EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCVAG00000014378 (Gene tree)
Gene ID
107096006
Gene Symbol
YTHDF1
Alias
C20orf21|FLJ20391
Full Name
YTH domain-containing family protein 1-like
Gene Type
protein_coding
Species
Cyprinodon_variegatus
Status
putative
Strand
Plus strand
Length
10990 bases
Position
chrKL653091.1:343306-354295
Accession
107096006
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCVAP00000027759YTHPF04146.155.3e-4111
ENSCVAP00000012003YTHPF04146.156.3e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCVAT00000019117YTHDF1-2011632-ENSCVAP00000027759543 (aa)--
ENSCVAT00000019150YTHDF1-2025134XM_015392445ENSCVAP00000012003615 (aa)XP_015247931UPI000742BF24
Gene Model
Click here to download ENSCVAG00000014378's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000014378's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCVAG00000014378YTHDF19880.483ENSCVAG00000017940ythdf19480.418
ENSCVAG00000014378YTHDF19962.811ENSCVAG00000018114ythdf39759.900
ENSCVAG00000014378YTHDF19961.141ENSCVAG00000015233ythdf29958.717
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCVAG00000014378YTHDF19975.000ENSG00000149658YTHDF19773.036Homo_sapiens
ENSCVAG00000014378YTHDF19681.284ENSAPOG00000004358ythdf19978.284Acanthochromis_polyacanthus
ENSCVAG00000014378YTHDF110096.278ENSAPOG00000010796YTHDF110096.278Acanthochromis_polyacanthus
ENSCVAG00000014378YTHDF19974.327ENSAMEG00000017323YTHDF19673.929Ailuropoda_melanoleuca
ENSCVAG00000014378YTHDF19993.796ENSACIG00000020083YTHDF19793.431Amphilophus_citrinellus
ENSCVAG00000014378YTHDF19681.121ENSACIG00000011264ythdf19480.855Amphilophus_citrinellus
ENSCVAG00000014378YTHDF19682.056ENSAOCG00000022251ythdf19582.276Amphiprion_ocellaris
ENSCVAG00000014378YTHDF110094.822ENSAOCG00000012567YTHDF110093.355Amphiprion_ocellaris
ENSCVAG00000014378YTHDF19977.955ENSAPEG00000021878ythdf19977.476Amphiprion_percula
ENSCVAG00000014378YTHDF110096.117ENSAPEG00000008750YTHDF110096.117Amphiprion_percula
ENSCVAG00000014378YTHDF19680.863ENSATEG00000023840ythdf19878.723Anabas_testudineus
ENSCVAG00000014378YTHDF110096.117ENSATEG00000005996YTHDF110096.117Anabas_testudineus
ENSCVAG00000014378YTHDF19976.114ENSAPLG00000005985YTHDF19775.401Anas_platyrhynchos
ENSCVAG00000014378YTHDF19975.623ENSACAG00000005560YTHDF19776.703Anolis_carolinensis
ENSCVAG00000014378YTHDF19961.922ENSANAG00000021022-10059.061Aotus_nancymaae
ENSCVAG00000014378YTHDF19974.286ENSANAG00000034786-10072.676Aotus_nancymaae
ENSCVAG00000014378YTHDF110093.019ENSACLG00000025518YTHDF110093.182Astatotilapia_calliptera
ENSCVAG00000014378YTHDF19974.464ENSBTAG00000010383YTHDF110072.571Bos_taurus
ENSCVAG00000014378YTHDF19974.286ENSCJAG00000010056YTHDF19773.036Callithrix_jacchus
ENSCVAG00000014378YTHDF19374.187ENSCAFG00000012772YTHDF19973.664Canis_familiaris
ENSCVAG00000014378YTHDF19374.187ENSCAFG00020001214YTHDF19973.664Canis_lupus_dingo
ENSCVAG00000014378YTHDF19973.571ENSCHIG00000026494YTHDF19872.581Capra_hircus
ENSCVAG00000014378YTHDF19973.477ENSTSYG00000033436YTHDF19773.214Carlito_syrichta
