EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000014097 (Gene tree)
Gene ID: 107086394
Gene Symbol: hnrnph1
Alias: zgc:77712
Full Name: heterogeneous nuclear ribonucleoprotein H1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 10010 bases
Position: chrKL652508.1:846139-856148
Accession: 107086394
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000011771	zf-RNPHF	PF08080.12	6.1e-09	1	1
ENSCVAP00000011771	RRM_1	PF00076.22	2e-30	1	2
ENSCVAP00000011771	RRM_1	PF00076.22	2e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000018836	-	3817	XM_015377299	ENSCVAP00000011771	406 (aa)	XP_015232785	UPI0007429AA3

Gene Model

Click here to download ENSCVAG00000014097's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000014097's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000014097	hnrnph1	80	43.077	ENSCVAG00000004476	grsf1	77	43.519
ENSCVAG00000014097	hnrnph1	86	32.857	ENSCVAG00000004170	esrp2	53	32.857
ENSCVAG00000014097	hnrnph1	93	58.760	ENSCVAG00000010461	HNRNPH3	99	55.122

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000014097	hnrnph1	100	96.314	ENSAPOG00000016614	hnrnph1	100	96.314	Acanthochromis_polyacanthus
ENSCVAG00000014097	hnrnph1	99	95.745	ENSACIG00000008964	hnrnph1	98	95.745	Amphilophus_citrinellus
ENSCVAG00000014097	hnrnph1	100	96.806	ENSAOCG00000008372	hnrnph1	100	96.806	Amphiprion_ocellaris
ENSCVAG00000014097	hnrnph1	100	96.560	ENSAPEG00000012980	hnrnph1	100	96.560	Amphiprion_percula
ENSCVAG00000014097	hnrnph1	100	96.560	ENSATEG00000002792	hnrnph1	100	96.560	Anabas_testudineus
ENSCVAG00000014097	hnrnph1	99	70.705	ENSACAG00000016323	-	91	74.820	Anolis_carolinensis
ENSCVAG00000014097	hnrnph1	91	92.958	ENSACLG00000003313	hnrnph1	97	92.958	Astatotilapia_calliptera
ENSCVAG00000014097	hnrnph1	99	82.801	ENSAMXG00000030703	hnrnph1l	84	82.310	Astyanax_mexicanus
ENSCVAG00000014097	hnrnph1	100	83.010	ENSAMXG00000002483	hnrnph1	99	87.863	Astyanax_mexicanus
ENSCVAG00000014097	hnrnph1	100	92.665	ENSCSEG00000015891	hnrnph1	100	93.888	Cynoglossus_semilaevis
ENSCVAG00000014097	hnrnph1	95	87.147	ENSDARG00000005551	hnrnph1l	99	84.767	Danio_rerio
ENSCVAG00000014097	hnrnph1	93	87.105	ENSDARG00000040881	hnrnph1	94	87.632	Danio_rerio
ENSCVAG00000014097	hnrnph1	100	85.545	ENSELUG00000006715	hnrnph1	100	82.938	Esox_lucius
ENSCVAG00000014097	hnrnph1	96	84.737	ENSELUG00000021437	-	99	87.105	Esox_lucius
ENSCVAG00000014097	hnrnph1	100	96.059	ENSFHEG00000008474	hnrnph1	100	96.059	Fundulus_heteroclitus
ENSCVAG00000014097	hnrnph1	94	87.786	ENSGMOG00000006782	hnrnph1	97	87.786	Gadus_morhua
ENSCVAG00000014097	hnrnph1	100	97.291	ENSGAFG00000006280	hnrnph1	100	97.291	Gambusia_affinis
ENSCVAG00000014097	hnrnph1	100	90.663	ENSGACG00000018352	hnrnph1	99	89.563	Gasterosteus_aculeatus
ENSCVAG00000014097	hnrnph1	91	92.958	ENSHBUG00000010547	hnrnph1	98	92.958	Haplochromis_burtoni
ENSCVAG00000014097	hnrnph1	100	83.373	ENSHCOG00000004513	hnrnph1	100	86.936	Hippocampus_comes
ENSCVAG00000014097	hnrnph1	100	81.553	ENSIPUG00000018262	hnrnph1	100	83.981	Ictalurus_punctatus
ENSCVAG00000014097	hnrnph1	95	83.805	ENSIPUG00000024047	hnrnph1l	96	81.818	Ictalurus_punctatus
ENSCVAG00000014097	hnrnph1	100	94.132	ENSKMAG00000018802	hnrnph1	100	93.888	Kryptolebias_marmoratus
