EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000014193 (Gene tree)
Gene ID: 107103549
Gene Symbol: SNRPN
Alias: HCERN3|PWCR|RT-LI|SM-D|SMN|SNRNP-N|SNURF-SNRPN
Full Name: small nuclear ribonucleoprotein-associated protein B'
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 6132 bases
Position: chrKL653976.1:124863-130994
Accession: 107103549
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000011861	LSM	PF01423.22	6.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000018962	SNRPN-201	1669	XM_015403284	ENSCVAP00000011861	241 (aa)	XP_015258770	UPI000742C973

Gene Model

Click here to download ENSCVAG00000014193's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000014193's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000014193	SNRPN	70	92.899	ENSG00000128739	SNRPN	100	96.610	Homo_sapiens
ENSCVAG00000014193	SNRPN	69	92.814	ENSAMEG00000007034	SNRPN	70	92.442	Ailuropoda_melanoleuca
ENSCVAG00000014193	SNRPN	96	77.186	ENSANAG00000034241	SNRPN	72	92.486	Aotus_nancymaae
ENSCVAG00000014193	SNRPN	75	90.710	ENSBTAG00000008251	SNRPN	74	92.121	Bos_taurus
ENSCVAG00000014193	SNRPN	69	92.857	ENSCJAG00000003759	-	72	92.486	Callithrix_jacchus
ENSCVAG00000014193	SNRPN	69	92.262	ENSCJAG00000042622	-	72	91.908	Callithrix_jacchus
ENSCVAG00000014193	SNRPN	69	92.857	ENSCAFG00000010127	SNRPN	72	92.486	Canis_familiaris
ENSCVAG00000014193	SNRPN	69	92.857	ENSCAFG00020024075	SNRPN	72	92.486	Canis_lupus_dingo
ENSCVAG00000014193	SNRPN	75	90.710	ENSCHIG00000017477	SNRPN	75	92.486	Capra_hircus
ENSCVAG00000014193	SNRPN	69	92.857	ENSTSYG00000005248	SNRPN	72	92.486	Carlito_syrichta
ENSCVAG00000014193	SNRPN	69	92.857	ENSCAPG00000003047	SNRPN	72	92.486	Cavia_aperea
ENSCVAG00000014193	SNRPN	69	92.857	ENSCPOG00000020270	SNRPN	72	92.486	Cavia_porcellus
ENSCVAG00000014193	SNRPN	69	92.857	ENSCCAG00000024231	SNRPN	72	92.486	Cebus_capucinus
ENSCVAG00000014193	SNRPN	69	92.857	ENSCATG00000032518	SNRPN	72	92.486	Cercocebus_atys
ENSCVAG00000014193	SNRPN	69	92.857	ENSCLAG00000011376	SNRPN	72	92.486	Chinchilla_lanigera
ENSCVAG00000014193	SNRPN	69	92.857	ENSCSAG00000006406	SNRPN	72	92.486	Chlorocebus_sabaeus
ENSCVAG00000014193	SNRPN	67	92.593	ENSCHOG00000001846	SNRPN	63	92.216	Choloepus_hoffmanni
ENSCVAG00000014193	SNRPN	69	92.857	ENSCANG00000041156	SNRPN	72	92.486	Colobus_angolensis_palliatus
ENSCVAG00000014193	SNRPN	69	92.262	ENSCGRG00001004136	Snrpn	72	91.908	Cricetulus_griseus_chok1gshd
ENSCVAG00000014193	SNRPN	69	92.857	ENSCGRG00000001621	Snrpn	72	92.486	Cricetulus_griseus_crigri
ENSCVAG00000014193	SNRPN	69	92.216	ENSDNOG00000037060	SNRPN	70	91.860	Dasypus_novemcinctus
ENSCVAG00000014193	SNRPN	69	92.857	ENSDORG00000004527	Snrpn	72	92.486	Dipodomys_ordii
ENSCVAG00000014193	SNRPN	69	92.857	ENSEASG00005017871	SNRPN	72	92.486	Equus_asinus_asinus
ENSCVAG00000014193	SNRPN	69	92.857	ENSECAG00000018148	SNRPN	72	92.486	Equus_caballus
ENSCVAG00000014193	SNRPN	69	92.216	ENSEEUG00000007440	-	72	91.860	Erinaceus_europaeus
ENSCVAG00000014193	SNRPN	69	92.857	ENSFCAG00000022298	-	73	92.486	Felis_catus
