EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000014060 (Gene tree)
Gene ID: 107083074
Gene Symbol: elavl3
Alias: elav-related C|elavC|elrc|etID309927.3|huc|id:ibd1248|wu:fb77b03|zHuC
Full Name: ELAV like RNA binding protein 3
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 11977 bases
Position: chrKL652568.1:1095052-1107028
Accession: 107083074
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000011707	RRM_5	PF13893.6	1.7e-12	1	2
ENSCVAP00000011707	RRM_5	PF13893.6	1.7e-12	2	2
ENSCVAP00000027597	RRM_5	PF13893.6	2e-12	1	2
ENSCVAP00000027597	RRM_5	PF13893.6	2e-12	2	2
ENSCVAP00000011727	RRM_5	PF13893.6	2.1e-12	1	2
ENSCVAP00000011727	RRM_5	PF13893.6	2.1e-12	2	2
ENSCVAP00000011732	RRM_5	PF13893.6	2.7e-12	1	2
ENSCVAP00000011732	RRM_5	PF13893.6	2.7e-12	2	2
ENSCVAP00000011707	RRM_1	PF00076.22	1.4e-64	1	3
ENSCVAP00000011707	RRM_1	PF00076.22	1.4e-64	2	3
ENSCVAP00000011707	RRM_1	PF00076.22	1.4e-64	3	3
ENSCVAP00000027597	RRM_1	PF00076.22	1.5e-64	1	3
ENSCVAP00000027597	RRM_1	PF00076.22	1.5e-64	2	3
ENSCVAP00000027597	RRM_1	PF00076.22	1.5e-64	3	3
ENSCVAP00000011727	RRM_1	PF00076.22	1.6e-64	1	3
ENSCVAP00000011727	RRM_1	PF00076.22	1.6e-64	2	3
ENSCVAP00000011727	RRM_1	PF00076.22	1.6e-64	3	3
ENSCVAP00000011732	RRM_1	PF00076.22	2.1e-64	1	3
ENSCVAP00000011732	RRM_1	PF00076.22	2.1e-64	2	3
ENSCVAP00000011732	RRM_1	PF00076.22	2.1e-64	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000030048	-	1670	XM_015372032	ENSCVAP00000027597	352 (aa)	XP_015227518	-
ENSCVAT00000030039	-	1038	-	ENSCVAP00000011707	345 (aa)	-	-
ENSCVAT00000018868	-	1688	XM_015372024	ENSCVAP00000011727	358 (aa)	XP_015227510	UPI000298C365
ENSCVAT00000018794	-	1742	XM_015372019	ENSCVAP00000011732	376 (aa)	XP_015227505	-

Gene Model

Click here to download ENSCVAG00000014060's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000014060's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000014060	elavl3	86	40.698	ENSCVAG00000018670	si:dkey-205h23.2	78	33.333
ENSCVAG00000014060	elavl3	89	35.354	ENSCVAG00000013006	rbms2b	51	36.667
ENSCVAG00000014060	elavl3	90	37.349	ENSCVAG00000021872	pabpc1a	59	37.349
ENSCVAG00000014060	elavl3	90	37.179	ENSCVAG00000015489	tia1	70	37.179
ENSCVAG00000014060	elavl3	92	37.349	ENSCVAG00000005489	pabpc1b	59	37.349
ENSCVAG00000014060	elavl3	74	41.860	ENSCVAG00000009184	celf3b	56	41.860
ENSCVAG00000014060	elavl3	87	42.391	ENSCVAG00000004383	-	67	42.391
ENSCVAG00000014060	elavl3	78	36.905	ENSCVAG00000022814	-	72	36.905
ENSCVAG00000014060	elavl3	80	43.023	ENSCVAG00000009088	-	72	35.878
