EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000012682 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 2299 bases
Position: chrKL654987.1:14075-16373
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000010537	zf-C2H2	PF00096.26	2.7e-18	1	3
ENSCVAP00000010537	zf-C2H2	PF00096.26	2.7e-18	2	3
ENSCVAP00000010537	zf-C2H2	PF00096.26	2.7e-18	3	3
ENSCVAP00000010537	zf-met	PF12874.7	2.3e-11	1	3
ENSCVAP00000010537	zf-met	PF12874.7	2.3e-11	2	3
ENSCVAP00000010537	zf-met	PF12874.7	2.3e-11	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000029586	-	516	-	ENSCVAP00000010537	171 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000012682's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000012682's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000012682	-	67	53.684	ENSCVAG00000020119	-	70	53.684
ENSCVAG00000012682	-	69	56.842	ENSCVAG00000012248	-	90	56.842
ENSCVAG00000012682	-	73	50.000	ENSCVAG00000002295	-	78	50.000
ENSCVAG00000012682	-	74	50.000	ENSCVAG00000002506	-	95	50.000
ENSCVAG00000012682	-	75	51.471	ENSCVAG00000002500	-	86	51.471
ENSCVAG00000012682	-	55	43.478	ENSCVAG00000002502	-	95	43.478
ENSCVAG00000012682	-	93	58.947	ENSCVAG00000016796	-	82	58.947
ENSCVAG00000012682	-	79	58.974	ENSCVAG00000019705	-	71	58.974
ENSCVAG00000012682	-	79	47.059	ENSCVAG00000004382	-	97	47.059
ENSCVAG00000012682	-	75	50.000	ENSCVAG00000004388	-	57	50.000
ENSCVAG00000012682	-	88	47.525	ENSCVAG00000021225	-	90	51.579
ENSCVAG00000012682	-	56	46.667	ENSCVAG00000019519	-	58	46.667
ENSCVAG00000012682	-	67	53.191	ENSCVAG00000020126	-	70	53.191
ENSCVAG00000012682	-	75	47.917	ENSCVAG00000009752	-	63	47.917
ENSCVAG00000012682	-	74	50.794	ENSCVAG00000014269	-	97	50.794
ENSCVAG00000012682	-	98	63.158	ENSCVAG00000010442	-	95	64.894
ENSCVAG00000012682	-	83	64.583	ENSCVAG00000008535	-	73	64.583
ENSCVAG00000012682	-	81	47.826	ENSCVAG00000018383	-	92	47.826
ENSCVAG00000012682	-	67	49.038	ENSCVAG00000023054	-	56	49.038
ENSCVAG00000012682	-	84	47.727	ENSCVAG00000002284	-	65	47.191
ENSCVAG00000012682	-	87	45.263	ENSCVAG00000009258	znf319b	62	45.263
ENSCVAG00000012682	-	74	63.158	ENSCVAG00000017511	-	100	63.158
ENSCVAG00000012682	-	79	57.292	ENSCVAG00000012284	-	79	57.292
ENSCVAG00000012682	-	92	47.222	ENSCVAG00000000423	-	94	47.222
ENSCVAG00000012682	-	78	53.125	ENSCVAG00000016862	-	89	53.125
ENSCVAG00000012682	-	60	65.263	ENSCVAG00000012620	-	100	65.263
ENSCVAG00000012682	-	72	46.847	ENSCVAG00000020155	-	88	46.847
ENSCVAG00000012682	-	72	57.692	ENSCVAG00000019646	-	88	57.692
ENSCVAG00000012682	-	85	58.947	ENSCVAG00000001417	-	98	58.947
ENSCVAG00000012682	-	64	47.368	ENSCVAG00000004508	-	56	47.368
ENSCVAG00000012682	-	57	47.368	ENSCVAG00000009747	-	56	47.368
ENSCVAG00000012682	-	67	55.682	ENSCVAG00000013382	-	60	55.682
ENSCVAG00000012682	-	76	68.421	ENSCVAG00000012343	-	97	68.421
ENSCVAG00000012682	-	93	63.158	ENSCVAG00000008206	-	88	63.158
ENSCVAG00000012682	-	79	61.053	ENSCVAG00000008200	-	93	61.053
