EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000014038 (Gene tree)
Gene ID: 107102923
Gene Symbol: RAB29
Alias: RAB7L|RAB7L1
Full Name: RAB29%2C member RAS oncogene family
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 10573 bases
Position: chrKL653842.1:146498-157070
Accession: 107102923
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000027582	MMR_HSR1	PF01926.23	1.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000018757	RAB29-201	736	-	ENSCVAP00000011697	189 (aa)	-	-
ENSCVAT00000030037	RAB29-203	621	XM_015402387	ENSCVAP00000027582	206 (aa)	XP_015257873	-
ENSCVAT00000018769	RAB29-202	549	-	ENSCVAP00000011709	182 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000014038's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000014038's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000014038	RAB29	99	31.455	ENSCVAG00000020016	rab11al	95	31.455
ENSCVAG00000014038	RAB29	99	32.719	ENSCVAG00000008276	RAB15	97	32.719
ENSCVAG00000014038	RAB29	99	33.180	ENSCVAG00000017623	rab2a	98	33.180
ENSCVAG00000014038	RAB29	85	37.853	ENSCVAG00000015862	-	81	37.853
ENSCVAG00000014038	RAB29	82	32.544	ENSCVAG00000017021	-	75	32.544
ENSCVAG00000014038	RAB29	99	33.810	ENSCVAG00000022585	-	97	33.810
ENSCVAG00000014038	RAB29	86	34.807	ENSCVAG00000010727	rab4a	82	34.807
ENSCVAG00000014038	RAB29	83	33.140	ENSCVAG00000011432	rabl2	74	33.140
ENSCVAG00000014038	RAB29	97	37.313	ENSCVAG00000022649	-	97	37.313
ENSCVAG00000014038	RAB29	76	37.342	ENSCVAG00000009550	rab5c	69	37.342
ENSCVAG00000014038	RAB29	76	37.975	ENSCVAG00000008239	rab5aa	70	37.975
ENSCVAG00000014038	RAB29	75	36.538	ENSCVAG00000011665	rab33a	55	36.538
ENSCVAG00000014038	RAB29	83	33.721	ENSCVAG00000012889	rab6ba	80	33.721
ENSCVAG00000014038	RAB29	78	37.195	ENSCVAG00000020501	rab23	83	37.989
ENSCVAG00000014038	RAB29	82	33.333	ENSCVAG00000009222	zgc:171927	76	33.333
ENSCVAG00000014038	RAB29	74	37.013	ENSCVAG00000019227	zgc:101559	64	37.013
ENSCVAG00000014038	RAB29	85	34.615	ENSCVAG00000017064	si:dkey-34d22.5	81	34.615
ENSCVAG00000014038	RAB29	83	34.682	ENSCVAG00000003539	rab12	83	33.810
ENSCVAG00000014038	RAB29	82	37.791	ENSCVAG00000003537	si:dkey-16l2.16	97	33.333
ENSCVAG00000014038	RAB29	66	30.370	ENSCVAG00000005239	ARL8B	77	30.370
ENSCVAG00000014038	RAB29	98	34.653	ENSCVAG00000021826	rab9b	97	34.653
ENSCVAG00000014038	RAB29	82	33.136	ENSCVAG00000019751	-	75	33.136
ENSCVAG00000014038	RAB29	81	35.928	ENSCVAG00000015451	rab18a	79	35.928
ENSCVAG00000014038	RAB29	77	36.478	ENSCVAG00000018085	rab30	75	36.478
ENSCVAG00000014038	RAB29	91	34.555	ENSCVAG00000022353	rab14	86	34.555
ENSCVAG00000014038	RAB29	98	35.149	ENSCVAG00000016312	rab9a	92	35.149
ENSCVAG00000014038	RAB29	83	37.791	ENSCVAG00000014915	RAB39B	79	37.791
ENSCVAG00000014038	RAB29	99	32.536	ENSCVAG00000022799	-	98	32.536
ENSCVAG00000014038	RAB29	92	31.000	ENSCVAG00000013878	rab11a	90	31.000
ENSCVAG00000014038	RAB29	98	31.373	ENSCVAG00000014416	-	91	31.373
ENSCVAG00000014038	RAB29	99	35.122	ENSCVAG00000012806	rab35b	98	35.122
ENSCVAG00000014038	RAB29	82	32.544	ENSCVAG00000019718	-	75	32.544
ENSCVAG00000014038	RAB29	85	34.286	ENSCVAG00000005429	-	84	34.286
ENSCVAG00000014038	RAB29	81	30.178	ENSCVAG00000020003	rab25b	79	30.303
ENSCVAG00000014038	RAB29	93	37.629	ENSCVAG00000002953	RAB9A	97	37.629
ENSCVAG00000014038	RAB29	85	34.286	ENSCVAG00000000281	RAB7A	84	34.286
