EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000012637 (Gene tree)
Gene ID: 107091875
Gene Symbol: hnrnpa1a
Alias: zgc:66127
Full Name: heterogeneous nuclear ribonucleoprotein A1-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 4934 bases
Position: chrKL652516.1:2033842-2038775
Accession: 107091875
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000010471	RRM_1	PF00076.22	8e-35	1	2
ENSCVAP00000010471	RRM_1	PF00076.22	8e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000017187	-	3741	XM_015386062	ENSCVAP00000010471	338 (aa)	XP_015241548	UPI0007425B4E

Gene Model

Click here to download ENSCVAG00000012637's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000012637's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000012637	hnrnpa1a	59	40.933	ENSCVAG00000017075	msi2a	57	41.860
ENSCVAG00000012637	hnrnpa1a	50	38.824	ENSCVAG00000019772	hnrnpaba	62	35.874
ENSCVAG00000012637	hnrnpa1a	56	40.957	ENSCVAG00000009100	MSI1	54	41.304
ENSCVAG00000012637	hnrnpa1a	66	49.099	ENSCVAG00000008324	-	77	55.307
ENSCVAG00000012637	hnrnpa1a	50	38.824	ENSCVAG00000002489	-	65	34.821
ENSCVAG00000012637	hnrnpa1a	66	38.667	ENSCVAG00000019790	hnrnpd	64	37.668

