EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000012706 (Gene tree)
Gene ID: 107084782
Gene Symbol: arl5c
Alias: zgc:77751
Full Name: ADP-ribosylation factor-like protein 5B
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 6736 bases
Position: chrKL652609.1:424717-431452
Accession: 107084782
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000010548	MMR_HSR1	PF01926.23	1.2e-07	1	1
ENSCVAP00000010535	MMR_HSR1	PF01926.23	1.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000017277	-	2564	XM_015374786	ENSCVAP00000010548	179 (aa)	XP_015230272	UPI000742C761
ENSCVAT00000017260	-	597	-	ENSCVAP00000010535	198 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000012706's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000012706's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000012706	arl5c	93	37.725	ENSCVAG00000010611	arl3l2	89	37.725
ENSCVAG00000012706	arl5c	100	47.778	ENSCVAG00000001271	arf3b	99	47.778
ENSCVAG00000012706	arl5c	90	39.881	ENSCVAG00000023139	-	89	39.306
ENSCVAG00000012706	arl5c	96	46.821	ENSCVAG00000009124	ARF5	96	46.821
ENSCVAG00000012706	arl5c	100	69.274	ENSCVAG00000020833	ARL5A	100	69.274
ENSCVAG00000012706	arl5c	84	40.132	ENSCVAG00000019595	arl11	88	40.132
ENSCVAG00000012706	arl5c	90	42.604	ENSCVAG00000020902	arl4cb	90	41.954
ENSCVAG00000012706	arl5c	72	42.657	ENSCVAG00000013902	-	89	42.657
ENSCVAG00000012706	arl5c	86	38.857	ENSCVAG00000016249	ARL6	92	38.857
ENSCVAG00000012706	arl5c	98	48.023	ENSCVAG00000000745	arf2b	98	48.023
ENSCVAG00000012706	arl5c	100	39.779	ENSCVAG00000021960	arl3	99	39.779
ENSCVAG00000012706	arl5c	93	41.566	ENSCVAG00000008445	arl2	90	41.566
ENSCVAG00000012706	arl5c	88	41.401	ENSCVAG00000016797	-	86	41.401
ENSCVAG00000012706	arl5c	93	42.775	ENSCVAG00000004305	arl4aa	86	42.775
ENSCVAG00000012706	arl5c	98	48.295	ENSCVAG00000018314	-	98	48.295
ENSCVAG00000012706	arl5c	98	48.864	ENSCVAG00000013374	-	98	48.864
ENSCVAG00000012706	arl5c	100	47.778	ENSCVAG00000013760	-	87	47.778
ENSCVAG00000012706	arl5c	98	48.295	ENSCVAG00000021619	-	98	48.295
ENSCVAG00000012706	arl5c	91	37.952	ENSCVAG00000015183	ARL6	97	36.313
ENSCVAG00000012706	arl5c	96	44.444	ENSCVAG00000001731	arl1	94	44.444
ENSCVAG00000012706	arl5c	96	46.821	ENSCVAG00000007314	-	96	46.821
ENSCVAG00000012706	arl5c	98	44.068	ENSCVAG00000011381	-	98	44.068
ENSCVAG00000012706	arl5c	98	70.286	ENSCVAG00000006913	arl8	98	70.286
ENSCVAG00000012706	arl5c	63	31.933	ENSCVAG00000010727	rab4a	54	31.933

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000012706	arl5c	100	88.827	ENSAPOG00000005821	arl5c	100	88.827	Acanthochromis_polyacanthus
ENSCVAG00000012706	arl5c	92	92.683	ENSACIG00000008975	arl5c	95	90.058	Amphilophus_citrinellus
ENSCVAG00000012706	arl5c	100	88.827	ENSAOCG00000010448	arl5c	100	88.827	Amphiprion_ocellaris
ENSCVAG00000012706	arl5c	100	88.827	ENSAPEG00000002699	arl5c	100	88.827	Amphiprion_percula
ENSCVAG00000012706	arl5c	99	88.136	ENSATEG00000000181	arl5c	99	88.136	Anabas_testudineus
ENSCVAG00000012706	arl5c	100	90.503	ENSACLG00000000922	arl5c	100	91.463	Astatotilapia_calliptera
ENSCVAG00000012706	arl5c	100	82.123	ENSAMXG00000031771	arl5c	100	82.123	Astyanax_mexicanus
ENSCVAG00000012706	arl5c	100	83.799	ENSCSEG00000009845	arl5c	100	83.799	Cynoglossus_semilaevis
