EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000013288 (Gene tree)
Gene ID: 107099508
Gene Symbol: zgc:123010
Alias: fk11h08|wu:fk11h08
Full Name: tetratricopeptide repeat protein 31-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 12098 bases
Position: chrKL652501.1:3540407-3552504
Accession: 107099508
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000027178	RRM_1	PF00076.22	3.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000017955	-	3588	XM_015397698	ENSCVAP00000027178	515 (aa)	XP_015253184	UPI000742867A

Gene Model

Click here to download ENSCVAG00000013288's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000013288's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000013288	zgc:123010	52	39.423	ENSCVAG00000004187	-	68	37.838
ENSCVAG00000013288	zgc:123010	65	32.570	ENSCVAG00000006564	-	61	32.057

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000013288	zgc:123010	100	86.100	ENSAPOG00000019633	zgc:123010	100	86.100	Acanthochromis_polyacanthus
ENSCVAG00000013288	zgc:123010	63	34.293	ENSAPOG00000005058	si:dkey-33c12.4	56	33.770	Acanthochromis_polyacanthus
ENSCVAG00000013288	zgc:123010	77	51.870	ENSAPOG00000001034	-	81	56.140	Acanthochromis_polyacanthus
ENSCVAG00000013288	zgc:123010	69	85.070	ENSACIG00000021684	zgc:123010	89	85.070	Amphilophus_citrinellus
ENSCVAG00000013288	zgc:123010	52	39.241	ENSAOCG00000000431	-	51	32.836	Amphiprion_ocellaris
ENSCVAG00000013288	zgc:123010	100	86.100	ENSAOCG00000005910	zgc:123010	100	86.100	Amphiprion_ocellaris
ENSCVAG00000013288	zgc:123010	63	34.293	ENSAOCG00000020066	si:dkey-33c12.4	54	33.770	Amphiprion_ocellaris
ENSCVAG00000013288	zgc:123010	100	86.293	ENSAPEG00000014305	zgc:123010	100	86.293	Amphiprion_percula
ENSCVAG00000013288	zgc:123010	100	79.923	ENSATEG00000001220	zgc:123010	100	82.239	Anabas_testudineus
ENSCVAG00000013288	zgc:123010	65	33.419	ENSATEG00000018885	si:dkey-33c12.4	58	33.933	Anabas_testudineus
ENSCVAG00000013288	zgc:123010	99	49.615	ENSATEG00000022160	-	100	49.427	Anabas_testudineus
ENSCVAG00000013288	zgc:123010	100	81.310	ENSACLG00000010188	zgc:123010	100	81.310	Astatotilapia_calliptera
ENSCVAG00000013288	zgc:123010	99	51.316	ENSACLG00000012346	-	100	50.940	Astatotilapia_calliptera
ENSCVAG00000013288	zgc:123010	100	64.007	ENSAMXG00000041967	zgc:123010	100	64.750	Astyanax_mexicanus
ENSCVAG00000013288	zgc:123010	68	33.254	ENSAMXG00000010871	si:dkey-33c12.4	64	34.211	Astyanax_mexicanus
ENSCVAG00000013288	zgc:123010	61	33.607	ENSCPBG00000024454	-	61	33.333	Chrysemys_picta_bellii
ENSCVAG00000013288	zgc:123010	80	76.386	ENSCSEG00000006468	zgc:123010	67	75.422	Cynoglossus_semilaevis
ENSCVAG00000013288	zgc:123010	86	32.677	ENSDARG00000057890	si:dkey-33c12.4	72	33.475	Danio_rerio
ENSCVAG00000013288	zgc:123010	72	70.241	ENSDARG00000039082	zgc:123010	98	63.918	Danio_rerio
ENSCVAG00000013288	zgc:123010	62	36.441	ENSEBUG00000001368	-	59	36.723	Eptatretus_burgeri
