EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000014070 (Gene tree)
Gene ID: 107084170
Gene Symbol: htatsf1
Alias: zgc:66252
Full Name: HIV-1 Tat specific factor 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 8067 bases
Position: chrKL652594.1:1179859-1187925
Accession: 107084170
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000027608	RRM_1	PF00076.22	3.4e-15	1	2
ENSCVAP00000027608	RRM_1	PF00076.22	3.4e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000018822	-	2229	XM_015373879	ENSCVAP00000027608	450 (aa)	XP_015229365	UPI000742A992

Gene Model

Click here to download ENSCVAG00000014070's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000014070's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000014070	htatsf1	81	63.492	ENSG00000102241	HTATSF1	100	59.551	Homo_sapiens
ENSCVAG00000014070	htatsf1	99	82.301	ENSAPOG00000009823	htatsf1	100	80.088	Acanthochromis_polyacanthus
ENSCVAG00000014070	htatsf1	99	79.867	ENSACIG00000020459	htatsf1	100	81.195	Amphilophus_citrinellus
ENSCVAG00000014070	htatsf1	99	79.739	ENSAOCG00000020994	htatsf1	100	76.906	Amphiprion_ocellaris
ENSCVAG00000014070	htatsf1	99	80.044	ENSAPEG00000016432	htatsf1	100	79.386	Amphiprion_percula
ENSCVAG00000014070	htatsf1	92	81.340	ENSATEG00000008903	htatsf1	97	76.765	Anabas_testudineus
ENSCVAG00000014070	htatsf1	90	62.175	ENSAPLG00000012401	HTATSF1	99	62.411	Anas_platyrhynchos
ENSCVAG00000014070	htatsf1	86	59.241	ENSACAG00000009346	HTATSF1	99	58.374	Anolis_carolinensis
ENSCVAG00000014070	htatsf1	99	80.310	ENSACLG00000008096	htatsf1	100	80.310	Astatotilapia_calliptera
ENSCVAG00000014070	htatsf1	98	69.783	ENSAMXG00000008387	htatsf1	99	70.499	Astyanax_mexicanus
ENSCVAG00000014070	htatsf1	85	62.755	ENSBTAG00000032711	HTATSF1	50	62.755	Bos_taurus
ENSCVAG00000014070	htatsf1	72	37.879	WBGene00022025	Y65B4A.1	75	37.822	Caenorhabditis_elegans
ENSCVAG00000014070	htatsf1	90	62.500	ENSCAFG00000023294	HTATSF1	50	65.051	Canis_familiaris
ENSCVAG00000014070	htatsf1	85	64.872	ENSTSYG00000028876	HTATSF1	50	64.885	Carlito_syrichta
ENSCVAG00000014070	htatsf1	80	63.587	ENSCCAG00000025329	-	54	64.508	Cebus_capucinus
ENSCVAG00000014070	htatsf1	98	62.500	ENSCPBG00000026092	HTATSF1	98	62.637	Chrysemys_picta_bellii
ENSCVAG00000014070	htatsf1	77	41.951	ENSCING00000005914	-	90	40.625	Ciona_intestinalis
ENSCVAG00000014070	htatsf1	88	43.631	ENSCSAVG00000000371	-	75	42.818	Ciona_savignyi
ENSCVAG00000014070	htatsf1	99	67.603	ENSDARG00000056649	htatsf1	100	67.819	Danio_rerio
ENSCVAG00000014070	htatsf1	82	44.444	FBgn0037081	barc	64	45.304	Drosophila_melanogaster
ENSCVAG00000014070	htatsf1	85	55.303	ENSEBUG00000001534	htatsf1	80	55.303	Eptatretus_burgeri
ENSCVAG00000014070	htatsf1	98	63.871	ENSELUG00000005486	htatsf1	90	65.236	Esox_lucius
ENSCVAG00000014070	htatsf1	90	61.298	ENSFCAG00000031924	HTATSF1	50	63.427	Felis_catus
ENSCVAG00000014070	htatsf1	98	60.087	ENSFALG00000003728	HTATSF1	84	65.657	Ficedula_albicollis
ENSCVAG00000014070	htatsf1	99	89.686	ENSFHEG00000020286	htatsf1	100	89.686	Fundulus_heteroclitus
ENSCVAG00000014070	htatsf1	81	76.776	ENSGMOG00000016444	htatsf1	100	76.776	Gadus_morhua