ENSCVAG00000012682	-	67	52.809	ENSCVAG00000007169	-	51	52.809
ENSCVAG00000012682	-	64	50.962	ENSCVAG00000002488	-	72	50.962
ENSCVAG00000012682	-	78	55.556	ENSCVAG00000022991	-	95	53.684
ENSCVAG00000012682	-	67	45.361	ENSCVAG00000013692	prdm5	59	45.361
ENSCVAG00000012682	-	67	54.286	ENSCVAG00000001444	-	94	54.286
ENSCVAG00000012682	-	59	44.898	ENSCVAG00000003417	-	58	44.898
ENSCVAG00000012682	-	86	58.095	ENSCVAG00000001767	-	83	58.095
ENSCVAG00000012682	-	65	41.379	ENSCVAG00000000161	-	50	41.379
ENSCVAG00000012682	-	80	57.627	ENSCVAG00000012228	-	82	57.627
ENSCVAG00000012682	-	86	55.789	ENSCVAG00000014322	-	95	55.789
ENSCVAG00000012682	-	81	46.316	ENSCVAG00000008836	-	58	46.316
ENSCVAG00000012682	-	72	60.000	ENSCVAG00000011469	-	95	60.000
ENSCVAG00000012682	-	78	48.515	ENSCVAG00000020745	-	91	48.515
ENSCVAG00000012682	-	82	60.465	ENSCVAG00000001609	-	86	60.465
ENSCVAG00000012682	-	64	46.591	ENSCVAG00000016898	-	85	46.591
ENSCVAG00000012682	-	68	50.000	ENSCVAG00000001369	-	73	50.000
ENSCVAG00000012682	-	85	55.238	ENSCVAG00000005494	-	93	55.238
ENSCVAG00000012682	-	71	42.105	ENSCVAG00000016483	snai2	59	42.105
ENSCVAG00000012682	-	73	43.158	ENSCVAG00000013048	-	57	43.158
ENSCVAG00000012682	-	93	60.000	ENSCVAG00000007073	-	77	60.000
ENSCVAG00000012682	-	74	47.917	ENSCVAG00000022174	-	59	47.917
ENSCVAG00000012682	-	84	50.485	ENSCVAG00000006491	-	75	50.485
ENSCVAG00000012682	-	65	52.632	ENSCVAG00000003512	-	97	52.632
ENSCVAG00000012682	-	67	58.696	ENSCVAG00000006667	-	50	58.696
ENSCVAG00000012682	-	74	54.808	ENSCVAG00000005507	-	90	54.808
ENSCVAG00000012682	-	95	48.276	ENSCVAG00000019537	-	86	48.276
ENSCVAG00000012682	-	83	43.158	ENSCVAG00000003250	-	70	43.158
ENSCVAG00000012682	-	95	53.684	ENSCVAG00000016181	-	93	53.684
ENSCVAG00000012682	-	61	50.526	ENSCVAG00000003630	-	57	46.789
ENSCVAG00000012682	-	61	47.368	ENSCVAG00000019097	-	61	42.268
ENSCVAG00000012682	-	66	49.462	ENSCVAG00000018135	-	84	49.462
ENSCVAG00000012682	-	90	55.455	ENSCVAG00000020938	-	100	55.455
ENSCVAG00000012682	-	68	52.083	ENSCVAG00000012520	-	82	52.083
ENSCVAG00000012682	-	77	53.125	ENSCVAG00000019764	-	66	53.125
ENSCVAG00000012682	-	64	52.632	ENSCVAG00000019767	-	55	52.632
ENSCVAG00000012682	-	96	55.645	ENSCVAG00000010160	-	84	55.645
ENSCVAG00000012682	-	67	49.474	ENSCVAG00000016915	-	50	49.474
ENSCVAG00000012682	-	78	52.632	ENSCVAG00000013337	-	93	52.632
ENSCVAG00000012682	-	70	45.745	ENSCVAG00000014734	-	92	45.745
ENSCVAG00000012682	-	74	53.684	ENSCVAG00000012302	-	84	53.684
ENSCVAG00000012682	-	91	65.263	ENSCVAG00000014404	-	96	65.263
ENSCVAG00000012682	-	79	39.655	ENSCVAG00000018485	-	95	39.655
ENSCVAG00000012682	-	64	45.833	ENSCVAG00000000351	-	67	45.833
ENSCVAG00000012682	-	81	56.566	ENSCVAG00000012543	-	99	56.383
ENSCVAG00000012682	-	72	52.381	ENSCVAG00000000227	-	70	52.381
ENSCVAG00000012682	-	71	51.579	ENSCVAG00000014622	-	69	52.632
ENSCVAG00000012682	-	67	45.763	ENSCVAG00000003396	-	60	45.763
ENSCVAG00000012682	-	77	50.000	ENSCVAG00000004958	-	87	48.980