ENSCVAG00000013288	zgc:123010	100	66.092	ENSELUG00000022008	zgc:123010	100	66.476	Esox_lucius
ENSCVAG00000013288	zgc:123010	68	31.915	ENSELUG00000001633	-	64	31.915	Esox_lucius
ENSCVAG00000013288	zgc:123010	89	30.755	ENSELUG00000002009	si:dkey-33c12.4	88	34.069	Esox_lucius
ENSCVAG00000013288	zgc:123010	75	59.033	ENSELUG00000021447	-	100	53.817	Esox_lucius
ENSCVAG00000013288	zgc:123010	65	33.077	ENSFHEG00000005521	si:dkey-33c12.4	63	31.925	Fundulus_heteroclitus
ENSCVAG00000013288	zgc:123010	100	91.473	ENSFHEG00000002306	zgc:123010	100	91.473	Fundulus_heteroclitus
ENSCVAG00000013288	zgc:123010	72	79.412	ENSGMOG00000018473	zgc:123010	100	79.412	Gadus_morhua
ENSCVAG00000013288	zgc:123010	51	35.000	ENSGALG00000036747	TTC31	57	35.000	Gallus_gallus
ENSCVAG00000013288	zgc:123010	59	40.000	ENSGAFG00000017596	si:dkey-33c12.4	65	30.405	Gambusia_affinis
ENSCVAG00000013288	zgc:123010	100	92.636	ENSGAFG00000009373	zgc:123010	100	92.636	Gambusia_affinis
ENSCVAG00000013288	zgc:123010	72	84.718	ENSGACG00000007620	zgc:123010	100	84.718	Gasterosteus_aculeatus
ENSCVAG00000013288	zgc:123010	63	37.117	ENSGACG00000004936	-	97	37.423	Gasterosteus_aculeatus
ENSCVAG00000013288	zgc:123010	99	51.607	ENSHBUG00000016720	-	100	51.229	Haplochromis_burtoni
ENSCVAG00000013288	zgc:123010	85	31.818	ENSIPUG00000005998	si:dkey-33c12.4	64	34.709	Ictalurus_punctatus
ENSCVAG00000013288	zgc:123010	100	84.942	ENSKMAG00000021350	zgc:123010	100	84.942	Kryptolebias_marmoratus
ENSCVAG00000013288	zgc:123010	63	31.926	ENSKMAG00000016610	si:dkey-33c12.4	57	32.718	Kryptolebias_marmoratus
ENSCVAG00000013288	zgc:123010	60	30.769	ENSLBEG00000021088	-	55	31.044	Labrus_bergylta
ENSCVAG00000013288	zgc:123010	99	52.611	ENSLBEG00000013518	-	100	51.440	Labrus_bergylta
ENSCVAG00000013288	zgc:123010	100	82.398	ENSLBEG00000023984	zgc:123010	100	82.398	Labrus_bergylta
ENSCVAG00000013288	zgc:123010	90	31.478	ENSLACG00000004602	-	72	34.307	Latimeria_chalumnae
ENSCVAG00000013288	zgc:123010	69	59.280	ENSLACG00000009001	zgc:123010	79	59.280	Latimeria_chalumnae
ENSCVAG00000013288	zgc:123010	100	57.774	ENSLOCG00000008967	zgc:123010	100	58.349	Lepisosteus_oculatus
ENSCVAG00000013288	zgc:123010	76	32.906	ENSLOCG00000001861	-	71	32.189	Lepisosteus_oculatus
ENSCVAG00000013288	zgc:123010	69	60.167	ENSMAMG00000002460	-	86	60.167	Mastacembelus_armatus
ENSCVAG00000013288	zgc:123010	64	56.932	ENSMAMG00000003394	-	91	56.932	Mastacembelus_armatus
ENSCVAG00000013288	zgc:123010	69	60.167	ENSMAMG00000002377	-	82	60.167	Mastacembelus_armatus
ENSCVAG00000013288	zgc:123010	72	78.437	ENSMAMG00000001145	zgc:123010	89	78.437	Mastacembelus_armatus
ENSCVAG00000013288	zgc:123010	64	58.084	ENSMAMG00000003439	-	97	55.525	Mastacembelus_armatus
ENSCVAG00000013288	zgc:123010	63	33.858	ENSMAMG00000000111	si:dkey-33c12.4	57	33.858	Mastacembelus_armatus
ENSCVAG00000013288	zgc:123010	100	81.310	ENSMZEG00005027733	zgc:123010	100	81.310	Maylandia_zebra