ENSCVAG00000014060	elavl3	90	37.179	ENSCVAG00000013609	tia1l	79	37.179
ENSCVAG00000014060	elavl3	51	33.333	ENSCVAG00000014698	rbms1a	54	32.338
ENSCVAG00000014060	elavl3	90	71.885	ENSCVAG00000017170	elavl1a	95	71.885
ENSCVAG00000014060	elavl3	89	37.179	ENSCVAG00000005689	tial1	68	37.179
ENSCVAG00000014060	elavl3	99	81.868	ENSCVAG00000013913	ELAVL2	94	81.868
ENSCVAG00000014060	elavl3	63	40.278	ENSCVAG00000004853	cirbpa	87	40.278
ENSCVAG00000014060	elavl3	66	36.667	ENSCVAG00000001635	rbms2a	57	36.667
ENSCVAG00000014060	elavl3	84	35.632	ENSCVAG00000018056	celf3a	71	35.632
ENSCVAG00000014060	elavl3	88	37.838	ENSCVAG00000014408	-	92	37.838
ENSCVAG00000014060	elavl3	99	83.424	ENSCVAG00000019080	elavl4	98	83.380
ENSCVAG00000014060	elavl3	92	36.145	ENSCVAG00000019246	pabpc4	60	36.145
ENSCVAG00000014060	elavl3	68	38.095	ENSCVAG00000002027	RBMS1	51	35.897
ENSCVAG00000014060	elavl3	90	66.559	ENSCVAG00000016617	-	92	67.203

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000014060	elavl3	100	88.889	ENSG00000196361	ELAVL3	100	90.000	Homo_sapiens
ENSCVAG00000014060	elavl3	99	99.419	ENSAPOG00000017565	elavl3	100	99.419	Acanthochromis_polyacanthus
ENSCVAG00000014060	elavl3	99	86.517	ENSAMEG00000010487	ELAVL3	99	87.640	Ailuropoda_melanoleuca
ENSCVAG00000014060	elavl3	99	99.419	ENSACIG00000024190	elavl3	100	99.419	Amphilophus_citrinellus
ENSCVAG00000014060	elavl3	100	100.000	ENSAOCG00000005054	elavl3	100	100.000	Amphiprion_ocellaris
ENSCVAG00000014060	elavl3	100	100.000	ENSAPEG00000011145	elavl3	100	100.000	Amphiprion_percula
ENSCVAG00000014060	elavl3	98	100.000	ENSATEG00000020941	elavl3	99	100.000	Anabas_testudineus
ENSCVAG00000014060	elavl3	98	92.222	ENSACAG00000016958	ELAVL3	93	92.222	Anolis_carolinensis
ENSCVAG00000014060	elavl3	100	89.136	ENSANAG00000030798	ELAVL3	100	90.251	Aotus_nancymaae
ENSCVAG00000014060	elavl3	100	99.420	ENSACLG00000018260	elavl3	100	99.420	Astatotilapia_calliptera
ENSCVAG00000014060	elavl3	100	98.864	ENSAMXG00000040498	elavl3	100	98.864	Astyanax_mexicanus
ENSCVAG00000014060	elavl3	100	89.167	ENSBTAG00000014412	ELAVL3	100	90.278	Bos_taurus
ENSCVAG00000014060	elavl3	100	87.193	ENSCJAG00000005589	ELAVL3	100	88.283	Callithrix_jacchus
ENSCVAG00000014060	elavl3	100	87.193	ENSCAFG00000017350	ELAVL3	100	88.283	Canis_familiaris
ENSCVAG00000014060	elavl3	99	89.213	ENSCAFG00020004614	ELAVL3	98	89.944	Canis_lupus_dingo
ENSCVAG00000014060	elavl3	99	87.603	ENSCHIG00000003436	ELAVL3	99	88.705	Capra_hircus