ENSCVAG00000014038	RAB29	81	34.302	ENSCVAG00000001150	si:dkey-13a21.4	81	34.302
ENSCVAG00000014038	RAB29	84	32.571	ENSCVAG00000022249	rab6a	81	32.571
ENSCVAG00000014038	RAB29	84	35.429	ENSCVAG00000004751	rab6bb	81	35.429
ENSCVAG00000014038	RAB29	73	35.032	ENSCVAG00000000862	-	67	35.032
ENSCVAG00000014038	RAB29	98	31.683	ENSCVAG00000001618	rab41	91	31.683
ENSCVAG00000014038	RAB29	80	31.548	ENSCVAG00000004027	rheb	87	31.548

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000014038	RAB29	100	72.596	ENSATEG00000024739	RAB29	100	72.596	Anabas_testudineus
ENSCVAG00000014038	RAB29	80	83.636	ENSACLG00000008602	RAB29	100	83.636	Astatotilapia_calliptera
ENSCVAG00000014038	RAB29	83	55.814	ENSEBUG00000002259	RAB29	83	55.814	Eptatretus_burgeri
ENSCVAG00000014038	RAB29	87	78.333	ENSFHEG00000015993	RAB29	88	78.333	Fundulus_heteroclitus
ENSCVAG00000014038	RAB29	80	75.000	ENSGMOG00000018475	RAB29	99	75.000	Gadus_morhua
ENSCVAG00000014038	RAB29	100	77.184	ENSGAFG00000000629	RAB29	100	77.184	Gambusia_affinis
ENSCVAG00000014038	RAB29	100	68.932	ENSGACG00000010473	RAB29	99	68.932	Gasterosteus_aculeatus
ENSCVAG00000014038	RAB29	100	75.481	ENSHBUG00000012594	RAB29	100	75.481	Haplochromis_burtoni
ENSCVAG00000014038	RAB29	99	68.473	ENSKMAG00000017150	-	91	68.473	Kryptolebias_marmoratus
ENSCVAG00000014038	RAB29	99	74.146	ENSLBEG00000006152	-	100	74.146	Labrus_bergylta
ENSCVAG00000014038	RAB29	99	74.146	ENSLBEG00000018812	RAB29	100	74.146	Labrus_bergylta
ENSCVAG00000014038	RAB29	88	60.109	ENSLACG00000002523	RAB29	89	60.109	Latimeria_chalumnae
ENSCVAG00000014038	RAB29	100	74.272	ENSMAMG00000006963	RAB29	100	74.272	Mastacembelus_armatus
ENSCVAG00000014038	RAB29	100	74.519	ENSMZEG00005026799	RAB29	100	74.519	Maylandia_zebra
ENSCVAG00000014038	RAB29	100	72.816	ENSMALG00000018436	RAB29	90	72.816	Monopterus_albus
ENSCVAG00000014038	RAB29	78	82.609	ENSNBRG00000008714	RAB29	71	82.609	Neolamprologus_brichardi
ENSCVAG00000014038	RAB29	100	74.396	ENSONIG00000014892	RAB29	100	74.396	Oreochromis_niloticus
ENSCVAG00000014038	RAB29	100	70.388	ENSORLG00000027892	RAB29	100	70.388	Oryzias_latipes
ENSCVAG00000014038	RAB29	100	68.932	ENSORLG00020005240	RAB29	100	68.932	Oryzias_latipes_hni
ENSCVAG00000014038	RAB29	100	69.417	ENSORLG00015020441	-	100	69.417	Oryzias_latipes_hsok
ENSCVAG00000014038	RAB29	100	70.388	ENSOMEG00000000336	RAB29	100	70.388	Oryzias_melastigma
ENSCVAG00000014038	RAB29	85	72.571	ENSPMGG00000008290	-	93	70.430	Periophthalmus_magnuspinnatus
ENSCVAG00000014038	RAB29	100	76.214	ENSPFOG00000013066	RAB29	99	76.214	Poecilia_formosa
ENSCVAG00000014038	RAB29	99	75.862	ENSPLAG00000002600	RAB29	95	75.862	Poecilia_latipinna
ENSCVAG00000014038	RAB29	100	77.184	ENSPMEG00000021807	RAB29	100	77.184	Poecilia_mexicana
ENSCVAG00000014038	RAB29	100	78.155	ENSPREG00000020276	RAB29	100	78.155	Poecilia_reticulata
ENSCVAG00000014038	RAB29	100	74.519	ENSPNYG00000015355	RAB29	100	74.519	Pundamilia_nyererei
ENSCVAG00000014038	RAB29	100	71.014	ENSSDUG00000006543	RAB29	100	71.014	Seriola_dumerili
ENSCVAG00000014038	RAB29	99	52.941	ENSSPUG00000015007	RAB29	98	52.941	Sphenodon_punctatus
ENSCVAG00000014038	RAB29	100	72.330	ENSSPAG00000002062	RAB29	100	72.330	Stegastes_partitus
ENSCVAG00000014038	RAB29	100	76.699	ENSXCOG00000016370	RAB29	100	76.699	Xiphophorus_couchianus
ENSCVAG00000014038	RAB29	100	77.670	ENSXMAG00000029823	RAB29	100	77.670	Xiphophorus_maculatus