EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000013374 (Gene tree)
Gene ID: 107084746
Gene Symbol: -
Alias: -
Full Name: ADP-ribosylation factor 1-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 10509 bases
Position: chrKL652608.1:1476531-1487039
Accession: 107084746
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000011155	MMR_HSR1	PF01926.23	3.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000018048	-	3112	XM_015374742	ENSCVAP00000011155	180 (aa)	XP_015230228	UPI000293BBB7

Gene Model

Click here to download ENSCVAG00000013374's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000013374's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000013374	-	97	83.908	ENSCVAG00000009124	ARF5	97	83.908
ENSCVAG00000013374	-	92	45.349	ENSCVAG00000004305	arl4aa	86	45.349
ENSCVAG00000013374	-	99	91.061	ENSCVAG00000021619	-	99	91.061
ENSCVAG00000013374	-	88	47.879	ENSCVAG00000023139	-	85	47.879
ENSCVAG00000013374	-	79	34.483	ENSCVAG00000015162	sar1ab	73	34.483
ENSCVAG00000013374	-	92	44.578	ENSCVAG00000019595	arl11	97	44.578
ENSCVAG00000013374	-	98	48.864	ENSCVAG00000012706	arl5c	98	48.864
ENSCVAG00000013374	-	96	48.555	ENSCVAG00000008445	arl2	93	48.555
ENSCVAG00000013374	-	100	92.265	ENSCVAG00000001271	arf3b	100	92.265
ENSCVAG00000013374	-	90	33.333	ENSCVAG00000001545	arl13b	68	33.333
ENSCVAG00000013374	-	90	46.296	ENSCVAG00000016797	-	89	46.296
ENSCVAG00000013374	-	87	31.847	ENSCVAG00000005239	ARL8B	95	31.847
ENSCVAG00000013374	-	100	41.848	ENSCVAG00000015183	ARL6	99	41.848
ENSCVAG00000013374	-	97	82.184	ENSCVAG00000011381	-	97	82.184
ENSCVAG00000013374	-	97	83.908	ENSCVAG00000007314	-	97	83.908
ENSCVAG00000013374	-	96	46.629	ENSCVAG00000020902	arl4cb	91	46.629
ENSCVAG00000013374	-	92	33.735	ENSCVAG00000020378	arl8ba	89	33.735
ENSCVAG00000013374	-	93	44.910	ENSCVAG00000010611	arl3l2	89	44.910
ENSCVAG00000013374	-	100	92.818	ENSCVAG00000000745	arf2b	100	92.818
ENSCVAG00000013374	-	92	46.386	ENSCVAG00000021960	arl3	91	46.386
ENSCVAG00000013374	-	94	31.492	ENSCVAG00000006500	-	91	31.492
ENSCVAG00000013374	-	99	91.061	ENSCVAG00000018314	-	99	91.061
ENSCVAG00000013374	-	88	30.994	ENSCVAG00000004221	srprb	64	30.994
ENSCVAG00000013374	-	97	49.143	ENSCVAG00000006913	arl8	98	49.143
ENSCVAG00000013374	-	100	92.265	ENSCVAG00000013760	-	88	92.265
ENSCVAG00000013374	-	77	65.217	ENSCVAG00000013902	-	84	65.217
ENSCVAG00000013374	-	78	36.875	ENSCVAG00000016249	ARL6	84	36.875
ENSCVAG00000013374	-	98	59.322	ENSCVAG00000001731	arl1	98	59.322
ENSCVAG00000013374	-	97	51.149	ENSCVAG00000020833	ARL5A	97	51.149