ENSCVAG00000014378YTHDF19972.352ENSCAPG00000002544YTHDF19372.272Cavia_aperea
ENSCVAG00000014378YTHDF19973.429ENSCPOG00000010202YTHDF19773.345Cavia_porcellus
ENSCVAG00000014378YTHDF19973.345ENSCCAG00000024650YTHDF19772.857Cebus_capucinus
ENSCVAG00000014378YTHDF19974.821ENSCATG00000033272YTHDF19773.393Cercocebus_atys
ENSCVAG00000014378YTHDF19974.643ENSCLAG00000005989YTHDF19873.132Chinchilla_lanigera
ENSCVAG00000014378YTHDF19974.821ENSCSAG00000016266YTHDF19773.393Chlorocebus_sabaeus
ENSCVAG00000014378YTHDF19976.377ENSCPBG00000027183YTHDF19775.492Chrysemys_picta_bellii
ENSCVAG00000014378YTHDF19974.643ENSCANG00000029082YTHDF19773.214Colobus_angolensis_palliatus
ENSCVAG00000014378YTHDF19975.806ENSCGRG00001016568Ythdf19774.419Cricetulus_griseus_chok1gshd
ENSCVAG00000014378YTHDF19975.806ENSCGRG00000009207Ythdf19974.419Cricetulus_griseus_crigri
ENSCVAG00000014378YTHDF19679.889ENSCSEG00000020623YTHDF19977.592Cynoglossus_semilaevis
ENSCVAG00000014378YTHDF110080.707ENSDARG00000016447ythdf110081.021Danio_rerio
ENSCVAG00000014378YTHDF19975.583ENSDNOG00000043590YTHDF19775.134Dasypus_novemcinctus
ENSCVAG00000014378YTHDF110071.758ENSDORG00000002879Ythdf19571.277Dipodomys_ordii
ENSCVAG00000014378YTHDF18055.516ENSETEG00000017860-9854.023Echinops_telfairi
ENSCVAG00000014378YTHDF19975.627ENSEASG00005023186YTHDF19774.419Equus_asinus_asinus
ENSCVAG00000014378YTHDF19775.046ENSECAG00000019475YTHDF110073.814Equus_caballus
ENSCVAG00000014378YTHDF19474.624ENSEEUG00000007461YTHDF110073.546Erinaceus_europaeus
ENSCVAG00000014378YTHDF19983.108ENSELUG00000001906YTHDF19983.426Esox_lucius
ENSCVAG00000014378YTHDF19980.000ENSELUG00000022768ythdf19980.861Esox_lucius
ENSCVAG00000014378YTHDF19974.286ENSFCAG00000008917YTHDF19773.665Felis_catus
ENSCVAG00000014378YTHDF19976.565ENSFALG00000010463YTHDF19775.313Ficedula_albicollis
ENSCVAG00000014378YTHDF19974.281ENSFDAG00000019602YTHDF19774.281Fukomys_damarensis
ENSCVAG00000014378YTHDF19979.890ENSFHEG00000023218ythdf19679.813Fundulus_heteroclitus
ENSCVAG00000014378YTHDF110096.440ENSFHEG00000002540YTHDF110096.440Fundulus_heteroclitus
ENSCVAG00000014378YTHDF18990.654ENSGMOG00000019610ythdf18390.654Gadus_morhua
ENSCVAG00000014378YTHDF19976.292ENSGALG00000005745YTHDF110075.189Gallus_gallus
ENSCVAG00000014378YTHDF110097.735ENSGAFG00000021100YTHDF110097.735Gambusia_affinis
ENSCVAG00000014378YTHDF19976.774ENSGACG00000012014ythdf19976.973Gasterosteus_aculeatus
ENSCVAG00000014378YTHDF19986.851ENSGACG00000002613YTHDF19985.854Gasterosteus_aculeatus
ENSCVAG00000014378YTHDF19977.005ENSGAGG00000003007YTHDF19775.492Gopherus_agassizii
ENSCVAG00000014378YTHDF19975.357ENSGGOG00000008340YTHDF19773.393Gorilla_gorilla
ENSCVAG00000014378YTHDF110093.506ENSHBUG00000004875YTHDF110093.669Haplochromis_burtoni
ENSCVAG00000014378YTHDF19977.974ENSHBUG00000011284ythdf19976.268Haplochromis_burtoni
ENSCVAG00000014378YTHDF19974.281ENSHGLG00000006585YTHDF19773.656Heterocephalus_glaber_female
ENSCVAG00000014378YTHDF19974.281ENSHGLG00100004683YTHDF19773.656Heterocephalus_glaber_male
ENSCVAG00000014378YTHDF19975.475ENSHCOG00000008866ythdf19975.707Hippocampus_comes
