EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000013010 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: serum response factor binding protein 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 4032 bases
Position: chrKL654951.1:21280-25311
Accession: 107080886
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000010826	BUD22	PF09073.10	6.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000017632	-	1140	XM_015369095	ENSCVAP00000010826	379 (aa)	XP_015224581	-

Gene Model

Click here to download ENSCVAG00000013010's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000013010's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000013010	-	97	39.906	ENSG00000151304	SRFBP1	99	40.189	Homo_sapiens
ENSCVAG00000013010	-	97	82.692	ENSAPOG00000021469	-	72	66.216	Acanthochromis_polyacanthus
ENSCVAG00000013010	-	99	36.574	ENSAMEG00000018050	SRFBP1	100	38.228	Ailuropoda_melanoleuca
ENSCVAG00000013010	-	99	51.825	ENSACIG00000019127	-	99	52.184	Amphilophus_citrinellus
ENSCVAG00000013010	-	97	80.769	ENSAOCG00000002182	-	69	72.581	Amphiprion_ocellaris
ENSCVAG00000013010	-	97	80.769	ENSAPEG00000003041	-	70	72.581	Amphiprion_percula
ENSCVAG00000013010	-	96	84.783	ENSATEG00000007289	-	85	44.720	Anabas_testudineus
ENSCVAG00000013010	-	97	37.995	ENSACAG00000003779	SRFBP1	99	37.063	Anolis_carolinensis
ENSCVAG00000013010	-	97	39.294	ENSANAG00000022485	SRFBP1	99	39.765	Aotus_nancymaae
ENSCVAG00000013010	-	99	44.958	ENSACLG00000013909	-	88	44.748	Astatotilapia_calliptera
ENSCVAG00000013010	-	72	60.163	ENSAMXG00000040976	srfbp1	51	58.462	Astyanax_mexicanus
ENSCVAG00000013010	-	97	40.749	ENSBTAG00000014320	SRFBP1	99	40.984	Bos_taurus
ENSCVAG00000013010	-	97	39.394	ENSCJAG00000017177	SRFBP1	99	39.437	Callithrix_jacchus
ENSCVAG00000013010	-	97	40.471	ENSCAFG00000000512	SRFBP1	99	40.235	Canis_familiaris
ENSCVAG00000013010	-	97	40.471	ENSCAFG00020009389	SRFBP1	99	40.235	Canis_lupus_dingo
ENSCVAG00000013010	-	96	40.714	ENSTSYG00000008630	-	98	41.190	Carlito_syrichta
ENSCVAG00000013010	-	96	30.348	ENSTSYG00000006869	-	99	30.326	Carlito_syrichta
ENSCVAG00000013010	-	98	37.916	ENSCPOG00000004695	SRFBP1	99	38.776	Cavia_porcellus
ENSCVAG00000013010	-	97	39.767	ENSCCAG00000032237	-	99	39.302	Cebus_capucinus
ENSCVAG00000013010	-	97	39.486	ENSCATG00000040904	SRFBP1	99	40.235	Cercocebus_atys
ENSCVAG00000013010	-	97	37.857	ENSCLAG00000003630	SRFBP1	99	38.333	Chinchilla_lanigera
ENSCVAG00000013010	-	97	39.294	ENSCSAG00000014636	SRFBP1	99	40.471	Chlorocebus_sabaeus
ENSCVAG00000013010	-	97	38.967	ENSCANG00000041298	SRFBP1	99	40.189	Colobus_angolensis_palliatus
ENSCVAG00000013010	-	97	39.860	ENSCGRG00001000718	Srfbp1	96	39.627	Cricetulus_griseus_chok1gshd
ENSCVAG00000013010	-	95	38.571	ENSCGRG00000010837	Srfbp1	100	38.333	Cricetulus_griseus_crigri
ENSCVAG00000013010	-	99	51.515	ENSCSEG00000011789	-	99	50.518	Cynoglossus_semilaevis
ENSCVAG00000013010	-	73	59.574	ENSDARG00000075323	srfbp1	61	59.574	Danio_rerio
ENSCVAG00000013010	-	75	33.908	ENSDNOG00000017733	SRFBP1	99	33.621	Dasypus_novemcinctus
ENSCVAG00000013010	-	75	32.515	ENSETEG00000012408	SRFBP1	100	31.707	Echinops_telfairi
ENSCVAG00000013010	-	97	39.813	ENSEASG00005012421	SRFBP1	99	39.110	Equus_asinus_asinus
ENSCVAG00000013010	-	97	39.813	ENSECAG00000015330	SRFBP1	99	39.110	Equus_caballus