ENSCVAG00000013288	zgc:123010	73	55.297	ENSMZEG00005014740	-	95	55.297	Maylandia_zebra
ENSCVAG00000013288	zgc:123010	91	73.191	ENSMMOG00000010544	zgc:123010	100	75.372	Mola_mola
ENSCVAG00000013288	zgc:123010	68	53.039	ENSMMOG00000017955	-	86	53.039	Mola_mola
ENSCVAG00000013288	zgc:123010	100	80.695	ENSMALG00000017698	zgc:123010	100	80.695	Monopterus_albus
ENSCVAG00000013288	zgc:123010	60	32.418	ENSMALG00000002265	si:dkey-33c12.4	60	31.282	Monopterus_albus
ENSCVAG00000013288	zgc:123010	94	69.877	ENSNBRG00000021157	zgc:123010	100	69.877	Neolamprologus_brichardi
ENSCVAG00000013288	zgc:123010	94	79.513	ENSONIG00000018353	zgc:123010	100	79.513	Oreochromis_niloticus
ENSCVAG00000013288	zgc:123010	52	39.109	ENSONIG00000007538	-	98	38.521	Oreochromis_niloticus
ENSCVAG00000013288	zgc:123010	57	58.609	ENSONIG00000000297	-	100	58.609	Oreochromis_niloticus
ENSCVAG00000013288	zgc:123010	59	37.294	ENSONIG00000012263	-	99	36.923	Oreochromis_niloticus
ENSCVAG00000013288	zgc:123010	91	79.325	ENSORLG00000007675	zgc:123010	100	79.325	Oryzias_latipes
ENSCVAG00000013288	zgc:123010	76	34.177	ENSORLG00000030385	-	58	30.986	Oryzias_latipes
ENSCVAG00000013288	zgc:123010	63	30.729	ENSORLG00000029651	si:dkey-33c12.4	60	31.429	Oryzias_latipes
ENSCVAG00000013288	zgc:123010	63	30.649	ENSORLG00020008750	si:dkey-33c12.4	65	30.023	Oryzias_latipes_hni
ENSCVAG00000013288	zgc:123010	91	79.114	ENSORLG00020003457	zgc:123010	100	79.114	Oryzias_latipes_hni
ENSCVAG00000013288	zgc:123010	100	80.851	ENSORLG00015008373	zgc:123010	100	80.851	Oryzias_latipes_hsok
ENSCVAG00000013288	zgc:123010	76	30.297	ENSORLG00015008400	-	58	30.899	Oryzias_latipes_hsok
ENSCVAG00000013288	zgc:123010	100	82.432	ENSOMEG00000003408	zgc:123010	100	82.432	Oryzias_melastigma
ENSCVAG00000013288	zgc:123010	63	30.628	ENSOMEG00000008913	-	56	30.971	Oryzias_melastigma
ENSCVAG00000013288	zgc:123010	76	35.897	ENSOMEG00000009428	-	50	38.494	Oryzias_melastigma
ENSCVAG00000013288	zgc:123010	100	53.920	ENSPKIG00000015521	zgc:123010	99	56.809	Paramormyrops_kingsleyae
ENSCVAG00000013288	zgc:123010	91	31.530	ENSPKIG00000011819	-	61	34.328	Paramormyrops_kingsleyae
ENSCVAG00000013288	zgc:123010	81	66.271	ENSPMGG00000020251	zgc:123010	89	67.506	Periophthalmus_magnuspinnatus
ENSCVAG00000013288	zgc:123010	57	46.918	ENSPMAG00000004544	zgc:123010	100	46.918	Petromyzon_marinus
ENSCVAG00000013288	zgc:123010	100	92.829	ENSPFOG00000001073	zgc:123010	100	92.829	Poecilia_formosa
ENSCVAG00000013288	zgc:123010	63	31.865	ENSPFOG00000009143	si:dkey-33c12.4	56	31.865	Poecilia_formosa
ENSCVAG00000013288	zgc:123010	51	38.265	ENSPFOG00000017092	-	73	31.356	Poecilia_formosa
ENSCVAG00000013288	zgc:123010	63	31.606	ENSPLAG00000022537	si:dkey-33c12.4	58	31.606	Poecilia_latipinna
ENSCVAG00000013288	zgc:123010	100	93.217	ENSPLAG00000007711	zgc:123010	100	93.217	Poecilia_latipinna
ENSCVAG00000013288	zgc:123010	100	92.829	ENSPMEG00000005092	zgc:123010	100	92.829	Poecilia_mexicana
