EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000013477 (Gene tree)
Gene ID: 107084732
Gene Symbol: gpatch8
Alias: fa12a04|fb30h12|gpatc8|wu:fa12a04|wu:fb30h12|wu:fj32a09
Full Name: G-patch domain containing 8
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 25146 bases
Position: chrKL652608.1:1421150-1446295
Accession: 107084732
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000027285	zf-C2H2_jaz	PF12171.8	5e-06	1	1
ENSCVAP00000011234	zf-C2H2_jaz	PF12171.8	5.3e-06	1	1
ENSCVAP00000011234	G-patch	PF01585.23	1.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000029868	-	5696	XM_015374704	ENSCVAP00000011234	1490 (aa)	XP_015230190	UPI000742A3A7
ENSCVAT00000018142	-	6334	XM_015374705	ENSCVAP00000027285	1411 (aa)	XP_015230191	UPI0007425271

Gene Model

Click here to download ENSCVAG00000013477's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000013477's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000013477	gpatch8	100	84.288	ENSAPOG00000023938	gpatch8	100	84.323	Acanthochromis_polyacanthus
ENSCVAG00000013477	gpatch8	100	83.112	ENSACIG00000012241	gpatch8	100	82.102	Amphilophus_citrinellus
ENSCVAG00000013477	gpatch8	100	84.554	ENSAOCG00000018102	gpatch8	100	84.390	Amphiprion_ocellaris
ENSCVAG00000013477	gpatch8	100	84.421	ENSAPEG00000016776	gpatch8	100	84.256	Amphiprion_percula
ENSCVAG00000013477	gpatch8	100	80.240	ENSATEG00000003247	gpatch8	55	73.381	Anabas_testudineus
ENSCVAG00000013477	gpatch8	100	82.577	ENSACLG00000004165	gpatch8	100	82.443	Astatotilapia_calliptera
ENSCVAG00000013477	gpatch8	100	78.472	ENSCSEG00000021277	gpatch8	100	78.000	Cynoglossus_semilaevis
ENSCVAG00000013477	gpatch8	100	63.312	ENSDARG00000059768	gpatch8	56	61.047	Danio_rerio
ENSCVAG00000013477	gpatch8	61	63.627	ENSELUG00000019920	gpatch8	57	64.073	Esox_lucius
ENSCVAG00000013477	gpatch8	100	84.990	ENSFHEG00000005791	gpatch8	100	85.400	Fundulus_heteroclitus
ENSCVAG00000013477	gpatch8	100	88.822	ENSGAFG00000018138	gpatch8	100	88.889	Gambusia_affinis
ENSCVAG00000013477	gpatch8	100	82.079	ENSHBUG00000002669	gpatch8	100	82.278	Haplochromis_burtoni
ENSCVAG00000013477	gpatch8	76	60.630	ENSHGLG00100010738	GPATCH8	88	56.661	Heterocephalus_glaber_male
ENSCVAG00000013477	gpatch8	100	72.921	ENSHCOG00000017518	gpatch8	95	70.868	Hippocampus_comes
ENSCVAG00000013477	gpatch8	59	59.935	ENSIPUG00000015431	gpatch8	55	59.207	Ictalurus_punctatus
ENSCVAG00000013477	gpatch8	100	79.561	ENSLBEG00000023352	gpatch8	100	79.427	Labrus_bergylta
ENSCVAG00000013477	gpatch8	61	81.897	ENSLOCG00000012265	gpatch8	70	76.596	Lepisosteus_oculatus
ENSCVAG00000013477	gpatch8	100	81.831	ENSMAMG00000001618	gpatch8	100	81.831	Mastacembelus_armatus
ENSCVAG00000013477	gpatch8	100	82.577	ENSMZEG00005022584	gpatch8	100	82.443	Maylandia_zebra
ENSCVAG00000013477	gpatch8	61	77.149	ENSMMOG00000020472	gpatch8	55	75.149	Mola_mola
ENSCVAG00000013477	gpatch8	100	79.667	ENSMALG00000004204	gpatch8	100	79.480	Monopterus_albus
ENSCVAG00000013477	gpatch8	50	63.006	ENSMLUG00000013840	GPATCH8	53	63.905	Myotis_lucifugus
ENSCVAG00000013477	gpatch8	100	82.545	ENSNBRG00000016402	gpatch8	100	82.345	Neolamprologus_brichardi
ENSCVAG00000013477	gpatch8	100	79.627	ENSONIG00000001292	gpatch8	100	81.187	Oreochromis_niloticus
ENSCVAG00000013477	gpatch8	61	75.896	ENSORLG00000028497	gpatch8	56	74.374	Oryzias_latipes
ENSCVAG00000013477	gpatch8	61	75.543	ENSORLG00020006656	gpatch8	56	74.105	Oryzias_latipes_hni
ENSCVAG00000013477	gpatch8	61	76.004	ENSORLG00015019797	gpatch8	56	74.493	Oryzias_latipes_hsok
ENSCVAG00000013477	gpatch8	61	52.335	ENSPKIG00000018753	gpatch8	56	55.052	Paramormyrops_kingsleyae
ENSCVAG00000013477	gpatch8	100	75.232	ENSPMGG00000000730	gpatch8	99	75.880	Periophthalmus_magnuspinnatus
ENSCVAG00000013477	gpatch8	100	88.436	ENSPFOG00000014833	gpatch8	100	88.703	Poecilia_formosa
ENSCVAG00000013477	gpatch8	100	88.302	ENSPLAG00000001035	gpatch8	100	88.503	Poecilia_latipinna
ENSCVAG00000013477	gpatch8	100	88.636	ENSPMEG00000024032	gpatch8	100	88.503	Poecilia_mexicana
ENSCVAG00000013477	gpatch8	100	88.570	ENSPREG00000008911	gpatch8	100	88.503	Poecilia_reticulata
ENSCVAG00000013477	gpatch8	100	82.710	ENSPNYG00000009426	gpatch8	100	82.577	Pundamilia_nyererei
ENSCVAG00000013477	gpatch8	59	63.666	ENSPNAG00000016200	gpatch8	58	63.031	Pygocentrus_nattereri
ENSCVAG00000013477	gpatch8	56	55.336	ENSSFOG00015004299	GPATCH8	53	52.569	Scleropages_formosus
ENSCVAG00000013477	gpatch8	100	82.103	ENSSDUG00000018065	gpatch8	100	82.300	Seriola_dumerili
ENSCVAG00000013477	gpatch8	100	83.533	ENSSLDG00000009225	gpatch8	100	83.665	Seriola_lalandi_dorsalis
ENSCVAG00000013477	gpatch8	100	83.989	ENSSPAG00000011368	gpatch8	100	84.056	Stegastes_partitus
ENSCVAG00000013477	gpatch8	100	76.541	ENSTRUG00000020474	gpatch8	100	75.631	Takifugu_rubripes
ENSCVAG00000013477	gpatch8	56	64.729	ENSTBEG00000009486	GPATCH8	54	64.341	Tupaia_belangeri
ENSCVAG00000013477	gpatch8	100	88.075	ENSXCOG00000016680	gpatch8	100	87.275	Xiphophorus_couchianus
ENSCVAG00000013477	gpatch8	100	88.259	ENSXMAG00000009217	gpatch8	100	87.658	Xiphophorus_maculatus