EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000014469 (Gene tree)
Gene ID: 107094871
Gene Symbol: si:dkey-31m14.7
Alias: -
Full Name: MAP/microtubule affinity-regulating kinase 4-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 81998 bases
Position: chrKL653010.1:32870-114867
Accession: 107094871
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000011964	RIO1	PF01163.22	0.00022	1	1
ENSCVAP00000027794	RIO1	PF01163.22	0.00022	1	1
ENSCVAP00000027732	RIO1	PF01163.22	0.00024	1	1
ENSCVAP00000027752	RIO1	PF01163.22	0.00025	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000019116	-	6198	-	ENSCVAP00000027794	696 (aa)	-	UPI00074284BD
ENSCVAT00000019093	-	4097	XM_015390744	ENSCVAP00000011964	696 (aa)	XP_015246230	UPI00074284BD
ENSCVAT00000019096	-	6115	-	ENSCVAP00000027752	763 (aa)	-	UPI0007428D10
ENSCVAT00000030142	-	2235	-	ENSCVAP00000027732	744 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000014469's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000014469's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000014469	si:dkey-31m14.7	98	61.930	ENSCVAG00000018949	mark3a	99	60.489

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000014469	si:dkey-31m14.7	97	88.752	ENSAOCG00000003969	si:dkey-31m14.7	99	88.340	Amphiprion_ocellaris
ENSCVAG00000014469	si:dkey-31m14.7	97	87.950	ENSAPEG00000016512	si:dkey-31m14.7	98	87.535	Amphiprion_percula
ENSCVAG00000014469	si:dkey-31m14.7	99	66.625	ENSECAG00000000359	MARK4	100	66.418	Equus_caballus
ENSCVAG00000014469	si:dkey-31m14.7	100	91.117	ENSKMAG00000021234	si:dkey-31m14.7	100	91.834	Kryptolebias_marmoratus
ENSCVAG00000014469	si:dkey-31m14.7	98	88.355	ENSMALG00000005674	si:dkey-31m14.7	100	82.500	Monopterus_albus
ENSCVAG00000014469	si:dkey-31m14.7	99	89.196	ENSOMEG00000023266	si:dkey-31m14.7	100	89.065	Oryzias_melastigma
ENSCVAG00000014469	si:dkey-31m14.7	99	75.270	ENSPMGG00000010182	-	99	74.900	Periophthalmus_magnuspinnatus
ENSCVAG00000014469	si:dkey-31m14.7	95	96.212	ENSPFOG00000016884	si:dkey-31m14.7	93	96.212	Poecilia_formosa
ENSCVAG00000014469	si:dkey-31m14.7	100	95.675	ENSPLAG00000023464	si:dkey-31m14.7	100	95.675	Poecilia_latipinna
ENSCVAG00000014469	si:dkey-31m14.7	97	93.531	ENSPREG00000019203	si:dkey-31m14.7	98	93.531	Poecilia_reticulata
ENSCVAG00000014469	si:dkey-31m14.7	100	95.977	ENSXMAG00000005903	si:dkey-31m14.7	100	95.977	Xiphophorus_maculatus