ENSCVAG00000014097	hnrnph1	100	94.349	ENSLBEG00000027811	hnrnph1	100	95.332	Labrus_bergylta
ENSCVAG00000014097	hnrnph1	92	82.134	ENSLOCG00000012510	hnrnph1	91	81.638	Lepisosteus_oculatus
ENSCVAG00000014097	hnrnph1	99	54.186	ENSMMUG00000017392	-	89	54.750	Macaca_mulatta
ENSCVAG00000014097	hnrnph1	99	53.917	ENSMNEG00000030544	-	89	54.750	Macaca_nemestrina
ENSCVAG00000014097	hnrnph1	92	90.054	ENSMAMG00000011478	hnrnph1	99	90.054	Mastacembelus_armatus
ENSCVAG00000014097	hnrnph1	100	96.305	ENSMZEG00005009791	hnrnph1	100	96.305	Maylandia_zebra
ENSCVAG00000014097	hnrnph1	93	92.632	ENSMMOG00000009064	hnrnph1	98	92.368	Mola_mola
ENSCVAG00000014097	hnrnph1	74	52.537	ENSMODG00000002200	-	99	51.343	Monodelphis_domestica
ENSCVAG00000014097	hnrnph1	85	92.758	ENSMALG00000003999	hnrnph1	99	92.758	Monopterus_albus
ENSCVAG00000014097	hnrnph1	91	92.958	ENSNBRG00000015406	hnrnph1	98	92.958	Neolamprologus_brichardi
ENSCVAG00000014097	hnrnph1	100	96.305	ENSONIG00000017754	hnrnph1	100	96.305	Oreochromis_niloticus
ENSCVAG00000014097	hnrnph1	100	92.978	ENSORLG00000006932	hnrnph1	100	93.947	Oryzias_latipes
ENSCVAG00000014097	hnrnph1	100	92.736	ENSORLG00020007881	hnrnph1	100	93.705	Oryzias_latipes_hni
ENSCVAG00000014097	hnrnph1	100	92.978	ENSORLG00015005306	hnrnph1	100	93.947	Oryzias_latipes_hsok
ENSCVAG00000014097	hnrnph1	100	96.078	ENSOMEG00000009827	hnrnph1	100	96.078	Oryzias_melastigma
ENSCVAG00000014097	hnrnph1	100	87.531	ENSPKIG00000018203	hnrnph1l	100	85.819	Paramormyrops_kingsleyae
ENSCVAG00000014097	hnrnph1	93	82.090	ENSPKIG00000009532	-	93	81.095	Paramormyrops_kingsleyae
ENSCVAG00000014097	hnrnph1	100	91.646	ENSPMGG00000012151	hnrnph1	100	92.629	Periophthalmus_magnuspinnatus
ENSCVAG00000014097	hnrnph1	100	97.291	ENSPFOG00000004097	hnrnph1	100	97.291	Poecilia_formosa
ENSCVAG00000014097	hnrnph1	100	97.291	ENSPLAG00000011771	hnrnph1	100	97.291	Poecilia_latipinna
ENSCVAG00000014097	hnrnph1	100	97.537	ENSPMEG00000019446	hnrnph1	100	97.537	Poecilia_mexicana
ENSCVAG00000014097	hnrnph1	100	97.537	ENSPREG00000005780	hnrnph1	100	97.537	Poecilia_reticulata
ENSCVAG00000014097	hnrnph1	100	96.305	ENSPNYG00000000204	hnrnph1	100	96.305	Pundamilia_nyererei
ENSCVAG00000014097	hnrnph1	99	83.863	ENSPNAG00000002784	hnrnph1l	99	82.801	Pygocentrus_nattereri
ENSCVAG00000014097	hnrnph1	100	82.524	ENSPNAG00000000439	hnrnph1	100	84.709	Pygocentrus_nattereri
ENSCVAG00000014097	hnrnph1	97	89.646	ENSSFOG00015022796	hnrnph1l	100	87.105	Scleropages_formosus
ENSCVAG00000014097	hnrnph1	95	88.205	ENSSFOG00015016055	-	94	88.451	Scleropages_formosus
ENSCVAG00000014097	hnrnph1	96	90.176	ENSSMAG00000007820	hnrnph1	96	92.651	Scophthalmus_maximus
ENSCVAG00000014097	hnrnph1	100	96.806	ENSSDUG00000008785	hnrnph1	100	96.806	Seriola_dumerili
ENSCVAG00000014097	hnrnph1	100	96.806	ENSSLDG00000010685	hnrnph1	100	96.806	Seriola_lalandi_dorsalis
ENSCVAG00000014097	hnrnph1	100	96.069	ENSSPAG00000009921	hnrnph1	100	96.069	Stegastes_partitus
ENSCVAG00000014097	hnrnph1	100	94.089	ENSTRUG00000020069	hnrnph1	100	94.581	Takifugu_rubripes
ENSCVAG00000014097	hnrnph1	99	71.493	ENSXETG00000018321	hnrnph1	91	76.010	Xenopus_tropicalis
ENSCVAG00000014097	hnrnph1	93	93.606	ENSXCOG00000009133	hnrnph1	97	93.606	Xiphophorus_couchianus
ENSCVAG00000014097	hnrnph1	93	97.340	ENSXMAG00000021332	hnrnph1	99	97.340	Xiphophorus_maculatus