ENSCVAG00000014378YTHDF110089.431ENSHCOG00000011303YTHDF110090.114Hippocampus_comes
ENSCVAG00000014378YTHDF19982.971ENSIPUG00000000425Ythdf110079.549Ictalurus_punctatus
ENSCVAG00000014378YTHDF19974.147ENSSTOG00000023001YTHDF19874.061Ictidomys_tridecemlineatus
ENSCVAG00000014378YTHDF19975.313ENSJJAG00000013589Ythdf19973.929Jaculus_jaculus
ENSCVAG00000014378YTHDF110097.070ENSKMAG00000017472YTHDF110097.070Kryptolebias_marmoratus
ENSCVAG00000014378YTHDF19682.331ENSKMAG00000005595ythdf19581.579Kryptolebias_marmoratus
ENSCVAG00000014378YTHDF19680.639ENSLBEG00000014105ythdf19977.456Labrus_bergylta
ENSCVAG00000014378YTHDF110091.909ENSLBEG00000012068YTHDF110090.777Labrus_bergylta
ENSCVAG00000014378YTHDF19873.571ENSLACG00000014195YTHDF19872.759Latimeria_chalumnae
ENSCVAG00000014378YTHDF110079.126ENSLOCG00000005020ythdf110077.456Lepisosteus_oculatus
ENSCVAG00000014378YTHDF110074.336ENSLAFG00000008884YTHDF19773.571Loxodonta_africana
ENSCVAG00000014378YTHDF19974.821ENSMFAG00000042868YTHDF19773.393Macaca_fascicularis
ENSCVAG00000014378YTHDF19974.821ENSMMUG00000009227YTHDF19773.393Macaca_mulatta
ENSCVAG00000014378YTHDF19974.821ENSMNEG00000030851YTHDF19773.393Macaca_nemestrina
ENSCVAG00000014378YTHDF19974.821ENSMLEG00000009252YTHDF19973.393Mandrillus_leucophaeus
ENSCVAG00000014378YTHDF110094.498ENSMAMG00000011072YTHDF110093.851Mastacembelus_armatus
ENSCVAG00000014378YTHDF19680.337ENSMAMG00000024255ythdf19973.968Mastacembelus_armatus
ENSCVAG00000014378YTHDF110093.506ENSMZEG00005023596YTHDF110093.669Maylandia_zebra
ENSCVAG00000014378YTHDF19978.170ENSMZEG00005026397ythdf19878.435Maylandia_zebra
ENSCVAG00000014378YTHDF19976.292ENSMGAG00000006139YTHDF19775.579Meleagris_gallopavo
ENSCVAG00000014378YTHDF19975.627ENSMAUG00000017660Ythdf19774.240Mesocricetus_auratus
ENSCVAG00000014378YTHDF19974.199ENSMICG00000032266YTHDF19772.954Microcebus_murinus
ENSCVAG00000014378YTHDF19975.090ENSMOCG00000013573Ythdf19774.419Microtus_ochrogaster
ENSCVAG00000014378YTHDF19676.491ENSMMOG00000017500ythdf19874.878Mola_mola
ENSCVAG00000014378YTHDF19991.396ENSMMOG00000020467YTHDF19990.584Mola_mola
ENSCVAG00000014378YTHDF19375.330ENSMODG00000016842YTHDF110074.573Monodelphis_domestica
ENSCVAG00000014378YTHDF19680.699ENSMALG00000015672ythdf19976.277Monopterus_albus
ENSCVAG00000014378YTHDF110091.438ENSMALG00000022209YTHDF110091.922Monopterus_albus
ENSCVAG00000014378YTHDF19975.269MGP_CAROLIEiJ_G0024790Ythdf19773.882Mus_caroli
ENSCVAG00000014378YTHDF19975.269ENSMUSG00000038848Ythdf19773.882Mus_musculus
ENSCVAG00000014378YTHDF19975.269MGP_PahariEiJ_G0026237Ythdf19773.882Mus_pahari
ENSCVAG00000014378YTHDF19975.269MGP_SPRETEiJ_G0025715Ythdf19773.882Mus_spretus
ENSCVAG00000014378YTHDF19371.923ENSMPUG00000008111YTHDF110072.658Mustela_putorius_furo
ENSCVAG00000014378YTHDF19974.555ENSMLUG00000002241YTHDF19773.084Myotis_lucifugus
ENSCVAG00000014378YTHDF19975.269ENSNGAG00000000334Ythdf19774.240Nannospalax_galili
ENSCVAG00000014378YTHDF19979.174ENSNBRG00000008213ythdf19583.333Neolamprologus_brichardi
ENSCVAG00000014378YTHDF19994.074ENSNBRG00000015321YTHDF19993.445Neolamprologus_brichardi
