EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000014324 (Gene tree)
Gene ID: 107085860
Gene Symbol: twistnb
Alias: -
Full Name: TWIST neighbor
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 5302 bases
Position: chrKL652635.1:1018995-1024296
Accession: 107085860
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000011966	SHS2_Rpb7-N	PF03876.17	2.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000019082	-	1622	XM_015376470	ENSCVAP00000011966	376 (aa)	XP_015231956	UPI000742BE67

Gene Model

Click here to download ENSCVAG00000014324's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000014324's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000014324	twistnb	100	60.204	ENSAPOG00000011796	twistnb	92	64.305	Acanthochromis_polyacanthus
ENSCVAG00000014324	twistnb	99	57.812	ENSACIG00000020400	twistnb	94	59.290	Amphilophus_citrinellus
ENSCVAG00000014324	twistnb	94	64.560	ENSAOCG00000024200	twistnb	92	64.835	Amphiprion_ocellaris
ENSCVAG00000014324	twistnb	94	65.385	ENSAPEG00000016750	twistnb	92	65.659	Amphiprion_percula
ENSCVAG00000014324	twistnb	97	63.926	ENSATEG00000017956	twistnb	94	59.151	Anabas_testudineus
ENSCVAG00000014324	twistnb	52	54.680	ENSANAG00000026418	TWISTNB	60	54.680	Aotus_nancymaae
ENSCVAG00000014324	twistnb	95	55.956	ENSACLG00000022280	twistnb	87	60.326	Astatotilapia_calliptera
ENSCVAG00000014324	twistnb	60	56.579	ENSAMXG00000035868	twistnb	77	51.698	Astyanax_mexicanus
ENSCVAG00000014324	twistnb	57	53.881	ENSBTAG00000006721	TWISTNB	67	53.125	Bos_taurus
ENSCVAG00000014324	twistnb	52	55.665	ENSCJAG00000001148	TWISTNB	60	55.665	Callithrix_jacchus
ENSCVAG00000014324	twistnb	50	57.895	ENSCAFG00000002511	TWISTNB	55	57.895	Canis_familiaris
ENSCVAG00000014324	twistnb	50	57.895	ENSCAFG00020002140	TWISTNB	52	57.895	Canis_lupus_dingo
ENSCVAG00000014324	twistnb	84	43.260	ENSCHIG00000024078	TWISTNB	64	53.241	Capra_hircus
ENSCVAG00000014324	twistnb	90	42.571	ENSCPOG00000031651	TWISTNB	91	40.176	Cavia_porcellus
ENSCVAG00000014324	twistnb	52	57.143	ENSCLAG00000012696	TWISTNB	60	57.143	Chinchilla_lanigera
ENSCVAG00000014324	twistnb	75	45.390	ENSCPBG00000000367	TWISTNB	67	52.558	Chrysemys_picta_bellii
ENSCVAG00000014324	twistnb	62	55.794	ENSDARG00000024416	twistnb	94	45.067	Danio_rerio
ENSCVAG00000014324	twistnb	75	42.568	ENSDNOG00000006438	-	72	49.383	Dasypus_novemcinctus
ENSCVAG00000014324	twistnb	82	42.492	ENSECAG00000014563	TWISTNB	55	57.812	Equus_caballus
ENSCVAG00000014324	twistnb	99	50.396	ENSELUG00000000098	TWISTNB	70	60.853	Esox_lucius
ENSCVAG00000014324	twistnb	100	76.923	ENSFHEG00000013318	twistnb	100	76.923	Fundulus_heteroclitus
ENSCVAG00000014324	twistnb	100	72.396	ENSGAFG00000018309	twistnb	100	75.989	Gambusia_affinis
