EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000013902 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: ADP ribosylation factor 4
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 5301 bases
Position: chrKL654871.1:1344-6644
Accession: 107080822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000027516	MMR_HSR1	PF01926.23	7.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000018639	-	685	XM_015369027	ENSCVAP00000027516	161 (aa)	XP_015224513	-

Gene Model

Click here to download ENSCVAG00000013902's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000013902's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000013902	-	76	56.098	ENSCVAG00000001731	arl1	68	56.098
ENSCVAG00000013902	-	93	60.784	ENSCVAG00000021619	-	85	60.784
ENSCVAG00000013902	-	84	30.496	ENSCVAG00000018191	rab34a	53	30.496
ENSCVAG00000013902	-	73	31.707	ENSCVAG00000022649	-	61	31.707
ENSCVAG00000013902	-	84	65.942	ENSCVAG00000001271	arf3b	76	65.942
ENSCVAG00000013902	-	83	44.604	ENSCVAG00000004305	arl4aa	70	44.604
ENSCVAG00000013902	-	93	59.748	ENSCVAG00000007314	-	88	59.748
ENSCVAG00000013902	-	82	46.970	ENSCVAG00000021960	arl3	73	46.970
ENSCVAG00000013902	-	84	66.667	ENSCVAG00000000745	arf2b	79	70.312
ENSCVAG00000013902	-	87	38.889	ENSCVAG00000015183	ARL6	78	38.889
ENSCVAG00000013902	-	84	45.652	ENSCVAG00000020833	ARL5A	77	45.652
ENSCVAG00000013902	-	76	36.585	ENSCVAG00000006500	-	62	36.585
ENSCVAG00000013902	-	84	45.455	ENSCVAG00000023139	-	73	45.455
ENSCVAG00000013902	-	78	31.343	ENSCVAG00000018433	rab22a	67	31.343
ENSCVAG00000013902	-	71	30.469	ENSCVAG00000000862	-	54	30.469
ENSCVAG00000013902	-	79	45.312	ENSCVAG00000008445	arl2	69	45.312
ENSCVAG00000013902	-	93	59.748	ENSCVAG00000009124	ARF5	91	62.162
ENSCVAG00000013902	-	84	65.942	ENSCVAG00000013760	-	67	65.942
ENSCVAG00000013902	-	79	45.669	ENSCVAG00000016797	-	69	45.669
ENSCVAG00000013902	-	79	43.750	ENSCVAG00000019595	arl11	74	43.750
ENSCVAG00000013902	-	76	34.959	ENSCVAG00000022959	sar1b	62	34.959
ENSCVAG00000013902	-	80	30.882	ENSCVAG00000004221	srprb	50	30.882
ENSCVAG00000013902	-	78	30.000	ENSCVAG00000022799	-	63	30.000
ENSCVAG00000013902	-	78	41.270	ENSCVAG00000001545	arl13b	50	41.270
ENSCVAG00000013902	-	81	36.641	ENSCVAG00000005239	ARL8B	79	36.641
ENSCVAG00000013902	-	81	35.115	ENSCVAG00000020378	arl8ba	70	35.115
ENSCVAG00000013902	-	66	31.250	ENSCVAG00000008276	RAB15	72	34.091
ENSCVAG00000013902	-	80	49.219	ENSCVAG00000010611	arl3l2	68	49.219
ENSCVAG00000013902	-	78	31.579	ENSCVAG00000003537	si:dkey-16l2.16	61	31.579
ENSCVAG00000013902	-	84	65.217	ENSCVAG00000013374	-	77	65.217
ENSCVAG00000013902	-	84	65.217	ENSCVAG00000011381	-	77	65.217
ENSCVAG00000013902	-	70	36.283	ENSCVAG00000015162	sar1ab	57	36.283