ENSCVAG00000014060	elavl3	99	87.328	ENSTSYG00000036621	ELAVL3	99	88.430	Carlito_syrichta
ENSCVAG00000014060	elavl3	90	74.383	ENSCAPG00000017620	ELAVL3	99	75.617	Cavia_aperea
ENSCVAG00000014060	elavl3	90	74.383	ENSCPOG00000001793	ELAVL3	99	75.617	Cavia_porcellus
ENSCVAG00000014060	elavl3	100	87.193	ENSCCAG00000034350	ELAVL3	100	88.283	Cebus_capucinus
ENSCVAG00000014060	elavl3	100	87.193	ENSCATG00000044086	ELAVL3	100	88.283	Cercocebus_atys
ENSCVAG00000014060	elavl3	100	86.921	ENSCLAG00000016404	ELAVL3	100	88.011	Chinchilla_lanigera
ENSCVAG00000014060	elavl3	96	91.304	ENSCSAG00000006755	ELAVL3	100	91.304	Chlorocebus_sabaeus
ENSCVAG00000014060	elavl3	100	92.222	ENSCPBG00000023982	ELAVL3	100	92.222	Chrysemys_picta_bellii
ENSCVAG00000014060	elavl3	100	87.193	ENSCANG00000038728	ELAVL3	100	88.283	Colobus_angolensis_palliatus
ENSCVAG00000014060	elavl3	100	86.649	ENSCGRG00001018927	Elavl3	100	87.738	Cricetulus_griseus_chok1gshd
ENSCVAG00000014060	elavl3	99	86.777	ENSCGRG00000007158	Elavl3	99	87.879	Cricetulus_griseus_crigri
ENSCVAG00000014060	elavl3	100	98.841	ENSCSEG00000021095	elavl3	100	98.841	Cynoglossus_semilaevis
ENSCVAG00000014060	elavl3	100	99.721	ENSDARG00000014420	elavl3	100	99.721	Danio_rerio
ENSCVAG00000014060	elavl3	99	86.226	ENSDORG00000002538	Elavl3	99	87.328	Dipodomys_ordii
ENSCVAG00000014060	elavl3	50	97.059	ENSETEG00000000164	-	57	97.059	Echinops_telfairi
ENSCVAG00000014060	elavl3	100	87.193	ENSEASG00005004561	ELAVL3	100	88.283	Equus_asinus_asinus
ENSCVAG00000014060	elavl3	99	89.045	ENSECAG00000020594	ELAVL3	100	91.150	Equus_caballus
ENSCVAG00000014060	elavl3	100	98.017	ENSELUG00000023043	elavl3	100	98.017	Esox_lucius
ENSCVAG00000014060	elavl3	100	87.193	ENSFCAG00000024763	ELAVL3	100	88.283	Felis_catus
ENSCVAG00000014060	elavl3	100	86.127	ENSFDAG00000008449	ELAVL3	100	86.127	Fukomys_damarensis
ENSCVAG00000014060	elavl3	100	100.000	ENSFHEG00000001675	elavl3	100	100.000	Fundulus_heteroclitus
ENSCVAG00000014060	elavl3	100	99.721	ENSGMOG00000003760	elavl3	100	99.721	Gadus_morhua
ENSCVAG00000014060	elavl3	50	61.475	ENSGALG00000054488	-	77	65.289	Gallus_gallus
ENSCVAG00000014060	elavl3	58	76.378	ENSGALG00000047364	-	100	76.378	Gallus_gallus
ENSCVAG00000014060	elavl3	99	100.000	ENSGAFG00000016015	elavl3	98	100.000	Gambusia_affinis
ENSCVAG00000014060	elavl3	100	99.441	ENSGACG00000013839	elavl3	100	99.441	Gasterosteus_aculeatus
ENSCVAG00000014060	elavl3	84	91.803	ENSGAGG00000016141	ELAVL3	100	91.803	Gopherus_agassizii
ENSCVAG00000014060	elavl3	99	87.328	ENSGGOG00000008635	ELAVL3	99	88.430	Gorilla_gorilla
