EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000013068 (Gene tree)
Gene ID: 107097580
Gene Symbol: -
Alias: -
Full Name: GDNF inducible zinc finger protein 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 6770 bases
Position: chrKL652525.1:673400-680169
Accession: 107097580
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000010891	zf-C2H2	PF00096.26	2.2e-36	1	8
ENSCVAP00000010891	zf-C2H2	PF00096.26	2.2e-36	2	8
ENSCVAP00000010891	zf-C2H2	PF00096.26	2.2e-36	3	8
ENSCVAP00000010891	zf-C2H2	PF00096.26	2.2e-36	4	8
ENSCVAP00000010891	zf-C2H2	PF00096.26	2.2e-36	5	8
ENSCVAP00000010891	zf-C2H2	PF00096.26	2.2e-36	6	8
ENSCVAP00000010891	zf-C2H2	PF00096.26	2.2e-36	7	8
ENSCVAP00000010891	zf-C2H2	PF00096.26	2.2e-36	8	8
ENSCVAP00000010891	zf-met	PF12874.7	7.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000017717	-	4938	XM_015394779	ENSCVAP00000010891	811 (aa)	XP_015250265	UPI0007427E13

Gene Model

Click here to download ENSCVAG00000013068's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000013068's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000013068	-	51	35.714	ENSCVAG00000019764	-	72	42.564
ENSCVAG00000013068	-	52	40.444	ENSCVAG00000023054	-	56	48.503
ENSCVAG00000013068	-	53	34.043	ENSCVAG00000008425	-	66	34.043
ENSCVAG00000013068	-	55	35.102	ENSCVAG00000007026	zbtb47b	58	35.102