ENSCVAG00000012682	-	73	50.000	ENSCVAG00000000419	-	62	50.000
ENSCVAG00000012682	-	98	65.263	ENSCVAG00000011334	-	88	65.263
ENSCVAG00000012682	-	66	34.259	ENSCVAG00000019122	-	97	34.259
ENSCVAG00000012682	-	82	42.991	ENSCVAG00000011235	-	87	42.991
ENSCVAG00000012682	-	80	69.474	ENSCVAG00000017515	-	95	69.474
ENSCVAG00000012682	-	75	52.632	ENSCVAG00000017890	-	88	52.632
ENSCVAG00000012682	-	86	44.211	ENSCVAG00000003601	ZNF319	65	44.211
ENSCVAG00000012682	-	81	54.737	ENSCVAG00000004368	-	74	54.737
ENSCVAG00000012682	-	56	46.667	ENSCVAG00000000144	-	67	46.667
ENSCVAG00000012682	-	63	56.061	ENSCVAG00000012207	-	85	56.061
ENSCVAG00000012682	-	68	47.423	ENSCVAG00000005112	-	76	47.423
ENSCVAG00000012682	-	83	54.464	ENSCVAG00000002833	-	71	54.464
ENSCVAG00000012682	-	70	49.138	ENSCVAG00000006673	-	56	49.138
ENSCVAG00000012682	-	68	55.963	ENSCVAG00000002252	-	91	55.963
ENSCVAG00000012682	-	74	44.828	ENSCVAG00000017168	gfi1b	60	44.828
ENSCVAG00000012682	-	65	52.809	ENSCVAG00000008952	-	91	52.809
ENSCVAG00000012682	-	92	55.789	ENSCVAG00000012180	-	97	55.789
ENSCVAG00000012682	-	77	57.534	ENSCVAG00000003428	-	96	57.534
ENSCVAG00000012682	-	76	55.200	ENSCVAG00000009103	-	84	55.200
ENSCVAG00000012682	-	64	48.837	ENSCVAG00000017005	sall3b	55	53.125
ENSCVAG00000012682	-	82	62.766	ENSCVAG00000007051	-	98	62.766
ENSCVAG00000012682	-	70	68.421	ENSCVAG00000001568	-	81	68.421
ENSCVAG00000012682	-	74	47.826	ENSCVAG00000016092	-	51	47.826
ENSCVAG00000012682	-	61	51.961	ENSCVAG00000002307	-	63	51.961
ENSCVAG00000012682	-	77	56.989	ENSCVAG00000002305	-	74	56.989
ENSCVAG00000012682	-	85	50.526	ENSCVAG00000003497	-	93	52.632
ENSCVAG00000012682	-	79	46.429	ENSCVAG00000015616	-	87	46.429
ENSCVAG00000012682	-	85	54.737	ENSCVAG00000021107	-	96	52.632
ENSCVAG00000012682	-	75	48.092	ENSCVAG00000015153	-	76	48.092
ENSCVAG00000012682	-	97	53.684	ENSCVAG00000003514	-	92	53.684
ENSCVAG00000012682	-	82	50.526	ENSCVAG00000006460	-	75	50.526
ENSCVAG00000012682	-	79	62.105	ENSCVAG00000009981	-	91	62.105
ENSCVAG00000012682	-	64	47.872	ENSCVAG00000006653	-	56	47.872
ENSCVAG00000012682	-	84	57.576	ENSCVAG00000012399	-	83	57.576
ENSCVAG00000012682	-	73	48.515	ENSCVAG00000012216	-	81	48.515
ENSCVAG00000012682	-	79	70.192	ENSCVAG00000006389	-	100	70.192
ENSCVAG00000012682	-	58	43.158	ENSCVAG00000018507	-	72	43.158
ENSCVAG00000012682	-	61	64.583	ENSCVAG00000009827	-	96	64.583
ENSCVAG00000012682	-	74	69.841	ENSCVAG00000011213	-	96	70.297
ENSCVAG00000012682	-	99	64.211	ENSCVAG00000002242	-	90	64.211
ENSCVAG00000012682	-	75	56.028	ENSCVAG00000016964	-	97	56.028
ENSCVAG00000012682	-	75	48.214	ENSCVAG00000003433	-	93	48.214
ENSCVAG00000012682	-	73	53.125	ENSCVAG00000003434	-	91	53.125

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000012682	-	61	51.471	ENSAPOG00000019138	-	54	51.471	Acanthochromis_polyacanthus
ENSCVAG00000012682	-	73	46.875	ENSACIG00000017892	-	81	46.875	Amphilophus_citrinellus
ENSCVAG00000012682	-	70	55.208	ENSACIG00000004641	-	54	55.208	Amphilophus_citrinellus
