EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000013534 (Gene tree)
Gene ID: 107101259
Gene Symbol: tent5bb
Alias: fam46bb|si:dkey-181o6.1
Full Name: protein FAM46A-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 17883 bases
Position: chrKL653571.1:64154-82036
Accession: 107101259
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000027296	NTP_transf_7	PF07984.12	1.1e-157	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000029927	-	4344	XM_015400107	ENSCVAP00000027296	392 (aa)	XP_015255593	UPI0007428993

Gene Model

Click here to download ENSCVAG00000013534's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000013534's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000013534	tent5bb	91	66.947	ENSCVAG00000014761	tent5c	92	66.947
ENSCVAG00000013534	tent5bb	93	61.475	ENSCVAG00000021677	tent5d	94	61.475
ENSCVAG00000013534	tent5bb	87	83.673	ENSCVAG00000020190	tent5ba	86	83.673
ENSCVAG00000013534	tent5bb	99	71.684	ENSCVAG00000023355	TENT5A	98	71.684
ENSCVAG00000013534	tent5bb	93	60.533	ENSCVAG00000006666	TENT5D	94	60.533
ENSCVAG00000013534	tent5bb	99	68.069	ENSCVAG00000004125	tent5ab	97	68.069

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000013534	tent5bb	97	83.333	ENSAPOG00000001189	tent5ba	99	83.333	Acanthochromis_polyacanthus
ENSCVAG00000013534	tent5bb	100	91.349	ENSAPOG00000013301	tent5bb	100	91.349	Acanthochromis_polyacanthus
ENSCVAG00000013534	tent5bb	100	90.840	ENSACIG00000020894	tent5bb	100	90.840	Amphilophus_citrinellus
ENSCVAG00000013534	tent5bb	69	83.643	ENSACIG00000010290	tent5ba	90	83.643	Amphilophus_citrinellus
ENSCVAG00000013534	tent5bb	97	83.333	ENSAOCG00000018686	tent5ba	99	83.333	Amphiprion_ocellaris
ENSCVAG00000013534	tent5bb	100	91.349	ENSAOCG00000021898	tent5bb	100	91.349	Amphiprion_ocellaris
ENSCVAG00000013534	tent5bb	97	83.333	ENSAPEG00000018735	tent5ba	99	83.333	Amphiprion_percula
ENSCVAG00000013534	tent5bb	100	91.349	ENSAPEG00000004406	tent5bb	100	91.349	Amphiprion_percula
ENSCVAG00000013534	tent5bb	100	91.837	ENSATEG00000009686	tent5bb	100	91.837	Anabas_testudineus
ENSCVAG00000013534	tent5bb	100	84.518	ENSATEG00000023735	tent5ba	100	84.518	Anabas_testudineus
ENSCVAG00000013534	tent5bb	100	90.585	ENSACLG00000009811	tent5bb	100	90.585	Astatotilapia_calliptera
ENSCVAG00000013534	tent5bb	98	83.247	ENSACLG00000012695	tent5ba	99	83.247	Astatotilapia_calliptera
ENSCVAG00000013534	tent5bb	100	80.153	ENSAMXG00000037518	tent5ba	100	80.153	Astyanax_mexicanus
ENSCVAG00000013534	tent5bb	99	85.969	ENSAMXG00000032411	tent5bb	99	85.969	Astyanax_mexicanus
ENSCVAG00000013534	tent5bb	100	81.772	ENSCSEG00000005309	tent5ba	100	81.772	Cynoglossus_semilaevis
ENSCVAG00000013534	tent5bb	100	83.969	ENSDARG00000011797	tent5bb	100	83.969	Danio_rerio
ENSCVAG00000013534	tent5bb	100	81.934	ENSDARG00000039943	tent5ba	100	81.934	Danio_rerio
ENSCVAG00000013534	tent5bb	100	83.459	ENSELUG00000011161	tent5bb	100	83.459	Esox_lucius
ENSCVAG00000013534	tent5bb	99	78.663	ENSELUG00000022605	tent5ba	98	78.663	Esox_lucius
ENSCVAG00000013534	tent5bb	99	82.005	ENSFHEG00000015561	tent5ba	99	82.005	Fundulus_heteroclitus
ENSCVAG00000013534	tent5bb	100	94.898	ENSFHEG00000005285	tent5bb	100	94.898	Fundulus_heteroclitus
ENSCVAG00000013534	tent5bb	100	85.025	ENSGMOG00000018930	tent5bb	99	85.025	Gadus_morhua