ENSCVAG00000014193	SNRPN	69	92.857	ENSFDAG00000016578	-	72	92.486	Fukomys_damarensis
ENSCVAG00000014193	SNRPN	75	80.663	ENSGMOG00000018161	SNRPN	76	80.814	Gadus_morhua
ENSCVAG00000014193	SNRPN	58	79.856	ENSGGOG00000024469	-	69	81.022	Gorilla_gorilla
ENSCVAG00000014193	SNRPN	69	92.857	ENSGGOG00000003988	SNRPN	72	92.486	Gorilla_gorilla
ENSCVAG00000014193	SNRPN	86	83.254	ENSHGLG00000019812	-	72	87.791	Heterocephalus_glaber_female
ENSCVAG00000014193	SNRPN	98	72.034	ENSHGLG00000020936	-	77	79.330	Heterocephalus_glaber_female
ENSCVAG00000014193	SNRPN	69	92.857	ENSHGLG00000011924	SNRPN	72	92.486	Heterocephalus_glaber_female
ENSCVAG00000014193	SNRPN	99	73.333	ENSHGLG00000002327	-	70	76.879	Heterocephalus_glaber_female
ENSCVAG00000014193	SNRPN	86	83.254	ENSHGLG00100021056	-	72	87.791	Heterocephalus_glaber_male
ENSCVAG00000014193	SNRPN	69	92.857	ENSHGLG00100016559	SNRPN	72	92.486	Heterocephalus_glaber_male
ENSCVAG00000014193	SNRPN	99	74.477	ENSHGLG00100004881	-	70	79.070	Heterocephalus_glaber_male
ENSCVAG00000014193	SNRPN	69	92.857	ENSSTOG00000001339	SNRPN	72	92.486	Ictidomys_tridecemlineatus
ENSCVAG00000014193	SNRPN	69	92.814	ENSLAFG00000009458	SNRPN	72	91.279	Loxodonta_africana
ENSCVAG00000014193	SNRPN	69	92.857	ENSMFAG00000042235	SNRPN	72	92.486	Macaca_fascicularis
ENSCVAG00000014193	SNRPN	69	92.857	ENSMMUG00000023139	SNURF	72	92.486	Macaca_mulatta
ENSCVAG00000014193	SNRPN	69	92.857	ENSMNEG00000031291	SNRPN	72	92.486	Macaca_nemestrina
ENSCVAG00000014193	SNRPN	69	92.857	ENSMLEG00000038837	SNRPN	72	92.486	Mandrillus_leucophaeus
ENSCVAG00000014193	SNRPN	61	89.796	ENSMGAG00000008696	SNRPN	72	85.465	Meleagris_gallopavo
ENSCVAG00000014193	SNRPN	69	92.857	ENSMAUG00000000051	Snrpn	76	92.486	Mesocricetus_auratus
ENSCVAG00000014193	SNRPN	69	92.857	ENSMICG00000042356	SNRPN	72	92.486	Microcebus_murinus
ENSCVAG00000014193	SNRPN	69	92.857	ENSMOCG00000015350	Snrpn	72	92.486	Microtus_ochrogaster
ENSCVAG00000014193	SNRPN	69	93.452	ENSMODG00000013926	-	72	91.908	Monodelphis_domestica
ENSCVAG00000014193	SNRPN	69	92.857	MGP_CAROLIEiJ_G0029815	Snrpn	72	92.486	Mus_caroli
ENSCVAG00000014193	SNRPN	69	92.857	ENSMUSG00000102252	Snrpn	72	92.486	Mus_musculus
ENSCVAG00000014193	SNRPN	69	92.857	MGP_PahariEiJ_G0013040	Snrpn	72	92.486	Mus_pahari
ENSCVAG00000014193	SNRPN	69	92.857	MGP_SPRETEiJ_G0030918	Snrpn	72	92.486	Mus_spretus
ENSCVAG00000014193	SNRPN	74	56.906	ENSMPUG00000007115	-	64	68.310	Mustela_putorius_furo
ENSCVAG00000014193	SNRPN	69	92.857	ENSMPUG00000014638	-	72	92.486	Mustela_putorius_furo
ENSCVAG00000014193	SNRPN	69	92.814	ENSMLUG00000023361	-	70	92.442	Myotis_lucifugus
ENSCVAG00000014193	SNRPN	59	67.832	ENSMLUG00000024428	-	62	67.407	Myotis_lucifugus
ENSCVAG00000014193	SNRPN	66	59.748	ENSMLUG00000025849	-	74	60.127	Myotis_lucifugus
ENSCVAG00000014193	SNRPN	69	92.857	ENSNGAG00000000181	Snrpn	72	92.486	Nannospalax_galili
ENSCVAG00000014193	SNRPN	88	70.698	ENSNLEG00000001376	SNRPN	81	66.327	Nomascus_leucogenys
ENSCVAG00000014193	SNRPN	96	75.000	ENSODEG00000016065	-	64	90.071	Octodon_degus
ENSCVAG00000014193	SNRPN	69	92.857	ENSODEG00000013478	-	72	92.486	Octodon_degus