ENSCVAG00000012706	arl5c	99	82.022	ENSDARG00000035719	arl5c	99	82.022	Danio_rerio
ENSCVAG00000012706	arl5c	99	85.955	ENSELUG00000016864	arl5c	99	85.955	Esox_lucius
ENSCVAG00000012706	arl5c	99	97.175	ENSFHEG00000013677	arl5c	99	97.175	Fundulus_heteroclitus
ENSCVAG00000012706	arl5c	100	96.089	ENSGAFG00000002547	arl5c	100	96.089	Gambusia_affinis
ENSCVAG00000012706	arl5c	100	89.944	ENSGACG00000009321	arl5c	100	89.944	Gasterosteus_aculeatus
ENSCVAG00000012706	arl5c	99	91.011	ENSHBUG00000007301	arl5c	99	91.011	Haplochromis_burtoni
ENSCVAG00000012706	arl5c	99	84.831	ENSHCOG00000017576	-	99	84.831	Hippocampus_comes
ENSCVAG00000012706	arl5c	100	82.123	ENSIPUG00000023232	arl5c	100	82.123	Ictalurus_punctatus
ENSCVAG00000012706	arl5c	99	93.220	ENSKMAG00000011323	arl5c	99	93.220	Kryptolebias_marmoratus
ENSCVAG00000012706	arl5c	100	88.268	ENSLBEG00000006177	arl5c	86	88.268	Labrus_bergylta
ENSCVAG00000012706	arl5c	99	87.640	ENSMAMG00000022157	arl5c	99	87.640	Mastacembelus_armatus
ENSCVAG00000012706	arl5c	99	91.011	ENSMZEG00005022925	arl5c	99	91.011	Maylandia_zebra
ENSCVAG00000012706	arl5c	92	90.854	ENSMMOG00000020851	arl5c	96	91.411	Mola_mola
ENSCVAG00000012706	arl5c	95	88.824	ENSMALG00000009306	arl5c	95	88.824	Monopterus_albus
ENSCVAG00000012706	arl5c	99	91.573	ENSNBRG00000020245	arl5c	100	92.073	Neolamprologus_brichardi
ENSCVAG00000012706	arl5c	99	91.573	ENSONIG00000000890	arl5c	99	91.573	Oreochromis_niloticus
ENSCVAG00000012706	arl5c	99	86.441	ENSORLG00000002960	arl5c	100	87.195	Oryzias_latipes
ENSCVAG00000012706	arl5c	99	86.441	ENSORLG00020010074	arl5c	100	87.195	Oryzias_latipes_hni
ENSCVAG00000012706	arl5c	99	86.441	ENSORLG00015002752	arl5c	100	87.195	Oryzias_latipes_hsok
ENSCVAG00000012706	arl5c	96	86.550	ENSOMEG00000021718	arl5c	97	86.550	Oryzias_melastigma
ENSCVAG00000012706	arl5c	99	84.270	ENSPKIG00000021727	arl5c	99	84.270	Paramormyrops_kingsleyae
ENSCVAG00000012706	arl5c	100	96.089	ENSPFOG00000007842	arl5c	99	96.089	Poecilia_formosa
ENSCVAG00000012706	arl5c	100	95.531	ENSPLAG00000002394	arl5c	100	95.531	Poecilia_latipinna
ENSCVAG00000012706	arl5c	91	97.546	ENSPMEG00000000631	arl5c	98	95.294	Poecilia_mexicana
ENSCVAG00000012706	arl5c	100	96.648	ENSPREG00000008730	arl5c	100	96.648	Poecilia_reticulata
ENSCVAG00000012706	arl5c	99	91.011	ENSPNYG00000012720	arl5c	100	91.463	Pundamilia_nyererei
ENSCVAG00000012706	arl5c	100	81.564	ENSPNAG00000002310	arl5c	100	81.564	Pygocentrus_nattereri
ENSCVAG00000012706	arl5c	100	82.123	ENSSFOG00015023529	arl5c	100	82.123	Scleropages_formosus
ENSCVAG00000012706	arl5c	100	88.268	ENSSMAG00000010552	arl5c	100	88.268	Scophthalmus_maximus
ENSCVAG00000012706	arl5c	100	86.592	ENSSDUG00000022640	arl5c	100	86.592	Seriola_dumerili
ENSCVAG00000012706	arl5c	100	86.592	ENSSLDG00000000728	arl5c	100	86.592	Seriola_lalandi_dorsalis
ENSCVAG00000012706	arl5c	100	89.385	ENSSPAG00000007687	arl5c	100	89.385	Stegastes_partitus
ENSCVAG00000012706	arl5c	99	89.326	ENSTRUG00000022814	arl5c	99	89.326	Takifugu_rubripes
ENSCVAG00000012706	arl5c	99	89.888	ENSTNIG00000003015	arl5c	99	89.888	Tetraodon_nigroviridis
ENSCVAG00000012706	arl5c	100	96.648	ENSXCOG00000017380	arl5c	100	96.648	Xiphophorus_couchianus
ENSCVAG00000012706	arl5c	100	96.089	ENSXMAG00000008447	arl5c	100	96.089	Xiphophorus_maculatus