ENSCVAG00000014378YTHDF19769.216ENSOPRG00000001758-9868.834Ochotona_princeps
ENSCVAG00000014378YTHDF19961.388ENSODEG00000000074-10058.454Octodon_degus
ENSCVAG00000014378YTHDF19974.061ENSODEG00000004380-9773.214Octodon_degus
ENSCVAG00000014378YTHDF19677.798ENSONIG00000016799ythdf19977.504Oreochromis_niloticus
ENSCVAG00000014378YTHDF19976.554ENSOANG00000003723YTHDF19775.000Ornithorhynchus_anatinus
ENSCVAG00000014378YTHDF17586.486ENSOCUG00000012780YTHDF19671.349Oryctolagus_cuniculus
ENSCVAG00000014378YTHDF19976.404ENSORLG00000014665YTHDF19975.641Oryzias_latipes
ENSCVAG00000014378YTHDF110091.248ENSORLG00000009739YTHDF110091.734Oryzias_latipes
ENSCVAG00000014378YTHDF110090.113ENSORLG00020001332YTHDF110090.276Oryzias_latipes_hni
ENSCVAG00000014378YTHDF19977.010ENSORLG00020000307ythdf19976.244Oryzias_latipes_hni
ENSCVAG00000014378YTHDF110090.924ENSORLG00015018321YTHDF110091.410Oryzias_latipes_hsok
ENSCVAG00000014378YTHDF19976.849ENSORLG00015006302ythdf19976.083Oryzias_latipes_hsok
ENSCVAG00000014378YTHDF19680.370ENSOMEG00000002941YTHDF19976.527Oryzias_melastigma
ENSCVAG00000014378YTHDF110090.438ENSOMEG00000011843YTHDF110089.789Oryzias_melastigma
ENSCVAG00000014378YTHDF19973.703ENSOGAG00000000480YTHDF19771.908Otolemur_garnettii
ENSCVAG00000014378YTHDF19973.346ENSOARG00000011639YTHDF19672.007Ovis_aries
ENSCVAG00000014378YTHDF19975.357ENSPPAG00000023277YTHDF19873.393Pan_paniscus
ENSCVAG00000014378YTHDF19974.643ENSPPRG00000020805YTHDF19774.199Panthera_pardus
ENSCVAG00000014378YTHDF19973.297ENSPTIG00000017355YTHDF19779.134Panthera_tigris_altaica
ENSCVAG00000014378YTHDF19975.357ENSPTRG00000013730YTHDF19773.393Pan_troglodytes
ENSCVAG00000014378YTHDF19974.821ENSPANG00000021472YTHDF19773.393Papio_anubis
ENSCVAG00000014378YTHDF19874.595ENSPKIG00000005026YTHDF19872.896Paramormyrops_kingsleyae
ENSCVAG00000014378YTHDF19974.373ENSPKIG00000005427ythdf19875.000Paramormyrops_kingsleyae
ENSCVAG00000014378YTHDF19875.632ENSPSIG00000005529YTHDF19873.311Pelodiscus_sinensis
ENSCVAG00000014378YTHDF19678.700ENSPMGG00000015328ythdf19778.485Periophthalmus_magnuspinnatus
ENSCVAG00000014378YTHDF19891.847ENSPMGG00000009101YTHDF19991.847Periophthalmus_magnuspinnatus
ENSCVAG00000014378YTHDF19975.627ENSPEMG00000020199Ythdf19974.419Peromyscus_maniculatus_bairdii
ENSCVAG00000014378YTHDF19876.044ENSPCIG00000017170YTHDF110074.953Phascolarctos_cinereus
ENSCVAG00000014378YTHDF19976.511ENSPFOG00000005405ythdf19975.040Poecilia_formosa
ENSCVAG00000014378YTHDF19879.391ENSPLAG00000006653ythdf19580.037Poecilia_latipinna
ENSCVAG00000014378YTHDF110097.896ENSPLAG00000006298YTHDF110097.896Poecilia_latipinna
ENSCVAG00000014378YTHDF19878.354ENSPMEG00000023753ythdf19580.074Poecilia_mexicana
ENSCVAG00000014378YTHDF110098.058ENSPMEG00000020969-10098.058Poecilia_mexicana
ENSCVAG00000014378YTHDF19879.570ENSPREG00000002173ythdf19580.597Poecilia_reticulata
ENSCVAG00000014378YTHDF19897.351ENSPREG00000017662YTHDF19997.351Poecilia_reticulata
ENSCVAG00000014378YTHDF19969.871ENSPPYG00000011226YTHDF19890.099Pongo_abelii
ENSCVAG00000014378YTHDF19172.070ENSPCAG00000002452YTHDF19870.784Procavia_capensis