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000013068	-	72	67.802	ENSAPOG00000012930	GZF1	95	67.642	Acanthochromis_polyacanthus
ENSCVAG00000013068	-	84	41.783	ENSAMEG00000009853	GZF1	57	51.972	Ailuropoda_melanoleuca
ENSCVAG00000013068	-	97	62.485	ENSACIG00000004753	-	99	60.613	Amphilophus_citrinellus
ENSCVAG00000013068	-	70	68.783	ENSAOCG00000024275	GZF1	92	67.725	Amphiprion_ocellaris
ENSCVAG00000013068	-	99	63.423	ENSAPEG00000017195	GZF1	99	62.780	Amphiprion_percula
ENSCVAG00000013068	-	85	56.923	ENSATEG00000018374	GZF1	88	75.799	Anabas_testudineus
ENSCVAG00000013068	-	97	61.190	ENSACLG00000025866	GZF1	99	60.000	Astatotilapia_calliptera
ENSCVAG00000013068	-	71	50.337	ENSAMXG00000017178	GZF1	81	49.396	Astyanax_mexicanus
ENSCVAG00000013068	-	84	41.712	ENSCJAG00000000733	GZF1	55	56.203	Callithrix_jacchus
ENSCVAG00000013068	-	73	44.888	ENSTSYG00000028054	GZF1	56	53.431	Carlito_syrichta
ENSCVAG00000013068	-	82	41.054	ENSCLAG00000014714	GZF1	52	55.584	Chinchilla_lanigera
ENSCVAG00000013068	-	73	49.688	ENSCPBG00000023418	-	67	48.415	Chrysemys_picta_bellii
ENSCVAG00000013068	-	73	47.068	ENSCPBG00000023415	GZF1	86	47.343	Chrysemys_picta_bellii
ENSCVAG00000013068	-	99	57.801	ENSCSEG00000002270	GZF1	99	57.479	Cynoglossus_semilaevis
ENSCVAG00000013068	-	51	69.000	ENSDORG00000011855	Gzf1	60	68.197	Dipodomys_ordii
ENSCVAG00000013068	-	72	50.274	ENSELUG00000013581	GZF1	88	50.459	Esox_lucius
ENSCVAG00000013068	-	63	57.468	ENSFCAG00000006484	GZF1	72	57.468	Felis_catus
ENSCVAG00000013068	-	96	68.897	ENSFHEG00000020498	GZF1	99	69.145	Fundulus_heteroclitus
ENSCVAG00000013068	-	73	59.701	ENSGMOG00000011017	GZF1	52	79.085	Gadus_morhua
ENSCVAG00000013068	-	99	76.294	ENSGAFG00000008725	GZF1	99	75.933	Gambusia_affinis
ENSCVAG00000013068	-	73	65.404	ENSGACG00000012415	GZF1	99	79.082	Gasterosteus_aculeatus
ENSCVAG00000013068	-	97	61.566	ENSHBUG00000016502	-	99	60.341	Haplochromis_burtoni
ENSCVAG00000013068	-	91	51.807	ENSHCOG00000004326	GZF1	89	51.545	Hippocampus_comes
ENSCVAG00000013068	-	62	58.005	ENSJJAG00000008172	Gzf1	71	58.005	Jaculus_jaculus
ENSCVAG00000013068	-	71	81.053	ENSKMAG00000001453	-	97	81.053	Kryptolebias_marmoratus
ENSCVAG00000013068	-	99	58.824	ENSLBEG00000025803	-	99	58.534	Labrus_bergylta
ENSCVAG00000013068	-	75	47.475	ENSLAFG00000002458	GZF1	72	58.481	Loxodonta_africana
ENSCVAG00000013068	-	96	61.214	ENSMAMG00000011931	-	96	59.264	Mastacembelus_armatus
ENSCVAG00000013068	-	97	61.751	ENSMZEG00005010711	-	99	60.558	Maylandia_zebra
ENSCVAG00000013068	-	95	59.698	ENSMMOG00000004395	-	93	62.670	Mola_mola
ENSCVAG00000013068	-	79	45.291	ENSMODG00000006238	GZF1	100	63.077	Monodelphis_domestica
ENSCVAG00000013068	-	73	46.278	ENSNGAG00000024012	Gzf1	60	68.000	Nannospalax_galili
ENSCVAG00000013068	-	71	60.403	ENSNBRG00000019987	GZF1	100	58.853	Neolamprologus_brichardi
ENSCVAG00000013068	-	64	57.215	ENSNLEG00000011565	GZF1	72	57.215	Nomascus_leucogenys
ENSCVAG00000013068	-	73	47.040	ENSOPRG00000004697	GZF1	86	45.642	Ochotona_princeps
ENSCVAG00000013068	-	73	65.090	ENSONIG00000000989	GZF1	100	63.458	Oreochromis_niloticus
ENSCVAG00000013068	-	52	54.098	ENSOCUG00000025214	GZF1	56	56.313	Oryctolagus_cuniculus
ENSCVAG00000013068	-	98	57.716	ENSORLG00000010006	-	99	56.848	Oryzias_latipes
ENSCVAG00000013068	-	98	57.888	ENSORLG00020001395	-	99	57.143	Oryzias_latipes_hni
ENSCVAG00000013068	-	98	57.195	ENSORLG00015015364	GZF1	99	56.516	Oryzias_latipes_hsok
ENSCVAG00000013068	-	84	42.877	ENSOGAG00000028389	GZF1	56	55.224	Otolemur_garnettii
ENSCVAG00000013068	-	84	43.539	ENSPPAG00000028487	GZF1	55	57.215	Pan_paniscus
ENSCVAG00000013068	-	63	57.468	ENSPPRG00000010040	GZF1	72	57.468	Panthera_pardus
ENSCVAG00000013068	-	63	57.468	ENSPTIG00000019328	GZF1	72	57.468	Panthera_tigris_altaica
ENSCVAG00000013068	-	84	43.315	ENSPTRG00000013320	GZF1	55	57.215	Pan_troglodytes
ENSCVAG00000013068	-	94	46.709	ENSPKIG00000003781	GZF1	59	57.084	Paramormyrops_kingsleyae
ENSCVAG00000013068	-	73	46.667	ENSPSIG00000014455	GZF1	60	70.270	Pelodiscus_sinensis
ENSCVAG00000013068	-	73	50.000	ENSPSIG00000014208	-	59	46.400	Pelodiscus_sinensis
ENSCVAG00000013068	-	78	64.659	ENSPMGG00000003778	-	81	65.217	Periophthalmus_magnuspinnatus
ENSCVAG00000013068	-	84	43.802	ENSPCIG00000013803	GZF1	98	43.906	Phascolarctos_cinereus
ENSCVAG00000013068	-	99	76.179	ENSPFOG00000002393	GZF1	100	79.097	Poecilia_formosa
ENSCVAG00000013068	-	99	72.878	ENSPLAG00000005232	GZF1	94	78.689	Poecilia_latipinna
ENSCVAG00000013068	-	99	73.292	ENSPMEG00000020017	-	99	71.636	Poecilia_mexicana
ENSCVAG00000013068	-	99	67.758	ENSPREG00000016398	GZF1	99	66.788	Poecilia_reticulata
ENSCVAG00000013068	-	63	55.949	ENSPPYG00000010766	GZF1	82	55.949	Pongo_abelii
ENSCVAG00000013068	-	84	44.784	ENSPVAG00000014056	GZF1	98	43.933	Pteropus_vampyrus
ENSCVAG00000013068	-	61	66.667	ENSPNYG00000000788	-	82	63.717	Pundamilia_nyererei
ENSCVAG00000013068	-	84	41.370	ENSSBOG00000018893	GZF1	55	55.949	Saimiri_boliviensis_boliviensis
ENSCVAG00000013068	-	84	43.132	ENSSHAG00000009367	GZF1	59	54.206	Sarcophilus_harrisii
ENSCVAG00000013068	-	93	45.581	ENSSFOG00015008631	gzf1	54	57.143	Scleropages_formosus
ENSCVAG00000013068	-	99	62.915	ENSSDUG00000008186	GZF1	99	60.282	Seriola_dumerili
ENSCVAG00000013068	-	99	62.217	ENSSLDG00000002382	GZF1	99	61.483	Seriola_lalandi_dorsalis
ENSCVAG00000013068	-	59	62.319	ENSSARG00000010285	GZF1	64	62.319	Sorex_araneus
ENSCVAG00000013068	-	85	39.474	ENSSPUG00000004147	GZF1	99	41.272	Sphenodon_punctatus
ENSCVAG00000013068	-	99	65.434	ENSSPAG00000011759	GZF1	99	65.666	Stegastes_partitus
ENSCVAG00000013068	-	98	55.556	ENSTRUG00000006128	-	98	55.301	Takifugu_rubripes
ENSCVAG00000013068	-	73	61.818	ENSTNIG00000010722	GZF1	100	60.199	Tetraodon_nigroviridis
ENSCVAG00000013068	-	76	45.732	ENSTTRG00000011345	GZF1	86	46.445	Tursiops_truncatus
ENSCVAG00000013068	-	84	43.232	ENSUMAG00000004065	GZF1	57	56.047	Ursus_maritimus
ENSCVAG00000013068	-	99	76.156	ENSXMAG00000023249	GZF1	100	75.061	Xiphophorus_maculatus