ENSCVAG00000014070	htatsf1	98	61.354	ENSGALG00000006410	HTATSF1	99	61.572	Gallus_gallus
ENSCVAG00000014070	htatsf1	99	87.387	ENSGAFG00000003041	htatsf1	98	87.387	Gambusia_affinis
ENSCVAG00000014070	htatsf1	99	77.405	ENSGACG00000020459	htatsf1	100	75.615	Gasterosteus_aculeatus
ENSCVAG00000014070	htatsf1	99	80.310	ENSHBUG00000004392	htatsf1	100	80.310	Haplochromis_burtoni
ENSCVAG00000014070	htatsf1	98	70.470	ENSHCOG00000009056	htatsf1	99	70.655	Hippocampus_comes
ENSCVAG00000014070	htatsf1	98	64.286	ENSIPUG00000017828	htatsf1	99	65.042	Ictalurus_punctatus
ENSCVAG00000014070	htatsf1	81	64.171	ENSSTOG00000012505	HTATSF1	51	65.051	Ictidomys_tridecemlineatus
ENSCVAG00000014070	htatsf1	99	85.301	ENSKMAG00000007622	htatsf1	100	83.073	Kryptolebias_marmoratus
ENSCVAG00000014070	htatsf1	99	78.414	ENSLBEG00000001154	htatsf1	100	75.877	Labrus_bergylta
ENSCVAG00000014070	htatsf1	98	61.641	ENSLACG00000015989	HTATSF1	99	61.333	Latimeria_chalumnae
ENSCVAG00000014070	htatsf1	97	45.745	ENSLOCG00000015118	htatsf1	99	45.895	Lepisosteus_oculatus
ENSCVAG00000014070	htatsf1	86	64.304	ENSLAFG00000014307	HTATSF1	56	64.304	Loxodonta_africana
ENSCVAG00000014070	htatsf1	81	63.904	ENSMNEG00000024084	HTATSF1	55	64.141	Macaca_nemestrina
ENSCVAG00000014070	htatsf1	98	78.781	ENSMAMG00000021225	htatsf1	99	78.330	Mastacembelus_armatus
ENSCVAG00000014070	htatsf1	99	80.531	ENSMZEG00005000485	htatsf1	100	80.531	Maylandia_zebra
ENSCVAG00000014070	htatsf1	92	62.645	ENSMGAG00000003558	HTATSF1	97	63.573	Meleagris_gallopavo
ENSCVAG00000014070	htatsf1	81	65.147	ENSMAUG00000007235	Htatsf1	50	65.985	Mesocricetus_auratus
ENSCVAG00000014070	htatsf1	90	61.446	ENSMICG00000009348	HTATSF1	52	62.010	Microcebus_murinus
ENSCVAG00000014070	htatsf1	81	63.807	ENSMOCG00000023007	-	50	64.706	Microtus_ochrogaster
ENSCVAG00000014070	htatsf1	99	79.821	ENSMMOG00000011013	htatsf1	100	78.700	Mola_mola
ENSCVAG00000014070	htatsf1	99	62.092	ENSMODG00000014087	-	98	61.874	Monodelphis_domestica
ENSCVAG00000014070	htatsf1	56	60.821	ENSMODG00000000199	-	99	60.821	Monodelphis_domestica
ENSCVAG00000014070	htatsf1	99	79.065	ENSMALG00000019977	htatsf1	100	78.174	Monopterus_albus
ENSCVAG00000014070	htatsf1	81	64.171	MGP_CAROLIEiJ_G0033094	Htatsf1	50	64.541	Mus_caroli
ENSCVAG00000014070	htatsf1	94	58.974	ENSMLUG00000009234	-	50	63.613	Myotis_lucifugus
ENSCVAG00000014070	htatsf1	81	63.539	ENSNGAG00000017831	Htatsf1	51	64.450	Nannospalax_galili
ENSCVAG00000014070	htatsf1	99	81.195	ENSNBRG00000003818	htatsf1	100	80.531	Neolamprologus_brichardi
ENSCVAG00000014070	htatsf1	91	62.530	ENSMEUG00000004133	-	93	64.286	Notamacropus_eugenii
ENSCVAG00000014070	htatsf1	99	81.858	ENSONIG00000008638	htatsf1	100	80.973	Oreochromis_niloticus
ENSCVAG00000014070	htatsf1	90	60.382	ENSOANG00000011674	-	99	59.427	Ornithorhynchus_anatinus
ENSCVAG00000014070	htatsf1	99	78.634	ENSORLG00000002356	htatsf1	100	77.093	Oryzias_latipes
ENSCVAG00000014070	htatsf1	99	78.289	ENSORLG00020017818	htatsf1	97	76.754	Oryzias_latipes_hni
ENSCVAG00000014070	htatsf1	99	78.097	ENSORLG00015002268	htatsf1	100	77.434	Oryzias_latipes_hsok
ENSCVAG00000014070	htatsf1	99	80.574	ENSOMEG00000007564	htatsf1	100	79.249	Oryzias_melastigma
