526	-	72	60.846	ENSPTIG00000007881	TUT7	95	52.758	Panthera_tigris_altaica
ENSCVAG00000012526	-	72	60.550	ENSPTRG00000021076	TUT7	95	52.174	Pan_troglodytes
ENSCVAG00000012526	-	72	60.440	ENSPANG00000024890	TUT7	95	52.670	Papio_anubis
ENSCVAG00000012526	-	81	65.271	ENSPKIG00000022326	TUT7	61	65.271	Paramormyrops_kingsleyae
ENSCVAG00000012526	-	70	63.567	ENSPSIG00000003600	TUT7	58	63.118	Pelodiscus_sinensis
ENSCVAG00000012526	-	52	66.574	ENSPMGG00000012649	-	93	66.574	Periophthalmus_magnuspinnatus
ENSCVAG00000012526	-	84	54.936	ENSPEMG00000014030	-	65	57.525	Peromyscus_maniculatus_bairdii
ENSCVAG00000012526	-	70	62.239	ENSPCIG00000018302	TUT7	61	62.239	Phascolarctos_cinereus
ENSCVAG00000012526	-	92	80.061	ENSPFOG00000011606	-	91	79.294	Poecilia_formosa
ENSCVAG00000012526	-	98	80.775	ENSPLAG00000006121	TUT7	95	80.201	Poecilia_latipinna
ENSCVAG00000012526	-	50	74.644	ENSPMEG00000015937	-	97	74.644	Poecilia_mexicana
ENSCVAG00000012526	-	99	72.869	ENSPREG00000009118	TUT7	95	75.107	Poecilia_reticulata
ENSCVAG00000012526	-	72	60.367	ENSPPYG00000019340	TUT7	62	60.550	Pongo_abelii
ENSCVAG00000012526	-	72	59.817	ENSPCOG00000023407	TUT7	99	51.932	Propithecus_coquereli
ENSCVAG00000012526	-	98	71.309	ENSPNYG00000004149	TUT7	94	70.711	Pundamilia_nyererei
ENSCVAG00000012526	-	84	54.560	ENSRNOG00000016629	Tut7	65	56.998	Rattus_norvegicus
ENSCVAG00000012526	-	71	61.869	ENSRBIG00000016827	TUT7	95	52.670	Rhinopithecus_bieti
ENSCVAG00000012526	-	71	61.869	ENSRROG00000034432	TUT7	95	52.670	Rhinopithecus_roxellana
ENSCVAG00000012526	-	70	62.429	ENSSHAG00000008290	TUT7	59	62.429	Sarcophilus_harrisii
ENSCVAG00000012526	-	99	61.102	ENSSFOG00015009813	zcchc6	62	64.395	Scleropages_formosus
ENSCVAG00000012526	-	98	73.381	ENSSDUG00000012876	TUT7	96	72.662	Seriola_dumerili
ENSCVAG00000012526	-	51	71.667	ENSSLDG00000019107	-	88	71.667	Seriola_lalandi_dorsalis
ENSCVAG00000012526	-	62	65.046	ENSSARG00000009763	TUT7	56	65.046	Sorex_araneus
ENSCVAG00000012526	-	92	52.086	ENSSPUG00000004029	TUT7	62	62.075	Sphenodon_punctatus
ENSCVAG00000012526	-	98	70.000	ENSSPAG00000018387	-	96	69.143	Stegastes_partitus
ENSCVAG00000012526	-	73	61.101	ENSSSCG00000010952	TUT7	62	61.255	Sus_scrofa
ENSCVAG00000012526	-	71	62.430	ENSTGUG00000000624	TUT7	61	63.396	Taeniopygia_guttata
ENSCVAG00000012526	-	52	69.146	ENSTRUG00000023807	-	92	69.146	Takifugu_rubripes
ENSCVAG00000012526	-	91	70.095	ENSTNIG00000015951	TUT7	89	70.095	Tetraodon_nigroviridis
ENSCVAG00000012526	-	72	51.193	ENSTBEG00000010446	TUT7	62	51.376	Tupaia_belangeri
ENSCVAG00000012526	-	68	61.004	ENSUAMG00000027094	-	91	61.197	Ursus_americanus
ENSCVAG00000012526	-	81	56.098	ENSUMAG00000004929	TUT7	66	56.260	Ursus_maritimus
ENSCVAG00000012526	-	69	57.996	ENSVPAG00000001946	TUT7	58	57.143	Vicugna_pacos
ENSCVAG00000012526	-	81	56.792	ENSVVUG00000022427	TUT7	67	57.119	Vulpes_vulpes
ENSCVAG00000012526	-	81	57.586	ENSXETG00000017552	tut7	62	57.730	Xenopus_tropicalis
ENSCVAG00000012526	-	98	81.686	ENSXCOG00000009445	-	83	80.959	Xiphophorus_couchianus
ENSCVAG00000012526	-	50	75.214	ENSXMAG00000028804	-	97	75.214	Xiphophorus_maculatus