ENSCVAG00000014060	elavl3	100	99.716	ENSHBUG00000020978	elavl3	100	99.716	Haplochromis_burtoni
ENSCVAG00000014060	elavl3	100	87.193	ENSHGLG00000015199	ELAVL3	100	88.283	Heterocephalus_glaber_female
ENSCVAG00000014060	elavl3	84	69.000	ENSHGLG00000019379	-	97	69.000	Heterocephalus_glaber_female
ENSCVAG00000014060	elavl3	95	85.673	ENSHGLG00100011200	ELAVL3	100	86.819	Heterocephalus_glaber_male
ENSCVAG00000014060	elavl3	100	99.432	ENSHCOG00000015894	elavl3	100	99.432	Hippocampus_comes
ENSCVAG00000014060	elavl3	99	98.834	ENSIPUG00000013002	elavl3	98	98.834	Ictalurus_punctatus
ENSCVAG00000014060	elavl3	100	87.193	ENSSTOG00000021111	ELAVL3	100	88.283	Ictidomys_tridecemlineatus
ENSCVAG00000014060	elavl3	99	88.154	ENSJJAG00000023513	Elavl3	99	88.154	Jaculus_jaculus
ENSCVAG00000014060	elavl3	99	99.419	ENSKMAG00000017412	elavl3	100	99.419	Kryptolebias_marmoratus
ENSCVAG00000014060	elavl3	100	99.130	ENSLBEG00000008073	elavl3	100	98.674	Labrus_bergylta
ENSCVAG00000014060	elavl3	100	96.438	ENSLOCG00000007647	elavl3	100	96.438	Lepisosteus_oculatus
ENSCVAG00000014060	elavl3	99	87.088	ENSLAFG00000005013	ELAVL3	99	88.187	Loxodonta_africana
ENSCVAG00000014060	elavl3	100	87.193	ENSMFAG00000003692	ELAVL3	100	88.283	Macaca_fascicularis
ENSCVAG00000014060	elavl3	100	87.193	ENSMMUG00000020616	ELAVL3	100	88.283	Macaca_mulatta
ENSCVAG00000014060	elavl3	100	86.921	ENSMNEG00000043973	ELAVL3	100	88.011	Macaca_nemestrina
ENSCVAG00000014060	elavl3	97	83.265	ENSMLEG00000013976	ELAVL3	100	83.265	Mandrillus_leucophaeus
ENSCVAG00000014060	elavl3	99	99.415	ENSMAMG00000011697	elavl3	99	99.415	Mastacembelus_armatus
ENSCVAG00000014060	elavl3	100	100.000	ENSMZEG00005019053	elavl3	100	100.000	Maylandia_zebra
ENSCVAG00000014060	elavl3	99	86.777	ENSMAUG00000016478	Elavl3	99	87.879	Mesocricetus_auratus
ENSCVAG00000014060	elavl3	99	87.328	ENSMICG00000016528	ELAVL3	99	88.430	Microcebus_murinus
ENSCVAG00000014060	elavl3	100	86.649	ENSMOCG00000002046	Elavl3	100	87.738	Microtus_ochrogaster
ENSCVAG00000014060	elavl3	99	100.000	ENSMMOG00000012154	elavl3	99	100.000	Mola_mola
ENSCVAG00000014060	elavl3	99	90.730	ENSMODG00000006653	ELAVL3	92	90.730	Monodelphis_domestica
ENSCVAG00000014060	elavl3	99	100.000	ENSMALG00000016659	elavl3	99	100.000	Monopterus_albus
ENSCVAG00000014060	elavl3	98	89.205	MGP_CAROLIEiJ_G0031894	Elavl3	100	90.341	Mus_caroli
ENSCVAG00000014060	elavl3	100	86.649	ENSMUSG00000003410	Elavl3	100	89.200	Mus_musculus
ENSCVAG00000014060	elavl3	98	88.920	MGP_PahariEiJ_G0014760	Elavl3	100	90.057	Mus_pahari