ENSCVAG00000014070	htatsf1	85	64.286	ENSPPRG00000014209	HTATSF1	50	63.939	Panthera_pardus
ENSCVAG00000014070	htatsf1	98	66.958	ENSPKIG00000024852	htatsf1	100	65.293	Paramormyrops_kingsleyae
ENSCVAG00000014070	htatsf1	72	68.955	ENSPSIG00000010192	HTATSF1	95	68.657	Pelodiscus_sinensis
ENSCVAG00000014070	htatsf1	98	73.778	ENSPMGG00000006172	htatsf1	99	73.333	Periophthalmus_magnuspinnatus
ENSCVAG00000014070	htatsf1	99	56.427	ENSPCIG00000018896	-	99	55.556	Phascolarctos_cinereus
ENSCVAG00000014070	htatsf1	94	61.187	ENSPCIG00000030173	-	89	64.619	Phascolarctos_cinereus
ENSCVAG00000014070	htatsf1	99	88.063	ENSPFOG00000007871	htatsf1	97	88.063	Poecilia_formosa
ENSCVAG00000014070	htatsf1	99	88.288	ENSPLAG00000007532	htatsf1	100	88.288	Poecilia_latipinna
ENSCVAG00000014070	htatsf1	99	88.063	ENSPMEG00000000352	htatsf1	100	88.063	Poecilia_mexicana
ENSCVAG00000014070	htatsf1	99	88.514	ENSPREG00000007811	htatsf1	100	88.514	Poecilia_reticulata
ENSCVAG00000014070	htatsf1	88	56.683	ENSPCAG00000010576	HTATSF1	52	58.398	Procavia_capensis
ENSCVAG00000014070	htatsf1	81	63.369	ENSPCOG00000021823	HTATSF1	50	64.286	Propithecus_coquereli
ENSCVAG00000014070	htatsf1	90	60.386	ENSPVAG00000010281	HTATSF1	54	62.564	Pteropus_vampyrus
ENSCVAG00000014070	htatsf1	99	80.752	ENSPNYG00000016693	htatsf1	100	80.752	Pundamilia_nyererei
ENSCVAG00000014070	htatsf1	98	68.973	ENSPNAG00000006166	htatsf1	99	70.626	Pygocentrus_nattereri
ENSCVAG00000014070	htatsf1	98	60.566	ENSSHAG00000018908	-	98	60.131	Sarcophilus_harrisii
ENSCVAG00000014070	htatsf1	87	64.810	ENSSHAG00000006440	-	98	64.810	Sarcophilus_harrisii
ENSCVAG00000014070	htatsf1	98	61.653	ENSSFOG00015012002	htatsf1	99	62.340	Scleropages_formosus
ENSCVAG00000014070	htatsf1	99	76.638	ENSSMAG00000002970	htatsf1	100	75.983	Scophthalmus_maximus
ENSCVAG00000014070	htatsf1	99	78.747	ENSSDUG00000020002	htatsf1	99	77.703	Seriola_dumerili
ENSCVAG00000014070	htatsf1	99	82.183	ENSSLDG00000016880	htatsf1	100	80.624	Seriola_lalandi_dorsalis
ENSCVAG00000014070	htatsf1	90	58.313	ENSSARG00000005193	HTATSF1	52	60.870	Sorex_araneus
ENSCVAG00000014070	htatsf1	98	59.695	ENSSPUG00000014767	HTATSF1	98	59.825	Sphenodon_punctatus
ENSCVAG00000014070	htatsf1	99	81.538	ENSSPAG00000000732	htatsf1	100	79.341	Stegastes_partitus
ENSCVAG00000014070	htatsf1	81	64.171	ENSSSCG00000023062	HTATSF1	55	64.541	Sus_scrofa
ENSCVAG00000014070	htatsf1	98	60.566	ENSTGUG00000002099	HTATSF1	99	60.784	Taeniopygia_guttata
ENSCVAG00000014070	htatsf1	99	76.351	ENSTRUG00000013383	htatsf1	100	75.000	Takifugu_rubripes
ENSCVAG00000014070	htatsf1	99	75.056	ENSTNIG00000016140	htatsf1	99	75.450	Tetraodon_nigroviridis
ENSCVAG00000014070	htatsf1	78	63.128	ENSTTRG00000002269	HTATSF1	58	63.128	Tursiops_truncatus
ENSCVAG00000014070	htatsf1	90	61.446	ENSUAMG00000012048	HTATSF1	50	63.939	Ursus_americanus
ENSCVAG00000014070	htatsf1	98	59.251	ENSXETG00000019749	htatsf1	85	58.590	Xenopus_tropicalis
ENSCVAG00000014070	htatsf1	99	81.838	ENSXCOG00000006912	htatsf1	97	85.548	Xiphophorus_couchianus
ENSCVAG00000014070	htatsf1	99	87.387	ENSXMAG00000000490	htatsf1	100	87.387	Xiphophorus_maculatus