ENSCVAG00000012682	-	84	45.833	ENSAOCG00000016897	-	63	45.833	Amphiprion_ocellaris
ENSCVAG00000012682	-	67	45.652	ENSAOCG00000001325	-	62	45.652	Amphiprion_ocellaris
ENSCVAG00000012682	-	79	45.833	ENSAPEG00000001556	-	63	45.833	Amphiprion_percula
ENSCVAG00000012682	-	76	47.778	ENSATEG00000018931	-	79	47.778	Anabas_testudineus
ENSCVAG00000012682	-	56	49.091	ENSACLG00000019154	-	75	49.091	Astatotilapia_calliptera
ENSCVAG00000012682	-	64	44.681	ENSACLG00000011658	-	70	44.681	Astatotilapia_calliptera
ENSCVAG00000012682	-	61	49.153	ENSAMXG00000029518	-	52	49.153	Astyanax_mexicanus
ENSCVAG00000012682	-	67	51.667	ENSCSEG00000015593	-	76	51.667	Cynoglossus_semilaevis
ENSCVAG00000012682	-	63	46.154	ENSCSEG00000010264	-	64	46.154	Cynoglossus_semilaevis
ENSCVAG00000012682	-	65	52.632	ENSCSEG00000010453	-	53	52.632	Cynoglossus_semilaevis
ENSCVAG00000012682	-	66	49.462	ENSEBUG00000014432	-	73	49.462	Eptatretus_burgeri
ENSCVAG00000012682	-	73	46.341	ENSEBUG00000007931	-	60	46.341	Eptatretus_burgeri
ENSCVAG00000012682	-	63	47.059	ENSELUG00000001909	-	74	40.476	Esox_lucius
ENSCVAG00000012682	-	67	46.809	ENSELUG00000024007	-	57	46.809	Esox_lucius
ENSCVAG00000012682	-	72	47.368	ENSGAFG00000001879	-	87	47.368	Gambusia_affinis
ENSCVAG00000012682	-	72	53.684	ENSGAFG00000008204	-	70	53.684	Gambusia_affinis
ENSCVAG00000012682	-	64	38.739	ENSHBUG00000006656	-	56	40.860	Haplochromis_burtoni
ENSCVAG00000012682	-	83	51.042	ENSHCOG00000008550	-	56	51.042	Hippocampus_comes
ENSCVAG00000012682	-	83	51.042	ENSHCOG00000001873	-	56	51.042	Hippocampus_comes
ENSCVAG00000012682	-	71	51.685	ENSHCOG00000020670	-	72	51.685	Hippocampus_comes
ENSCVAG00000012682	-	68	53.333	ENSHCOG00000013489	-	89	50.000	Hippocampus_comes
ENSCVAG00000012682	-	77	42.308	ENSHCOG00000008227	-	55	42.308	Hippocampus_comes
ENSCVAG00000012682	-	60	52.000	ENSHCOG00000015497	-	73	52.000	Hippocampus_comes
ENSCVAG00000012682	-	56	35.052	ENSKMAG00000014184	-	53	35.052	Kryptolebias_marmoratus
ENSCVAG00000012682	-	77	33.333	ENSKMAG00000007699	-	77	33.333	Kryptolebias_marmoratus
ENSCVAG00000012682	-	59	48.000	ENSLBEG00000007106	-	60	48.000	Labrus_bergylta
ENSCVAG00000012682	-	68	42.697	ENSLBEG00000011210	-	59	42.697	Labrus_bergylta
ENSCVAG00000012682	-	78	44.872	ENSLBEG00000006161	-	87	44.872	Labrus_bergylta
ENSCVAG00000012682	-	79	47.778	ENSLBEG00000001132	-	77	47.778	Labrus_bergylta
ENSCVAG00000012682	-	58	41.026	ENSLBEG00000017424	-	91	41.026	Labrus_bergylta
ENSCVAG00000012682	-	94	42.593	ENSLOCG00000004208	-	98	44.211	Lepisosteus_oculatus
ENSCVAG00000012682	-	77	45.263	ENSMAMG00000017939	-	73	45.263	Mastacembelus_armatus
ENSCVAG00000012682	-	63	40.217	ENSMZEG00005013907	-	71	40.351	Maylandia_zebra
ENSCVAG00000012682	-	53	45.070	ENSMMOG00000013330	-	54	45.070	Mola_mola
ENSCVAG00000012682	-	67	43.750	ENSMALG00000004279	-	72	43.750	Monopterus_albus
ENSCVAG00000012682	-	57	43.373	ENSONIG00000005050	-	65	43.373	Oreochromis_niloticus