ENSCVAG00000013010	-	97	35.664	ENSEEUG00000011514	SRFBP1	99	36.468	Erinaceus_europaeus
ENSCVAG00000013010	-	99	42.890	ENSELUG00000018381	-	97	43.529	Esox_lucius
ENSCVAG00000013010	-	97	39.151	ENSFCAG00000035118	SRFBP1	99	39.059	Felis_catus
ENSCVAG00000013010	-	95	35.748	ENSFALG00000007595	SRFBP1	100	35.748	Ficedula_albicollis
ENSCVAG00000013010	-	99	37.385	ENSFDAG00000005102	SRFBP1	100	37.097	Fukomys_damarensis
ENSCVAG00000013010	-	99	89.655	ENSFHEG00000000477	-	74	85.484	Fundulus_heteroclitus
ENSCVAG00000013010	-	97	41.623	ENSGMOG00000012729	-	85	42.969	Gadus_morhua
ENSCVAG00000013010	-	97	36.364	ENSGALG00000005316	SRFBP1	99	36.156	Gallus_gallus
ENSCVAG00000013010	-	99	74.286	ENSGAFG00000018777	-	76	74.286	Gambusia_affinis
ENSCVAG00000013010	-	98	45.735	ENSGACG00000009055	-	83	46.445	Gasterosteus_aculeatus
ENSCVAG00000013010	-	95	37.443	ENSGAGG00000024915	SRFBP1	100	37.443	Gopherus_agassizii
ENSCVAG00000013010	-	97	38.967	ENSGGOG00000007725	SRFBP1	99	39.243	Gorilla_gorilla
ENSCVAG00000013010	-	99	37.528	ENSSTOG00000029184	SRFBP1	98	37.557	Ictidomys_tridecemlineatus
ENSCVAG00000013010	-	95	36.973	ENSJJAG00000013229	Srfbp1	100	37.469	Jaculus_jaculus
ENSCVAG00000013010	-	69	55.390	ENSLBEG00000013924	-	58	54.275	Labrus_bergylta
ENSCVAG00000013010	-	52	36.245	ENSLACG00000004456	SRFBP1	59	36.232	Latimeria_chalumnae
ENSCVAG00000013010	-	97	40.315	ENSLOCG00000008772	SRFBP1	99	40.092	Lepisosteus_oculatus
ENSCVAG00000013010	-	97	38.889	ENSLAFG00000015303	SRFBP1	97	40.326	Loxodonta_africana
ENSCVAG00000013010	-	97	39.486	ENSMFAG00000031263	SRFBP1	99	40.235	Macaca_fascicularis
ENSCVAG00000013010	-	97	39.486	ENSMMUG00000021009	SRFBP1	99	40.235	Macaca_mulatta
ENSCVAG00000013010	-	97	39.252	ENSMNEG00000040870	SRFBP1	99	40.000	Macaca_nemestrina
ENSCVAG00000013010	-	83	74.510	ENSMAMG00000004632	-	64	71.429	Mastacembelus_armatus
ENSCVAG00000013010	-	99	67.188	ENSMZEG00005000432	-	76	67.188	Maylandia_zebra
ENSCVAG00000013010	-	97	38.106	ENSMICG00000042923	SRFBP1	99	38.799	Microcebus_murinus
ENSCVAG00000013010	-	97	39.310	ENSMOCG00000006206	Srfbp1	96	39.908	Microtus_ochrogaster
ENSCVAG00000013010	-	98	38.263	ENSMODG00000013487	-	99	39.007	Monodelphis_domestica
ENSCVAG00000013010	-	97	68.000	ENSMALG00000001812	-	76	70.370	Monopterus_albus
ENSCVAG00000013010	-	97	40.371	MGP_CAROLIEiJ_G0022271	Srfbp1	96	39.953	Mus_caroli
ENSCVAG00000013010	-	97	39.583	ENSMUSG00000024528	Srfbp1	96	38.657	Mus_musculus
ENSCVAG00000013010	-	97	38.864	MGP_PahariEiJ_G0019004	Srfbp1	96	39.091	Mus_pahari
ENSCVAG00000013010	-	97	39.636	MGP_SPRETEiJ_G0023184	Srfbp1	96	39.180	Mus_spretus
ENSCVAG00000013010	-	95	39.423	ENSMPUG00000013031	SRFBP1	100	39.423	Mustela_putorius_furo
ENSCVAG00000013010	-	97	38.118	ENSMLUG00000009984	SRFBP1	99	38.626	Myotis_lucifugus
ENSCVAG00000013010	-	99	50.694	ENSNBRG00000001146	-	99	50.694	Neolamprologus_brichardi
ENSCVAG00000013010	-	97	39.437	ENSNLEG00000011949	SRFBP1	99	38.242	Nomascus_leucogenys
ENSCVAG00000013010	-	53	50.000	ENSOPRG00000003881	-	64	50.000	Ochotona_princeps
ENSCVAG00000013010	-	95	36.190	ENSODEG00000007258	SRFBP1	100	35.714	Octodon_degus
ENSCVAG00000013010	-	84	35.696	ENSOANG00000010042	-	98	35.696	Ornithorhynchus_anatinus