ENSCVAG00000014378YTHDF19974.240ENSPCOG00000025969YTHDF19773.214Propithecus_coquereli
ENSCVAG00000014378YTHDF19870.092ENSPVAG00000017568YTHDF19966.555Pteropus_vampyrus
ENSCVAG00000014378YTHDF19977.974ENSPNYG00000014007ythdf19977.076Pundamilia_nyererei
ENSCVAG00000014378YTHDF110093.506ENSPNYG00000002266YTHDF110093.669Pundamilia_nyererei
ENSCVAG00000014378YTHDF110081.583ENSPNAG00000012447ythdf110081.847Pygocentrus_nattereri
ENSCVAG00000014378YTHDF19974.552ENSRNOG00000027015Ythdf110071.197Rattus_norvegicus
ENSCVAG00000014378YTHDF19973.929ENSRBIG00000044959YTHDF19773.036Rhinopithecus_bieti
ENSCVAG00000014378YTHDF19973.929ENSRROG00000033014YTHDF19773.036Rhinopithecus_roxellana
ENSCVAG00000014378YTHDF110072.389ENSSBOG00000027278YTHDF110071.347Saimiri_boliviensis_boliviensis
ENSCVAG00000014378YTHDF19976.523ENSSHAG00000010430YTHDF18775.357Sarcophilus_harrisii
ENSCVAG00000014378YTHDF110078.896ENSSFOG00015000284ythdf110078.571Scleropages_formosus
ENSCVAG00000014378YTHDF19990.640ENSSMAG00000007635YTHDF110088.668Scophthalmus_maximus
ENSCVAG00000014378YTHDF17691.720ENSSMAG00000013715ythdf19086.111Scophthalmus_maximus
ENSCVAG00000014378YTHDF19994.280ENSSDUG00000015823YTHDF19894.280Seriola_dumerili
ENSCVAG00000014378YTHDF19681.584ENSSDUG00000000435ythdf19977.831Seriola_dumerili
ENSCVAG00000014378YTHDF110091.720ENSSLDG00000001054YTHDF110090.287Seriola_lalandi_dorsalis
ENSCVAG00000014378YTHDF19978.374ENSSLDG00000024948ythdf19978.191Seriola_lalandi_dorsalis
ENSCVAG00000014378YTHDF19376.281ENSSPUG00000015143YTHDF110075.810Sphenodon_punctatus
ENSCVAG00000014378YTHDF110094.498ENSSPAG00000003666YTHDF110094.013Stegastes_partitus
ENSCVAG00000014378YTHDF19976.667ENSSPAG00000014989ythdf19976.603Stegastes_partitus
ENSCVAG00000014378YTHDF19972.760ENSSSCG00000040086YTHDF19772.183Sus_scrofa
ENSCVAG00000014378YTHDF19976.292ENSTGUG00000007565YTHDF19875.223Taeniopygia_guttata
ENSCVAG00000014378YTHDF19491.795ENSTRUG00000005049YTHDF19989.684Takifugu_rubripes
ENSCVAG00000014378YTHDF19977.565ENSTRUG00000004288ythdf19977.076Takifugu_rubripes
ENSCVAG00000014378YTHDF19977.256ENSTNIG00000012490ythdf19973.199Tetraodon_nigroviridis
ENSCVAG00000014378YTHDF19988.095ENSTNIG00000003975YTHDF19786.885Tetraodon_nigroviridis
ENSCVAG00000014378YTHDF19872.545ENSTTRG00000001804YTHDF19969.616Tursiops_truncatus
ENSCVAG00000014378YTHDF110074.377ENSUAMG00000011021YTHDF110073.245Ursus_americanus
ENSCVAG00000014378YTHDF19374.286ENSUMAG00000022290YTHDF110073.055Ursus_maritimus
ENSCVAG00000014378YTHDF19374.379ENSVVUG00000015275YTHDF19973.664Vulpes_vulpes
ENSCVAG00000014378YTHDF19875.623ENSXETG00000027086ythdf19772.297Xenopus_tropicalis
ENSCVAG00000014378YTHDF19879.211ENSXCOG00000002490ythdf19280.224Xiphophorus_couchianus
ENSCVAG00000014378YTHDF19897.015ENSXCOG00000008115YTHDF19997.015Xiphophorus_couchianus
ENSCVAG00000014378YTHDF110098.168ENSXMAG00000015644YTHDF110098.168Xiphophorus_maculatus
ENSCVAG00000014378YTHDF19979.107ENSXMAG00000008525ythdf19976.883Xiphophorus_maculatus

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