ENSCVAG00000014060	elavl3	52	81.739	MGP_SPRETEiJ_G0033017	-	51	82.609	Mus_spretus
ENSCVAG00000014060	elavl3	100	86.921	ENSMPUG00000005040	ELAVL3	100	88.011	Mustela_putorius_furo
ENSCVAG00000014060	elavl3	99	88.462	ENSMLUG00000016320	ELAVL3	99	88.462	Myotis_lucifugus
ENSCVAG00000014060	elavl3	100	87.193	ENSNGAG00000000968	Elavl3	100	88.283	Nannospalax_galili
ENSCVAG00000014060	elavl3	99	100.000	ENSNBRG00000010319	elavl3	99	100.000	Neolamprologus_brichardi
ENSCVAG00000014060	elavl3	99	91.185	ENSMEUG00000016706	ELAVL3	99	91.185	Notamacropus_eugenii
ENSCVAG00000014060	elavl3	85	89.431	ENSOPRG00000007373	ELAVL3	99	89.431	Ochotona_princeps
ENSCVAG00000014060	elavl3	100	87.193	ENSODEG00000015790	ELAVL3	100	88.283	Octodon_degus
ENSCVAG00000014060	elavl3	99	100.000	ENSONIG00000001538	elavl3	98	100.000	Oreochromis_niloticus
ENSCVAG00000014060	elavl3	88	91.270	ENSOANG00000015046	ELAVL3	98	91.270	Ornithorhynchus_anatinus
ENSCVAG00000014060	elavl3	100	99.721	ENSORLG00000005379	elavl3	100	99.721	Oryzias_latipes
ENSCVAG00000014060	elavl3	100	100.000	ENSORLG00020004570	elavl3	100	100.000	Oryzias_latipes_hni
ENSCVAG00000014060	elavl3	100	98.883	ENSORLG00015000662	elavl3	100	98.883	Oryzias_latipes_hsok
ENSCVAG00000014060	elavl3	100	100.000	ENSOMEG00000023959	elavl3	100	100.000	Oryzias_melastigma
ENSCVAG00000014060	elavl3	100	87.193	ENSOGAG00000007072	ELAVL3	100	88.283	Otolemur_garnettii
ENSCVAG00000014060	elavl3	100	87.466	ENSOARG00000018464	ELAVL3	100	88.556	Ovis_aries
ENSCVAG00000014060	elavl3	100	87.193	ENSPPAG00000033972	ELAVL3	100	88.283	Pan_paniscus
ENSCVAG00000014060	elavl3	100	87.193	ENSPPRG00000005151	ELAVL3	100	88.283	Panthera_pardus
ENSCVAG00000014060	elavl3	97	85.251	ENSPTIG00000013610	ELAVL3	97	86.431	Panthera_tigris_altaica
ENSCVAG00000014060	elavl3	100	87.193	ENSPTRG00000010506	ELAVL3	100	88.283	Pan_troglodytes
ENSCVAG00000014060	elavl3	100	87.193	ENSPANG00000005849	ELAVL3	100	88.283	Papio_anubis
ENSCVAG00000014060	elavl3	100	99.162	ENSPKIG00000016207	elavl3	100	99.162	Paramormyrops_kingsleyae
ENSCVAG00000014060	elavl3	100	99.710	ENSPMGG00000002016	elavl3	100	99.710	Periophthalmus_magnuspinnatus
ENSCVAG00000014060	elavl3	98	100.000	ENSPFOG00000007754	elavl3	100	100.000	Poecilia_formosa
ENSCVAG00000014060	elavl3	100	98.841	ENSPLAG00000001547	elavl3	100	98.841	Poecilia_latipinna
ENSCVAG00000014060	elavl3	98	100.000	ENSPMEG00000010156	elavl3	99	100.000	Poecilia_mexicana
ENSCVAG00000014060	elavl3	100	100.000	ENSPREG00000006971	elavl3	100	100.000	Poecilia_reticulata