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000013374	-	100	96.111	ENSACIG00000012192	-	100	96.111	Amphilophus_citrinellus
ENSCVAG00000013374	-	84	98.013	ENSAOCG00000001275	-	88	98.013	Amphiprion_ocellaris
ENSCVAG00000013374	-	100	97.778	ENSAPEG00000016909	-	100	97.778	Amphiprion_percula
ENSCVAG00000013374	-	100	98.333	ENSATEG00000003174	-	100	98.333	Anabas_testudineus
ENSCVAG00000013374	-	100	96.111	ENSACLG00000004123	-	100	96.111	Astatotilapia_calliptera
ENSCVAG00000013374	-	100	92.818	ENSAMXG00000019845	arf1	100	92.818	Astyanax_mexicanus
ENSCVAG00000013374	-	100	92.818	ENSDARG00000009484	arf1	100	92.818	Danio_rerio
ENSCVAG00000013374	-	100	93.370	ENSELUG00000022533	arf1	79	93.370	Esox_lucius
ENSCVAG00000013374	-	100	99.444	ENSFHEG00000005859	-	100	99.444	Fundulus_heteroclitus
ENSCVAG00000013374	-	96	88.439	ENSGMOG00000000429	arf1	95	88.439	Gadus_morhua
ENSCVAG00000013374	-	100	100.000	ENSGAFG00000018151	-	100	100.000	Gambusia_affinis
ENSCVAG00000013374	-	100	86.667	ENSGACG00000014195	-	97	86.667	Gasterosteus_aculeatus
ENSCVAG00000013374	-	100	96.111	ENSHBUG00000002636	-	100	96.111	Haplochromis_burtoni
ENSCVAG00000013374	-	100	92.265	ENSIPUG00000006311	arf1	100	92.265	Ictalurus_punctatus
ENSCVAG00000013374	-	100	95.000	ENSKMAG00000018315	-	100	95.000	Kryptolebias_marmoratus
ENSCVAG00000013374	-	99	88.764	ENSLBEG00000023263	-	98	88.764	Labrus_bergylta
ENSCVAG00000013374	-	99	89.385	ENSLBEG00000001998	arf1	99	89.385	Labrus_bergylta
ENSCVAG00000013374	-	100	98.333	ENSMAMG00000001553	-	100	98.333	Mastacembelus_armatus
ENSCVAG00000013374	-	100	96.111	ENSMZEG00005022594	-	100	96.111	Maylandia_zebra
ENSCVAG00000013374	-	100	97.778	ENSMALG00000004269	-	100	97.778	Monopterus_albus
ENSCVAG00000013374	-	100	96.111	ENSNBRG00000016455	-	100	96.111	Neolamprologus_brichardi
ENSCVAG00000013374	-	100	96.111	ENSONIG00000001286	-	100	96.111	Oreochromis_niloticus
ENSCVAG00000013374	-	100	97.222	ENSORLG00000023270	-	100	97.222	Oryzias_latipes
ENSCVAG00000013374	-	100	96.667	ENSORLG00020006712	-	100	96.667	Oryzias_latipes_hni
ENSCVAG00000013374	-	100	97.222	ENSORLG00015019836	-	100	97.222	Oryzias_latipes_hsok
ENSCVAG00000013374	-	100	97.222	ENSOMEG00000023784	-	100	97.222	Oryzias_melastigma
ENSCVAG00000013374	-	100	88.950	ENSPMGG00000014174	arf1	98	91.176	Periophthalmus_magnuspinnatus
ENSCVAG00000013374	-	100	92.778	ENSPMAG00000002035	arf1	100	92.778	Petromyzon_marinus
ENSCVAG00000013374	-	100	100.000	ENSPFOG00000014787	-	100	100.000	Poecilia_formosa
ENSCVAG00000013374	-	100	100.000	ENSPLAG00000001041	-	100	100.000	Poecilia_latipinna
ENSCVAG00000013374	-	100	100.000	ENSPMEG00000024077	-	100	100.000	Poecilia_mexicana
ENSCVAG00000013374	-	100	100.000	ENSPREG00000009009	-	100	100.000	Poecilia_reticulata
ENSCVAG00000013374	-	100	96.111	ENSPNYG00000009472	-	100	96.111	Pundamilia_nyererei
ENSCVAG00000013374	-	94	95.266	ENSPNAG00000000098	arf1	93	95.266	Pygocentrus_nattereri
ENSCVAG00000013374	-	99	76.667	YDL192W	-	99	76.667	Saccharomyces_cerevisiae
ENSCVAG00000013374	-	99	75.978	YDL137W	-	99	75.978	Saccharomyces_cerevisiae
ENSCVAG00000013374	-	100	91.111	ENSSMAG00000006125	-	100	91.111	Scophthalmus_maximus
ENSCVAG00000013374	-	100	97.222	ENSSDUG00000017356	-	100	97.222	Seriola_dumerili
ENSCVAG00000013374	-	100	97.222	ENSSLDG00000008504	-	100	97.222	Seriola_lalandi_dorsalis
ENSCVAG00000013374	-	100	98.333	ENSSPAG00000011431	-	100	98.333	Stegastes_partitus
ENSCVAG00000013374	-	100	95.000	ENSTRUG00000019870	-	100	95.000	Takifugu_rubripes
ENSCVAG00000013374	-	100	93.333	ENSTNIG00000011685	-	100	93.333	Tetraodon_nigroviridis
ENSCVAG00000013374	-	100	100.000	ENSXCOG00000016687	-	98	100.000	Xiphophorus_couchianus
ENSCVAG00000013374	-	100	100.000	ENSXMAG00000009193	-	100	100.000	Xiphophorus_maculatus