ENSCVAG00000013534	tent5bb	87	79.070	ENSGMOG00000019728	-	100	79.070	Gadus_morhua
ENSCVAG00000013534	tent5bb	100	95.408	ENSGAFG00000000761	tent5bb	100	95.408	Gambusia_affinis
ENSCVAG00000013534	tent5bb	99	82.519	ENSGAFG00000002722	tent5ba	99	82.519	Gambusia_affinis
ENSCVAG00000013534	tent5bb	100	82.741	ENSGACG00000007269	tent5ba	95	84.011	Gasterosteus_aculeatus
ENSCVAG00000013534	tent5bb	100	88.776	ENSGACG00000007689	tent5bb	99	88.776	Gasterosteus_aculeatus
ENSCVAG00000013534	tent5bb	98	83.247	ENSHBUG00000020683	tent5ba	99	83.247	Haplochromis_burtoni
ENSCVAG00000013534	tent5bb	99	90.561	ENSHBUG00000010176	tent5bb	99	90.561	Haplochromis_burtoni
ENSCVAG00000013534	tent5bb	100	80.711	ENSHCOG00000005840	tent5ba	100	80.711	Hippocampus_comes
ENSCVAG00000013534	tent5bb	99	80.928	ENSIPUG00000010747	FAM46A	99	80.928	Ictalurus_punctatus
ENSCVAG00000013534	tent5bb	99	81.122	ENSIPUG00000016887	fam46b	99	81.122	Ictalurus_punctatus
ENSCVAG00000013534	tent5bb	100	82.234	ENSKMAG00000013207	tent5ba	100	82.234	Kryptolebias_marmoratus
ENSCVAG00000013534	tent5bb	100	89.567	ENSKMAG00000012836	tent5bb	100	89.567	Kryptolebias_marmoratus
ENSCVAG00000013534	tent5bb	100	90.076	ENSLBEG00000001602	tent5bb	100	90.076	Labrus_bergylta
ENSCVAG00000013534	tent5bb	100	83.503	ENSLBEG00000007247	tent5ba	100	83.503	Labrus_bergylta
ENSCVAG00000013534	tent5bb	100	90.076	ENSLBEG00000005911	-	100	90.076	Labrus_bergylta
ENSCVAG00000013534	tent5bb	100	81.170	ENSLOCG00000003743	tent5bb	100	81.170	Lepisosteus_oculatus
ENSCVAG00000013534	tent5bb	100	82.487	ENSMAMG00000023970	tent5ba	100	82.487	Mastacembelus_armatus
ENSCVAG00000013534	tent5bb	100	92.112	ENSMAMG00000002667	tent5bb	86	92.112	Mastacembelus_armatus
ENSCVAG00000013534	tent5bb	100	90.585	ENSMZEG00005016765	tent5bb	100	90.585	Maylandia_zebra
ENSCVAG00000013534	tent5bb	98	83.247	ENSMZEG00005019712	tent5ba	99	83.247	Maylandia_zebra
ENSCVAG00000013534	tent5bb	100	91.349	ENSMMOG00000014403	tent5bb	100	91.349	Mola_mola
ENSCVAG00000013534	tent5bb	98	83.377	ENSMMOG00000008974	tent5ba	99	83.377	Mola_mola
ENSCVAG00000013534	tent5bb	99	82.353	ENSMALG00000007424	tent5ba	99	82.353	Monopterus_albus
ENSCVAG00000013534	tent5bb	100	89.313	ENSMALG00000016702	tent5bb	100	89.313	Monopterus_albus
ENSCVAG00000013534	tent5bb	98	82.990	ENSNBRG00000000536	tent5ba	99	82.990	Neolamprologus_brichardi
ENSCVAG00000013534	tent5bb	100	90.585	ENSNBRG00000021689	tent5bb	100	90.585	Neolamprologus_brichardi
ENSCVAG00000013534	tent5bb	100	90.840	ENSONIG00000007603	tent5bb	100	90.840	Oreochromis_niloticus
ENSCVAG00000013534	tent5bb	98	83.247	ENSONIG00000006760	tent5ba	99	83.247	Oreochromis_niloticus
ENSCVAG00000013534	tent5bb	100	90.306	ENSORLG00000020877	tent5bb	97	90.306	Oryzias_latipes
ENSCVAG00000013534	tent5bb	99	82.776	ENSORLG00000028579	tent5ba	99	82.776	Oryzias_latipes
ENSCVAG00000013534	tent5bb	99	83.033	ENSORLG00020022604	tent5ba	100	82.864	Oryzias_latipes_hni
ENSCVAG00000013534	tent5bb	100	90.306	ENSORLG00020020448	tent5bb	97	90.306	Oryzias_latipes_hni
ENSCVAG00000013534	tent5bb	99	82.776	ENSORLG00015008860	tent5ba	99	82.776	Oryzias_latipes_hsok
ENSCVAG00000013534	tent5bb	100	89.796	ENSORLG00015008671	tent5bb	97	89.796	Oryzias_latipes_hsok