ENSCVAG00000012682	-	95	47.826	ENSONIG00000007967	-	56	47.826	Oreochromis_niloticus
ENSCVAG00000012682	-	69	50.000	ENSORLG00000021885	-	65	50.000	Oryzias_latipes
ENSCVAG00000012682	-	98	42.647	ENSORLG00000002268	-	77	43.158	Oryzias_latipes
ENSCVAG00000012682	-	75	44.792	ENSORLG00020018921	-	88	44.792	Oryzias_latipes_hni
ENSCVAG00000012682	-	61	49.020	ENSORLG00015018099	-	67	49.020	Oryzias_latipes_hsok
ENSCVAG00000012682	-	68	44.444	ENSOMEG00000005578	-	63	44.444	Oryzias_melastigma
ENSCVAG00000012682	-	56	51.111	ENSPMGG00000002659	-	81	51.064	Periophthalmus_magnuspinnatus
ENSCVAG00000012682	-	77	52.809	ENSPMGG00000009571	-	79	52.809	Periophthalmus_magnuspinnatus
ENSCVAG00000012682	-	80	58.947	ENSPMGG00000002661	-	60	58.947	Periophthalmus_magnuspinnatus
ENSCVAG00000012682	-	58	37.778	ENSPMGG00000019750	-	69	37.778	Periophthalmus_magnuspinnatus
ENSCVAG00000012682	-	84	38.655	ENSPMGG00000002455	-	87	43.617	Periophthalmus_magnuspinnatus
ENSCVAG00000012682	-	60	35.354	ENSPMAG00000004189	-	92	35.354	Petromyzon_marinus
ENSCVAG00000012682	-	56	41.026	ENSPMAG00000000839	-	86	41.026	Petromyzon_marinus
ENSCVAG00000012682	-	56	40.625	ENSPMAG00000002022	-	67	40.625	Petromyzon_marinus
ENSCVAG00000012682	-	77	50.526	ENSPFOG00000018860	-	97	50.526	Poecilia_formosa
ENSCVAG00000012682	-	72	47.368	ENSPFOG00000009491	-	71	47.368	Poecilia_formosa
ENSCVAG00000012682	-	76	51.042	ENSPLAG00000010067	-	68	51.042	Poecilia_latipinna
ENSCVAG00000012682	-	80	40.964	ENSPLAG00000014832	-	66	40.964	Poecilia_latipinna
ENSCVAG00000012682	-	79	46.316	ENSPLAG00000008941	-	87	46.316	Poecilia_latipinna
ENSCVAG00000012682	-	72	47.368	ENSPMEG00000024117	-	71	47.368	Poecilia_mexicana
ENSCVAG00000012682	-	80	40.964	ENSPMEG00000005210	-	66	40.964	Poecilia_mexicana
ENSCVAG00000012682	-	72	48.529	ENSPMEG00000002953	-	58	49.254	Poecilia_mexicana
ENSCVAG00000012682	-	63	47.191	ENSPREG00000009488	-	90	47.191	Poecilia_reticulata
ENSCVAG00000012682	-	63	46.575	ENSPREG00000002603	-	55	46.575	Poecilia_reticulata
ENSCVAG00000012682	-	74	40.496	ENSPNAG00000005946	-	90	40.496	Pygocentrus_nattereri
ENSCVAG00000012682	-	61	47.253	ENSSFOG00015011531	-	75	48.780	Scleropages_formosus
ENSCVAG00000012682	-	90	46.939	ENSSMAG00000013291	-	95	47.059	Scophthalmus_maximus
ENSCVAG00000012682	-	76	41.007	ENSSDUG00000020774	-	52	41.007	Seriola_dumerili
ENSCVAG00000012682	-	67	37.113	ENSSLDG00000014436	-	72	37.113	Seriola_lalandi_dorsalis
ENSCVAG00000012682	-	78	37.589	ENSSPAG00000011544	-	52	37.857	Stegastes_partitus
ENSCVAG00000012682	-	62	41.441	ENSSPAG00000011533	-	64	41.573	Stegastes_partitus
ENSCVAG00000012682	-	83	45.283	ENSXETG00000012506	znf91	100	45.283	Xenopus_tropicalis
ENSCVAG00000012682	-	58	48.148	ENSXCOG00000000254	-	62	48.148	Xiphophorus_couchianus
ENSCVAG00000012682	-	81	43.333	ENSXCOG00000003441	-	65	43.333	Xiphophorus_couchianus
ENSCVAG00000012682	-	63	49.474	ENSXCOG00000020768	-	63	49.474	Xiphophorus_couchianus
ENSCVAG00000012682	-	78	41.667	ENSXMAG00000012936	-	75	41.667	Xiphophorus_maculatus