ENSCVAG00000013902	-	86	36.076	ENSCVAG00000016249	ARL6	83	36.076
ENSCVAG00000013902	-	67	30.172	ENSCVAG00000009222	zgc:171927	52	30.172
ENSCVAG00000013902	-	84	44.928	ENSCVAG00000006913	arl8	77	44.928
ENSCVAG00000013902	-	93	60.784	ENSCVAG00000018314	-	85	60.784
ENSCVAG00000013902	-	89	42.657	ENSCVAG00000012706	arl5c	72	42.657
ENSCVAG00000013902	-	84	46.429	ENSCVAG00000020902	arl4cb	73	46.429
ENSCVAG00000013902	-	78	30.000	ENSCVAG00000022585	-	62	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000013902	-	89	75.342	ENSAPEG00000002838	-	82	75.342	Amphiprion_percula
ENSCVAG00000013902	-	93	77.181	ENSATEG00000003808	-	84	77.181	Anabas_testudineus
ENSCVAG00000013902	-	90	75.510	ENSATEG00000003847	-	82	75.510	Anabas_testudineus
ENSCVAG00000013902	-	84	81.022	ENSACLG00000009822	-	73	81.022	Astatotilapia_calliptera
ENSCVAG00000013902	-	93	82.119	ENSFHEG00000019659	-	84	82.119	Fundulus_heteroclitus
ENSCVAG00000013902	-	61	78.788	ENSGAFG00000002801	-	88	78.788	Gambusia_affinis
ENSCVAG00000013902	-	90	75.839	ENSGACG00000003831	-	83	75.839	Gasterosteus_aculeatus
ENSCVAG00000013902	-	89	75.342	ENSHBUG00000001250	-	82	75.342	Haplochromis_burtoni
ENSCVAG00000013902	-	84	80.292	ENSLBEG00000027205	-	77	80.292	Labrus_bergylta
ENSCVAG00000013902	-	91	77.027	ENSMAMG00000013955	-	82	76.027	Mastacembelus_armatus
ENSCVAG00000013902	-	89	77.397	ENSMZEG00005016274	-	82	77.397	Maylandia_zebra
ENSCVAG00000013902	-	89	77.397	ENSMZEG00005016277	-	82	77.397	Maylandia_zebra
ENSCVAG00000013902	-	89	74.658	ENSMMOG00000013651	-	81	74.658	Mola_mola
ENSCVAG00000013902	-	89	76.027	ENSONIG00000004340	-	82	76.027	Oreochromis_niloticus
ENSCVAG00000013902	-	90	76.871	ENSPLAG00000015887	-	82	76.871	Poecilia_latipinna
ENSCVAG00000013902	-	90	76.871	ENSPMEG00000007064	-	82	76.871	Poecilia_mexicana
ENSCVAG00000013902	-	90	76.871	ENSPREG00000000912	-	86	76.871	Poecilia_reticulata
ENSCVAG00000013902	-	80	82.171	ENSSMAG00000002487	-	81	80.147	Scophthalmus_maximus
ENSCVAG00000013902	-	89	74.658	ENSSDUG00000020599	-	82	74.658	Seriola_dumerili
ENSCVAG00000013902	-	89	74.658	ENSSLDG00000020097	-	82	74.658	Seriola_lalandi_dorsalis
ENSCVAG00000013902	-	88	79.720	ENSSPAG00000017484	-	86	79.720	Stegastes_partitus
ENSCVAG00000013902	-	89	71.233	ENSTRUG00000025171	-	90	71.233	Takifugu_rubripes
ENSCVAG00000013902	-	61	75.758	ENSTNIG00000005043	-	88	75.758	Tetraodon_nigroviridis
ENSCVAG00000013902	-	83	70.896	ENSTNIG00000018302	-	61	69.286	Tetraodon_nigroviridis
ENSCVAG00000013902	-	83	74.436	ENSTNIG00000001632	-	61	72.662	Tetraodon_nigroviridis
ENSCVAG00000013902	-	86	72.464	ENSTNIG00000000796	-	61	72.464	Tetraodon_nigroviridis
ENSCVAG00000013902	-	90	77.551	ENSXMAG00000029601	-	82	77.551	Xiphophorus_maculatus