ENSCVAG00000013288	zgc:123010	51	38.776	ENSPMEG00000009905	-	67	34.579	Poecilia_mexicana
ENSCVAG00000013288	zgc:123010	63	31.865	ENSPMEG00000015590	si:dkey-33c12.4	56	32.124	Poecilia_mexicana
ENSCVAG00000013288	zgc:123010	69	82.254	ENSPREG00000019587	zgc:123010	79	82.254	Poecilia_reticulata
ENSCVAG00000013288	zgc:123010	69	53.846	ENSPNYG00000023304	-	96	49.296	Pundamilia_nyererei
ENSCVAG00000013288	zgc:123010	100	81.467	ENSPNYG00000007893	zgc:123010	100	81.467	Pundamilia_nyererei
ENSCVAG00000013288	zgc:123010	100	66.731	ENSPNAG00000007579	zgc:123010	100	67.692	Pygocentrus_nattereri
ENSCVAG00000013288	zgc:123010	67	32.108	ENSPNAG00000018386	si:dkey-33c12.4	63	32.598	Pygocentrus_nattereri
ENSCVAG00000013288	zgc:123010	100	57.576	ENSSFOG00015021394	zgc:123010	99	56.818	Scleropages_formosus
ENSCVAG00000013288	zgc:123010	67	34.896	ENSSFOG00015005186	-	65	35.000	Scleropages_formosus
ENSCVAG00000013288	zgc:123010	71	56.216	ENSSMAG00000021096	-	97	49.808	Scophthalmus_maximus
ENSCVAG00000013288	zgc:123010	60	30.728	ENSSMAG00000008147	si:dkey-33c12.4	57	30.591	Scophthalmus_maximus
ENSCVAG00000013288	zgc:123010	100	81.346	ENSSMAG00000002904	zgc:123010	100	81.346	Scophthalmus_maximus
ENSCVAG00000013288	zgc:123010	99	55.449	ENSSDUG00000014026	-	100	55.703	Seriola_dumerili
ENSCVAG00000013288	zgc:123010	50	31.532	ENSSDUG00000010976	-	54	31.532	Seriola_dumerili
ENSCVAG00000013288	zgc:123010	100	85.714	ENSSDUG00000008651	zgc:123010	100	85.714	Seriola_dumerili
ENSCVAG00000013288	zgc:123010	65	33.077	ENSSDUG00000003213	si:dkey-33c12.4	62	33.162	Seriola_dumerili
ENSCVAG00000013288	zgc:123010	100	85.521	ENSSLDG00000019386	zgc:123010	100	85.521	Seriola_lalandi_dorsalis
ENSCVAG00000013288	zgc:123010	50	31.231	ENSSLDG00000012846	-	56	31.231	Seriola_lalandi_dorsalis
ENSCVAG00000013288	zgc:123010	64	32.905	ENSSLDG00000009448	si:dkey-33c12.4	53	34.078	Seriola_lalandi_dorsalis
ENSCVAG00000013288	zgc:123010	60	34.254	ENSSPAG00000022577	-	53	34.254	Stegastes_partitus
ENSCVAG00000013288	zgc:123010	100	82.819	ENSSPAG00000013621	zgc:123010	100	85.328	Stegastes_partitus
ENSCVAG00000013288	zgc:123010	52	35.439	ENSTRUG00000000057	-	60	35.202	Takifugu_rubripes
ENSCVAG00000013288	zgc:123010	100	69.498	ENSTRUG00000024824	zgc:123010	100	69.884	Takifugu_rubripes
ENSCVAG00000013288	zgc:123010	59	32.022	ENSTRUG00000022374	si:dkey-33c12.4	51	31.742	Takifugu_rubripes
ENSCVAG00000013288	zgc:123010	63	72.340	ENSTNIG00000001303	zgc:123010	100	72.340	Tetraodon_nigroviridis
ENSCVAG00000013288	zgc:123010	63	35.366	ENSTNIG00000010542	-	99	35.671	Tetraodon_nigroviridis
ENSCVAG00000013288	zgc:123010	58	53.020	ENSXETG00000033896	-	99	53.020	Xenopus_tropicalis
ENSCVAG00000013288	zgc:123010	74	80.402	ENSXCOG00000012281	zgc:123010	91	80.402	Xiphophorus_couchianus
ENSCVAG00000013288	zgc:123010	100	91.876	ENSXMAG00000002598	zgc:123010	100	91.683	Xiphophorus_maculatus