ENSCVAG00000014324	twistnb	73	60.507	ENSGACG00000006425	twistnb	75	73.171	Gasterosteus_aculeatus
ENSCVAG00000014324	twistnb	95	55.956	ENSHBUG00000020155	twistnb	87	60.326	Haplochromis_burtoni
ENSCVAG00000014324	twistnb	66	67.059	ENSHCOG00000010590	twistnb	63	65.283	Hippocampus_comes
ENSCVAG00000014324	twistnb	88	45.322	ENSIPUG00000004117	twistnb	56	58.454	Ictalurus_punctatus
ENSCVAG00000014324	twistnb	99	66.492	ENSKMAG00000001591	twistnb	96	67.204	Kryptolebias_marmoratus
ENSCVAG00000014324	twistnb	95	60.383	ENSLBEG00000024225	twistnb	67	72.157	Labrus_bergylta
ENSCVAG00000014324	twistnb	52	56.158	ENSLAFG00000008755	TWISTNB	61	56.158	Loxodonta_africana
ENSCVAG00000014324	twistnb	95	55.956	ENSMZEG00005007561	twistnb	87	60.326	Maylandia_zebra
ENSCVAG00000014324	twistnb	67	65.152	ENSMMOG00000020085	twistnb	68	65.152	Mola_mola
ENSCVAG00000014324	twistnb	66	63.670	ENSMALG00000016407	twistnb	93	56.499	Monopterus_albus
ENSCVAG00000014324	twistnb	95	56.510	ENSNBRG00000008652	twistnb	93	57.065	Neolamprologus_brichardi
ENSCVAG00000014324	twistnb	54	55.502	ENSODEG00000007222	TWISTNB	69	51.709	Octodon_degus
ENSCVAG00000014324	twistnb	97	63.061	ENSORLG00000004005	twistnb	86	60.158	Oryzias_latipes
ENSCVAG00000014324	twistnb	99	62.051	ENSORLG00020002579	twistnb	99	60.411	Oryzias_latipes_hni
ENSCVAG00000014324	twistnb	99	63.333	ENSORLG00015013403	twistnb	88	60.411	Oryzias_latipes_hsok
ENSCVAG00000014324	twistnb	84	43.260	ENSOARG00000009803	TWISTNB	63	53.241	Ovis_aries
ENSCVAG00000014324	twistnb	60	57.709	ENSPKIG00000025635	twistnb	62	57.709	Paramormyrops_kingsleyae
ENSCVAG00000014324	twistnb	95	58.516	ENSPMGG00000019023	twistnb	59	73.214	Periophthalmus_magnuspinnatus
ENSCVAG00000014324	twistnb	75	43.643	ENSPCOG00000017601	TWISTNB	55	58.696	Propithecus_coquereli
ENSCVAG00000014324	twistnb	95	55.956	ENSPNYG00000002674	twistnb	93	60.054	Pundamilia_nyererei
ENSCVAG00000014324	twistnb	50	59.794	ENSPNAG00000011956	twistnb	53	59.794	Pygocentrus_nattereri
ENSCVAG00000014324	twistnb	100	60.567	ENSSMAG00000012792	twistnb	93	61.853	Scophthalmus_maximus
ENSCVAG00000014324	twistnb	95	65.123	ENSSDUG00000007038	twistnb	93	65.668	Seriola_dumerili
ENSCVAG00000014324	twistnb	94	65.374	ENSSPAG00000005871	twistnb	92	65.289	Stegastes_partitus
ENSCVAG00000014324	twistnb	89	54.360	ENSTNIG00000017778	twistnb	60	72.362	Tetraodon_nigroviridis
ENSCVAG00000014324	twistnb	82	44.728	ENSTBEG00000003554	TWISTNB	54	59.239	Tupaia_belangeri
ENSCVAG00000014324	twistnb	50	58.421	ENSVVUG00000008386	TWISTNB	56	58.421	Vulpes_vulpes
ENSCVAG00000014324	twistnb	97	74.114	ENSXCOG00000020199	twistnb	96	75.068	Xiphophorus_couchianus