ENSCVAG00000014060	elavl3	84	80.224	ENSPPYG00000009583	-	98	81.343	Pongo_abelii
ENSCVAG00000014060	elavl3	83	88.182	ENSPCAG00000015952	ELAVL3	60	90.909	Procavia_capensis
ENSCVAG00000014060	elavl3	100	87.193	ENSPCOG00000023781	ELAVL3	100	88.283	Propithecus_coquereli
ENSCVAG00000014060	elavl3	100	87.193	ENSPVAG00000014893	ELAVL3	100	88.283	Pteropus_vampyrus
ENSCVAG00000014060	elavl3	100	99.420	ENSPNYG00000013186	elavl3	98	99.420	Pundamilia_nyererei
ENSCVAG00000014060	elavl3	100	98.841	ENSPNAG00000003633	elavl3	100	98.841	Pygocentrus_nattereri
ENSCVAG00000014060	elavl3	100	86.649	ENSRNOG00000013752	Elavl3	100	87.738	Rattus_norvegicus
ENSCVAG00000014060	elavl3	100	87.193	ENSRBIG00000034762	ELAVL3	100	88.283	Rhinopithecus_bieti
ENSCVAG00000014060	elavl3	89	87.600	ENSRROG00000034305	ELAVL3	99	90.435	Rhinopithecus_roxellana
ENSCVAG00000014060	elavl3	99	87.328	ENSSBOG00000030047	ELAVL3	100	90.385	Saimiri_boliviensis_boliviensis
ENSCVAG00000014060	elavl3	96	93.478	ENSSHAG00000005583	ELAVL3	100	93.478	Sarcophilus_harrisii
ENSCVAG00000014060	elavl3	94	99.112	ENSSFOG00015023630	elavl3	100	99.112	Scleropages_formosus
ENSCVAG00000014060	elavl3	99	99.123	ENSSMAG00000004671	elavl3	99	99.123	Scophthalmus_maximus
ENSCVAG00000014060	elavl3	99	99.419	ENSSDUG00000020708	elavl3	100	99.419	Seriola_dumerili
ENSCVAG00000014060	elavl3	100	99.716	ENSSLDG00000013769	elavl3	100	99.716	Seriola_lalandi_dorsalis
ENSCVAG00000014060	elavl3	99	77.473	ENSSARG00000005949	ELAVL3	99	78.571	Sorex_araneus
ENSCVAG00000014060	elavl3	99	99.709	ENSSPAG00000000990	elavl3	100	99.709	Stegastes_partitus
ENSCVAG00000014060	elavl3	100	87.193	ENSSSCG00000013617	ELAVL3	100	88.283	Sus_scrofa
ENSCVAG00000014060	elavl3	98	100.000	ENSTRUG00000010719	elavl3	99	100.000	Takifugu_rubripes
ENSCVAG00000014060	elavl3	99	99.162	ENSTNIG00000018572	elavl3	99	99.162	Tetraodon_nigroviridis
ENSCVAG00000014060	elavl3	97	81.902	ENSTBEG00000006133	ELAVL3	99	83.129	Tupaia_belangeri
ENSCVAG00000014060	elavl3	100	86.921	ENSTTRG00000001789	ELAVL3	100	88.011	Tursiops_truncatus
ENSCVAG00000014060	elavl3	97	90.149	ENSUAMG00000000405	ELAVL3	99	88.352	Ursus_americanus
ENSCVAG00000014060	elavl3	98	83.389	ENSUMAG00000019546	ELAVL3	88	84.718	Ursus_maritimus
ENSCVAG00000014060	elavl3	100	88.889	ENSVVUG00000023733	ELAVL3	100	90.000	Vulpes_vulpes
ENSCVAG00000014060	elavl3	99	92.151	ENSXETG00000016741	elavl3	99	92.151	Xenopus_tropicalis
ENSCVAG00000014060	elavl3	100	100.000	ENSXMAG00000018287	elavl3	100	100.000	Xiphophorus_maculatus