ENSCVAG00000014193	SNRPN	69	92.262	ENSODEG00000019708	-	73	91.908	Octodon_degus
ENSCVAG00000014193	SNRPN	69	92.262	ENSODEG00000020110	-	72	91.908	Octodon_degus
ENSCVAG00000014193	SNRPN	88	85.648	ENSOCUG00000003532	-	72	92.486	Oryctolagus_cuniculus
ENSCVAG00000014193	SNRPN	100	98.340	ENSORLG00020007490	SNRPN	100	98.340	Oryzias_latipes_hni
ENSCVAG00000014193	SNRPN	100	98.340	ENSORLG00015003332	SNRPN	100	98.340	Oryzias_latipes_hsok
ENSCVAG00000014193	SNRPN	100	97.925	ENSOMEG00000002066	SNRPN	100	97.925	Oryzias_melastigma
ENSCVAG00000014193	SNRPN	69	92.857	ENSOGAG00000007392	SNRPN	72	92.486	Otolemur_garnettii
ENSCVAG00000014193	SNRPN	75	90.710	ENSOARG00000009080	SNRPN	72	92.486	Ovis_aries
ENSCVAG00000014193	SNRPN	69	92.857	ENSPPAG00000027650	SNRPN	72	92.486	Pan_paniscus
ENSCVAG00000014193	SNRPN	97	61.966	ENSPPAG00000034049	-	65	76.923	Pan_paniscus
ENSCVAG00000014193	SNRPN	69	92.857	ENSPPRG00000019878	-	72	92.486	Panthera_pardus
ENSCVAG00000014193	SNRPN	85	59.709	ENSPPRG00000006957	-	75	66.026	Panthera_pardus
ENSCVAG00000014193	SNRPN	61	96.622	ENSPTIG00000004537	SNRPN	72	92.486	Panthera_tigris_altaica
ENSCVAG00000014193	SNRPN	69	92.857	ENSPTRG00000006826	SNRPN	72	92.486	Pan_troglodytes
ENSCVAG00000014193	SNRPN	97	62.393	ENSPTRG00000052400	-	65	77.622	Pan_troglodytes
ENSCVAG00000014193	SNRPN	69	92.857	ENSPANG00000020142	SNRPN	72	92.486	Papio_anubis
ENSCVAG00000014193	SNRPN	69	77.381	ENSPEMG00000013920	-	70	79.191	Peromyscus_maniculatus_bairdii
ENSCVAG00000014193	SNRPN	69	90.476	ENSPEMG00000020979	-	72	90.173	Peromyscus_maniculatus_bairdii
ENSCVAG00000014193	SNRPN	69	92.857	ENSPEMG00000012911	-	72	92.486	Peromyscus_maniculatus_bairdii
ENSCVAG00000014193	SNRPN	69	92.216	ENSPCIG00000004699	-	55	90.698	Phascolarctos_cinereus
ENSCVAG00000014193	SNRPN	100	99.170	ENSPMEG00000020674	SNRPN	100	99.170	Poecilia_mexicana
ENSCVAG00000014193	SNRPN	69	92.857	ENSPPYG00000006269	SNURF	72	92.486	Pongo_abelii
ENSCVAG00000014193	SNRPN	69	92.857	ENSPCOG00000014231	SNRPN	72	92.486	Propithecus_coquereli
ENSCVAG00000014193	SNRPN	69	92.857	ENSRNOG00000059764	Snrpn	72	92.486	Rattus_norvegicus
ENSCVAG00000014193	SNRPN	69	92.857	ENSRBIG00000041765	SNRPN	72	92.486	Rhinopithecus_bieti
ENSCVAG00000014193	SNRPN	69	92.857	ENSRROG00000035157	SNRPN	72	92.486	Rhinopithecus_roxellana
ENSCVAG00000014193	SNRPN	69	92.857	ENSSBOG00000000110	-	72	92.486	Saimiri_boliviensis_boliviensis
ENSCVAG00000014193	SNRPN	75	90.164	ENSSBOG00000024929	-	72	91.908	Saimiri_boliviensis_boliviensis
ENSCVAG00000014193	SNRPN	69	91.667	ENSSHAG00000010257	-	71	91.329	Sarcophilus_harrisii
ENSCVAG00000014193	SNRPN	98	69.038	ENSSARG00000000072	SNRPN	99	69.038	Sorex_araneus
ENSCVAG00000014193	SNRPN	69	92.857	ENSSSCG00000028124	SNRPN	75	92.486	Sus_scrofa
ENSCVAG00000014193	SNRPN	75	90.710	ENSTTRG00000010966	SNRPN	64	92.486	Tursiops_truncatus
ENSCVAG00000014193	SNRPN	67	92.593	ENSUAMG00000016284	SNRPN	58	92.216	Ursus_americanus
ENSCVAG00000014193	SNRPN	69	92.857	ENSUMAG00000025589	SNRPN	72	92.486	Ursus_maritimus
ENSCVAG00000014193	SNRPN	69	92.857	ENSVVUG00000017971	SNRPN	71	92.486	Vulpes_vulpes