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000012637	hnrnpa1a	66	95.516	ENSAPOG00000019369	-	68	95.111	Acanthochromis_polyacanthus
ENSCVAG00000012637	hnrnpa1a	52	56.497	ENSACIG00000021815	-	86	56.497	Amphilophus_citrinellus
ENSCVAG00000012637	hnrnpa1a	66	95.516	ENSAOCG00000005289	-	68	95.111	Amphiprion_ocellaris
ENSCVAG00000012637	hnrnpa1a	66	95.516	ENSAPEG00000004179	-	68	95.111	Amphiprion_percula
ENSCVAG00000012637	hnrnpa1a	52	59.748	ENSATEG00000003423	-	75	59.748	Anabas_testudineus
ENSCVAG00000012637	hnrnpa1a	90	89.180	ENSATEG00000022918	hnrnpa1a	88	94.681	Anabas_testudineus
ENSCVAG00000012637	hnrnpa1a	54	56.044	ENSACAG00000017109	-	64	50.455	Anolis_carolinensis
ENSCVAG00000012637	hnrnpa1a	66	93.363	ENSACLG00000006940	-	68	92.982	Astatotilapia_calliptera
ENSCVAG00000012637	hnrnpa1a	54	63.842	ENSAMXG00000037730	-	64	57.407	Astyanax_mexicanus
ENSCVAG00000012637	hnrnpa1a	54	54.190	ENSCSEG00000014051	-	73	53.672	Cynoglossus_semilaevis
ENSCVAG00000012637	hnrnpa1a	66	86.784	ENSCSEG00000007589	hnrnpa1a	80	82.870	Cynoglossus_semilaevis
ENSCVAG00000012637	hnrnpa1a	54	61.453	ENSGMOG00000020353	-	94	61.453	Gadus_morhua
ENSCVAG00000012637	hnrnpa1a	53	55.056	ENSGAFG00000016803	-	53	55.056	Gambusia_affinis
ENSCVAG00000012637	hnrnpa1a	100	97.640	ENSGAFG00000007751	-	100	97.640	Gambusia_affinis
ENSCVAG00000012637	hnrnpa1a	62	89.888	ENSGACG00000009435	-	87	78.868	Gasterosteus_aculeatus
ENSCVAG00000012637	hnrnpa1a	66	93.363	ENSHBUG00000005647	hnrnpa1a	68	92.544	Haplochromis_burtoni
ENSCVAG00000012637	hnrnpa1a	57	84.021	ENSIPUG00000022440	-	71	85.542	Ictalurus_punctatus
ENSCVAG00000012637	hnrnpa1a	54	63.277	ENSIPUG00000001991	-	77	62.921	Ictalurus_punctatus
ENSCVAG00000012637	hnrnpa1a	69	72.961	ENSIPUG00000002023	hnrnpa1a	75	84.831	Ictalurus_punctatus
ENSCVAG00000012637	hnrnpa1a	53	66.111	ENSJJAG00000009178	-	89	50.314	Jaculus_jaculus
ENSCVAG00000012637	hnrnpa1a	100	85.965	ENSKMAG00000020859	-	67	96.444	Kryptolebias_marmoratus
ENSCVAG00000012637	hnrnpa1a	66	90.708	ENSLBEG00000010010	hnrnpa1a	66	90.351	Labrus_bergylta
ENSCVAG00000012637	hnrnpa1a	54	71.739	ENSMFAG00000028351	-	65	64.317	Macaca_fascicularis
ENSCVAG00000012637	hnrnpa1a	66	95.067	ENSMAMG00000007606	-	66	92.444	Mastacembelus_armatus
ENSCVAG00000012637	hnrnpa1a	66	93.363	ENSMZEG00005027173	hnrnpa1a	68	92.544	Maylandia_zebra
ENSCVAG00000012637	hnrnpa1a	59	91.500	ENSMMOG00000008251	hnrnpa1a	95	83.913	Mola_mola
ENSCVAG00000012637	hnrnpa1a	52	56.497	ENSMALG00000008886	-	86	56.497	Monopterus_albus
ENSCVAG00000012637	hnrnpa1a	66	95.067	ENSMALG00000014091	hnrnpa1a	65	92.444	Monopterus_albus
ENSCVAG00000012637	hnrnpa1a	90	85.668	ENSNBRG00000018441	-	91	85.668	Neolamprologus_brichardi
ENSCVAG00000012637	hnrnpa1a	57	58.511	ENSNBRG00000014469	-	82	60.227	Neolamprologus_brichardi
ENSCVAG00000012637	hnrnpa1a	53	52.874	ENSORLG00000029240	-	94	52.874	Oryzias_latipes
ENSCVAG00000012637	hnrnpa1a	90	81.967	ENSORLG00000008001	-	69	92.920	Oryzias_latipes
ENSCVAG00000012637	hnrnpa1a	88	42.424	ENSORLG00020006043	-	59	51.724	Oryzias_latipes_hni
ENSCVAG00000012637	hnrnpa1a	90	81.967	ENSORLG00020006582	hnrnpa1a	98	89.952	Oryzias_latipes_hni
ENSCVAG00000012637	hnrnpa1a	57	50.376	ENSORLG00020022498	-	80	52.299	Oryzias_latipes_hni
ENSCVAG00000012637	hnrnpa1a	90	82.295	ENSORLG00015022294	-	69	93.363	Oryzias_latipes_hsok
ENSCVAG00000012637	hnrnpa1a	100	82.698	ENSOMEG00000015959	-	69	93.805	Oryzias_melastigma
ENSCVAG00000012637	hnrnpa1a	68	82.684	ENSPMGG00000011804	hnrnpa1a	76	87.215	Periophthalmus_magnuspinnatus
ENSCVAG00000012637	hnrnpa1a	52	59.538	ENSPMGG00000016392	-	93	59.538	Periophthalmus_magnuspinnatus
ENSCVAG00000012637	hnrnpa1a	100	97.345	ENSPFOG00000001825	-	100	97.345	Poecilia_formosa
ENSCVAG00000012637	hnrnpa1a	100	97.345	ENSPMEG00000002425	-	100	97.345	Poecilia_mexicana
ENSCVAG00000012637	hnrnpa1a	57	58.511	ENSPNYG00000020729	-	90	60.227	Pundamilia_nyererei
ENSCVAG00000012637	hnrnpa1a	55	85.027	ENSPNAG00000021630	-	91	65.179	Pygocentrus_nattereri
ENSCVAG00000012637	hnrnpa1a	68	72.052	ENSPNAG00000007752	hnrnpa1a	93	73.276	Pygocentrus_nattereri
ENSCVAG00000012637	hnrnpa1a	62	91.469	ENSSMAG00000004641	hnrnpa1a	90	80.189	Scophthalmus_maximus
ENSCVAG00000012637	hnrnpa1a	53	59.036	ENSSMAG00000010279	-	93	59.036	Scophthalmus_maximus
ENSCVAG00000012637	hnrnpa1a	52	56.250	ENSSMAG00000010246	-	78	56.250	Scophthalmus_maximus
ENSCVAG00000012637	hnrnpa1a	52	60.819	ENSSDUG00000002431	-	81	60.819	Seriola_dumerili
ENSCVAG00000012637	hnrnpa1a	89	96.842	ENSSDUG00000013908	hnrnpa1a	95	86.087	Seriola_dumerili
ENSCVAG00000012637	hnrnpa1a	89	76.680	ENSSLDG00000003718	hnrnpa1a	95	86.087	Seriola_lalandi_dorsalis
ENSCVAG00000012637	hnrnpa1a	91	82.736	ENSSPAG00000018518	-	68	92.889	Stegastes_partitus
ENSCVAG00000012637	hnrnpa1a	65	87.892	ENSTRUG00000020491	-	69	87.225	Takifugu_rubripes
ENSCVAG00000012637	hnrnpa1a	75	50.400	ENSTNIG00000007398	-	81	55.046	Tetraodon_nigroviridis
ENSCVAG00000012637	hnrnpa1a	81	80.657	ENSXCOG00000009001	-	99	81.022	Xiphophorus_couchianus
ENSCVAG00000012637	hnrnpa1a	100	96.774	ENSXMAG00000008076	-	100	96.774	Xiphophorus_maculatus