EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000013735 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 10390 bases
Position: chrKL653171.1:112829-123218
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000011434	DNA_pol_A_exo1	PF01612.20	8.6e-11	1	1
ENSCVAP00000011442	DNA_pol_A_exo1	PF01612.20	1.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000018394	-	660	-	ENSCVAP00000011434	219 (aa)	-	-
ENSCVAT00000029939	-	813	-	ENSCVAP00000011442	270 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000013735's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000013735's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000013735	-	87	60.806	ENSAPOG00000004287	-	90	58.868	Acanthochromis_polyacanthus
ENSCVAG00000013735	-	86	63.717	ENSAOCG00000009355	-	60	51.242	Amphiprion_ocellaris
ENSCVAG00000013735	-	87	63.877	ENSAPEG00000002194	-	88	51.393	Amphiprion_percula
ENSCVAG00000013735	-	70	39.474	ENSAPLG00000013650	-	94	42.408	Anas_platyrhynchos
ENSCVAG00000013735	-	80	40.845	ENSACAG00000003676	EXD1	62	39.344	Anolis_carolinensis
ENSCVAG00000013735	-	74	42.500	ENSCJAG00000020765	EXD1	56	34.416	Callithrix_jacchus
ENSCVAG00000013735	-	83	33.974	ENSCANG00000036848	EXD1	56	33.974	Colobus_angolensis_palliatus
ENSCVAG00000013735	-	85	55.804	ENSCSEG00000000904	-	60	48.113	Cynoglossus_semilaevis
ENSCVAG00000013735	-	82	49.770	ENSDARG00000098669	exd1	71	50.230	Danio_rerio
ENSCVAG00000013735	-	79	44.498	ENSDORG00000012079	Exd1	50	43.496	Dipodomys_ordii
ENSCVAG00000013735	-	95	36.134	ENSEBUG00000005530	-	90	35.317	Eptatretus_burgeri
ENSCVAG00000013735	-	83	55.505	ENSELUG00000006324	-	55	46.057	Esox_lucius
ENSCVAG00000013735	-	75	60.396	ENSFHEG00000013765	-	74	61.576	Fundulus_heteroclitus
ENSCVAG00000013735	-	81	64.286	ENSGMOG00000015956	-	95	49.669	Gadus_morhua
ENSCVAG00000013735	-	82	41.204	ENSGALG00000041449	EXD1	57	41.204	Gallus_gallus
ENSCVAG00000013735	-	86	63.274	ENSGAFG00000017161	-	62	54.037	Gambusia_affinis
ENSCVAG00000013735	-	76	62.927	ENSHBUG00000017880	-	51	63.902	Haplochromis_burtoni
ENSCVAG00000013735	-	72	53.608	ENSIPUG00000003370	-	56	55.385	Ictalurus_punctatus
ENSCVAG00000013735	-	89	60.345	ENSLBEG00000000022	-	59	50.000	Labrus_bergylta
ENSCVAG00000013735	-	88	60.000	ENSLBEG00000010957	-	74	61.373	Labrus_bergylta
ENSCVAG00000013735	-	81	49.545	ENSLOCG00000012278	-	81	41.026	Lepisosteus_oculatus
ENSCVAG00000013735	-	79	41.905	ENSMLEG00000033153	EXD1	71	44.076	Mandrillus_leucophaeus
ENSCVAG00000013735	-	82	40.183	ENSMGAG00000011179	EXD1	54	40.183	Meleagris_gallopavo
ENSCVAG00000013735	-	87	56.957	ENSMALG00000015814	-	74	47.812	Monopterus_albus
ENSCVAG00000013735	-	80	61.321	ENSNBRG00000003229	-	57	62.441	Neolamprologus_brichardi
ENSCVAG00000013735	-	84	61.538	ENSONIG00000012043	-	85	51.572	Oreochromis_niloticus
ENSCVAG00000013735	-	83	55.856	ENSORLG00000026344	-	65	45.794	Oryzias_latipes
ENSCVAG00000013735	-	83	55.856	ENSORLG00020005465	-	65	47.205	Oryzias_latipes_hni
ENSCVAG00000013735	-	83	56.306	ENSORLG00015004848	-	65	47.975	Oryzias_latipes_hsok
ENSCVAG00000013735	-	83	55.804	ENSOMEG00000019812	-	65	47.352	Oryzias_melastigma
ENSCVAG00000013735	-	81	50.698	ENSPKIG00000000671	-	59	41.667	Paramormyrops_kingsleyae
ENSCVAG00000013735	-	87	50.489	ENSPMGG00000015466	-	66	50.489	Periophthalmus_magnuspinnatus
ENSCVAG00000013735	-	77	36.058	ENSPMAG00000000920	-	52	50.000	Petromyzon_marinus
ENSCVAG00000013735	-	83	39.259	ENSPCIG00000027845	EXD1	62	39.259	Phascolarctos_cinereus
ENSCVAG00000013735	-	86	63.717	ENSPFOG00000013673	-	84	51.368	Poecilia_formosa
ENSCVAG00000013735	-	86	63.717	ENSPLAG00000014262	-	62	54.037	Poecilia_latipinna
ENSCVAG00000013735	-	86	63.717	ENSPMEG00000012071	-	62	54.037	Poecilia_mexicana
ENSCVAG00000013735	-	86	64.159	ENSPREG00000019468	-	62	54.348	Poecilia_reticulata
ENSCVAG00000013735	-	85	58.482	ENSPNAG00000008931	exd1	65	46.349	Pygocentrus_nattereri
ENSCVAG00000013735	-	79	42.105	ENSRBIG00000037257	EXD1	69	44.286	Rhinopithecus_bieti
ENSCVAG00000013735	-	84	45.865	ENSSFOG00015016852	-	84	45.865	Scleropages_formosus
ENSCVAG00000013735	-	88	56.777	ENSSMAG00000005451	-	54	56.777	Scophthalmus_maximus
ENSCVAG00000013735	-	84	63.348	ENSSDUG00000004368	exd1	58	51.840	Seriola_dumerili
ENSCVAG00000013735	-	87	58.491	ENSSLDG00000021803	-	52	58.491	Seriola_lalandi_dorsalis
ENSCVAG00000013735	-	83	36.000	ENSSPUG00000001716	EXD1	50	36.000	Sphenodon_punctatus
ENSCVAG00000013735	-	85	62.162	ENSSPAG00000023228	-	93	55.667	Stegastes_partitus
ENSCVAG00000013735	-	85	46.429	ENSTNIG00000017431	-	82	40.810	Tetraodon_nigroviridis
ENSCVAG00000013735	-	91	37.395	ENSXETG00000017895	exd1	61	38.655	Xenopus_tropicalis
ENSCVAG00000013735	-	95	63.265	ENSXCOG00000010879	-	94	56.839	Xiphophorus_couchianus
ENSCVAG00000013735	-	88	65.652	ENSXMAG00000014462	-	90	58.199	Xiphophorus_maculatus