ENSCVAG00000013010	-	98	39.636	ENSOCUG00000009556	SRFBP1	100	39.019	Oryctolagus_cuniculus
ENSCVAG00000013010	-	98	68.750	ENSORLG00000014234	-	75	68.750	Oryzias_latipes
ENSCVAG00000013010	-	53	68.794	ENSORLG00020020129	-	76	68.750	Oryzias_latipes_hni
ENSCVAG00000013010	-	97	50.617	ENSORLG00015000238	-	98	50.122	Oryzias_latipes_hsok
ENSCVAG00000013010	-	97	37.150	ENSOGAG00000032423	SRFBP1	98	37.850	Otolemur_garnettii
ENSCVAG00000013010	-	97	39.394	ENSPPAG00000035848	SRFBP1	99	39.627	Pan_paniscus
ENSCVAG00000013010	-	98	39.161	ENSPPRG00000001695	SRFBP1	99	39.161	Panthera_pardus
ENSCVAG00000013010	-	98	39.202	ENSPTIG00000012305	SRFBP1	99	39.202	Panthera_tigris_altaica
ENSCVAG00000013010	-	97	39.578	ENSPTRG00000017172	SRFBP1	99	39.394	Pan_troglodytes
ENSCVAG00000013010	-	97	39.953	ENSPANG00000003799	SRFBP1	99	40.566	Papio_anubis
ENSCVAG00000013010	-	98	38.813	ENSPSIG00000010650	SRFBP1	99	39.041	Pelodiscus_sinensis
ENSCVAG00000013010	-	98	49.639	ENSPMGG00000001675	-	99	49.515	Periophthalmus_magnuspinnatus
ENSCVAG00000013010	-	98	37.619	ENSPCIG00000028532	SRFBP1	93	38.333	Phascolarctos_cinereus
ENSCVAG00000013010	-	98	58.998	ENSPFOG00000005272	-	87	59.226	Poecilia_formosa
ENSCVAG00000013010	-	98	85.185	ENSPLAG00000018282	-	76	77.143	Poecilia_latipinna
ENSCVAG00000013010	-	98	83.333	ENSPMEG00000020184	-	74	84.483	Poecilia_mexicana
ENSCVAG00000013010	-	98	62.470	ENSPREG00000017248	-	99	61.871	Poecilia_reticulata
ENSCVAG00000013010	-	97	39.437	ENSPPYG00000015714	SRFBP1	99	39.202	Pongo_abelii
ENSCVAG00000013010	-	99	38.747	ENSPCOG00000027331	SRFBP1	100	39.030	Propithecus_coquereli
ENSCVAG00000013010	-	99	67.188	ENSPNYG00000010355	-	99	49.412	Pundamilia_nyererei
ENSCVAG00000013010	-	99	36.830	ENSRNOG00000014808	Srfbp1	100	39.198	Rattus_norvegicus
ENSCVAG00000013010	-	96	36.580	ENSRBIG00000031064	SRFBP1	99	37.321	Rhinopithecus_bieti
ENSCVAG00000013010	-	97	38.732	ENSRROG00000026932	SRFBP1	99	39.480	Rhinopithecus_roxellana
ENSCVAG00000013010	-	98	40.141	ENSSBOG00000015464	-	99	41.080	Saimiri_boliviensis_boliviensis
ENSCVAG00000013010	-	98	37.529	ENSSHAG00000016003	SRFBP1	99	38.732	Sarcophilus_harrisii
ENSCVAG00000013010	-	95	88.372	ENSSMAG00000020630	-	74	65.753	Scophthalmus_maximus
ENSCVAG00000013010	-	97	76.923	ENSSDUG00000001828	-	70	76.923	Seriola_dumerili
ENSCVAG00000013010	-	97	37.915	ENSSARG00000010669	SRFBP1	99	38.389	Sorex_araneus
ENSCVAG00000013010	-	96	37.410	ENSSPUG00000009204	SRFBP1	99	36.000	Sphenodon_punctatus
ENSCVAG00000013010	-	98	80.769	ENSSPAG00000010728	-	71	72.581	Stegastes_partitus
ENSCVAG00000013010	-	97	40.281	ENSSSCG00000022656	SRFBP1	99	39.623	Sus_scrofa
ENSCVAG00000013010	-	98	47.541	ENSTNIG00000009267	-	97	49.883	Tetraodon_nigroviridis
ENSCVAG00000013010	-	95	38.795	ENSUAMG00000016707	SRFBP1	100	39.078	Ursus_americanus
ENSCVAG00000013010	-	97	38.847	ENSUMAG00000018340	SRFBP1	100	39.141	Ursus_maritimus
ENSCVAG00000013010	-	98	38.679	ENSVPAG00000005714	SRFBP1	99	38.679	Vicugna_pacos
ENSCVAG00000013010	-	97	40.000	ENSVVUG00000019178	SRFBP1	99	39.765	Vulpes_vulpes
ENSCVAG00000013010	-	96	40.141	ENSXETG00000004681	srfbp1	100	37.744	Xenopus_tropicalis
ENSCVAG00000013010	-	98	74.242	ENSXCOG00000003410	-	86	75.714	Xiphophorus_couchianus
ENSCVAG00000013010	-	98	74.242	ENSXMAG00000026251	-	75	75.714	Xiphophorus_maculatus