ENSCVAG00000013534	tent5bb	99	84.062	ENSOMEG00000010794	tent5ba	99	84.062	Oryzias_melastigma
ENSCVAG00000013534	tent5bb	100	82.697	ENSPKIG00000020331	-	100	82.697	Paramormyrops_kingsleyae
ENSCVAG00000013534	tent5bb	100	79.898	ENSPKIG00000013826	-	100	79.898	Paramormyrops_kingsleyae
ENSCVAG00000013534	tent5bb	100	82.487	ENSPMGG00000001810	tent5ba	100	82.487	Periophthalmus_magnuspinnatus
ENSCVAG00000013534	tent5bb	98	89.062	ENSPMGG00000016426	tent5bb	98	89.062	Periophthalmus_magnuspinnatus
ENSCVAG00000013534	tent5bb	99	82.776	ENSPFOG00000009565	tent5ba	99	82.776	Poecilia_formosa
ENSCVAG00000013534	tent5bb	100	95.408	ENSPFOG00000002816	tent5bb	100	95.408	Poecilia_formosa
ENSCVAG00000013534	tent5bb	95	83.690	ENSPLAG00000002262	tent5ba	90	83.690	Poecilia_latipinna
ENSCVAG00000013534	tent5bb	99	95.349	ENSPLAG00000008840	tent5bb	99	95.349	Poecilia_latipinna
ENSCVAG00000013534	tent5bb	99	82.776	ENSPMEG00000010433	tent5ba	99	82.776	Poecilia_mexicana
ENSCVAG00000013534	tent5bb	100	95.153	ENSPMEG00000012300	tent5bb	100	95.153	Poecilia_mexicana
ENSCVAG00000013534	tent5bb	87	96.774	ENSPREG00000014751	tent5bb	70	96.774	Poecilia_reticulata
ENSCVAG00000013534	tent5bb	99	82.519	ENSPREG00000008620	tent5ba	99	82.519	Poecilia_reticulata
ENSCVAG00000013534	tent5bb	100	90.331	ENSPNYG00000005829	tent5bb	100	90.331	Pundamilia_nyererei
ENSCVAG00000013534	tent5bb	98	83.247	ENSPNYG00000005263	tent5ba	99	83.247	Pundamilia_nyererei
ENSCVAG00000013534	tent5bb	98	86.494	ENSPNAG00000025421	tent5bb	96	85.861	Pygocentrus_nattereri
ENSCVAG00000013534	tent5bb	100	82.697	ENSPNAG00000022093	tent5ba	100	82.697	Pygocentrus_nattereri
ENSCVAG00000013534	tent5bb	100	80.662	ENSSFOG00015022222	tent5bb	100	80.662	Scleropages_formosus
ENSCVAG00000013534	tent5bb	100	83.756	ENSSMAG00000002009	tent5ba	100	83.756	Scophthalmus_maximus
ENSCVAG00000013534	tent5bb	100	88.550	ENSSMAG00000020437	tent5bb	88	88.102	Scophthalmus_maximus
ENSCVAG00000013534	tent5bb	100	91.349	ENSSDUG00000001461	tent5bb	100	91.349	Seriola_dumerili
ENSCVAG00000013534	tent5bb	100	83.503	ENSSDUG00000017177	tent5ba	100	83.503	Seriola_dumerili
ENSCVAG00000013534	tent5bb	100	83.503	ENSSLDG00000016410	tent5ba	100	83.503	Seriola_lalandi_dorsalis
ENSCVAG00000013534	tent5bb	100	91.094	ENSSLDG00000020016	tent5bb	100	91.094	Seriola_lalandi_dorsalis
ENSCVAG00000013534	tent5bb	100	91.603	ENSSPAG00000006276	tent5bb	86	91.603	Stegastes_partitus
ENSCVAG00000013534	tent5bb	97	83.594	ENSSPAG00000012949	tent5ba	99	83.594	Stegastes_partitus
ENSCVAG00000013534	tent5bb	100	89.796	ENSTRUG00000010330	tent5bb	100	89.796	Takifugu_rubripes
ENSCVAG00000013534	tent5bb	100	84.010	ENSTRUG00000019516	tent5ba	100	84.010	Takifugu_rubripes
ENSCVAG00000013534	tent5bb	100	85.459	ENSTNIG00000014035	tent5bb	99	85.459	Tetraodon_nigroviridis
ENSCVAG00000013534	tent5bb	100	82.143	ENSTNIG00000009661	tent5ba	99	82.143	Tetraodon_nigroviridis
ENSCVAG00000013534	tent5bb	98	82.857	ENSXCOG00000016124	tent5ba	99	82.857	Xiphophorus_couchianus
ENSCVAG00000013534	tent5bb	88	95.362	ENSXCOG00000007280	tent5bb	95	95.362	Xiphophorus_couchianus
ENSCVAG00000013534	tent5bb	99	82.519	ENSXMAG00000010694	tent5ba	99	82.519	Xiphophorus_maculatus
ENSCVAG00000013534	tent5bb	100	95.153	ENSXMAG00000022155	tent5bb	100	95.153	Xiphophorus_maculatus