EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000014482 (Gene tree)
Gene ID: 107086442
Gene Symbol: pcbp3
Alias: -
Full Name: poly(rC)-binding protein 3-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 28252 bases
Position: chrKL652653.1:493241-521492
Accession: 107086442
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000012100	KH_1	PF00013.29	1.9e-54	1	3
ENSCVAP00000012100	KH_1	PF00013.29	1.9e-54	2	3
ENSCVAP00000012100	KH_1	PF00013.29	1.9e-54	3	3
ENSCVAP00000012100	KH_2	PF07650.17	5.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000019267	-	4770	XM_015377380	ENSCVAP00000012100	351 (aa)	XP_015232866	UPI000444613D

Gene Model

Click here to download ENSCVAG00000014482's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000014482's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000014482	pcbp3	91	31.387	ENSCVAG00000018051	igf2bp1	53	31.387
ENSCVAG00000014482	pcbp3	95	35.211	ENSCVAG00000008891	igf2bp3	65	35.211
ENSCVAG00000014482	pcbp3	64	40.299	ENSCVAG00000001873	khsrp	52	40.299
ENSCVAG00000014482	pcbp3	91	57.792	ENSCVAG00000003674	pcbp4	72	56.250
ENSCVAG00000014482	pcbp3	91	35.252	ENSCVAG00000004656	igf2bp2b	64	35.000
ENSCVAG00000014482	pcbp3	98	59.239	ENSCVAG00000013090	-	78	59.239
ENSCVAG00000014482	pcbp3	58	55.224	ENSCVAG00000006278	hnrnpk	56	51.351
ENSCVAG00000014482	pcbp3	94	73.716	ENSCVAG00000015775	pcbp2	96	73.716
ENSCVAG00000014482	pcbp3	60	42.857	ENSCVAG00000014025	NOVA1	94	41.667
ENSCVAG00000014482	pcbp3	73	78.857	ENSCVAG00000004726	zgc:110045	79	78.857
ENSCVAG00000014482	pcbp3	94	73.414	ENSCVAG00000009913	PCBP2	96	73.414
ENSCVAG00000014482	pcbp3	100	90.057	ENSCVAG00000005262	-	100	90.057
ENSCVAG00000014482	pcbp3	64	40.741	ENSCVAG00000014487	fubp1	53	40.909

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000014482	pcbp3	100	90.625	ENSAPOG00000016582	-	100	90.625	Acanthochromis_polyacanthus
ENSCVAG00000014482	pcbp3	95	89.851	ENSAPOG00000020003	pcbp3	86	89.851	Acanthochromis_polyacanthus
ENSCVAG00000014482	pcbp3	93	87.278	ENSAMEG00000001697	-	96	87.278	Ailuropoda_melanoleuca
ENSCVAG00000014482	pcbp3	95	88.393	ENSACIG00000002739	-	97	88.393	Amphilophus_citrinellus
ENSCVAG00000014482	pcbp3	100	96.307	ENSACIG00000010933	pcbp3	100	96.307	Amphilophus_citrinellus
ENSCVAG00000014482	pcbp3	97	90.643	ENSAOCG00000008592	-	100	90.643	Amphiprion_ocellaris
ENSCVAG00000014482	pcbp3	91	85.902	ENSAOCG00000007806	-	97	85.902	Amphiprion_ocellaris
ENSCVAG00000014482	pcbp3	100	99.716	ENSAPEG00000008011	pcbp3	100	99.716	Amphiprion_percula
ENSCVAG00000014482	pcbp3	95	87.798	ENSAPEG00000005209	-	97	87.798	Amphiprion_percula
ENSCVAG00000014482	pcbp3	95	96.716	ENSATEG00000015787	-	100	96.716	Anabas_testudineus
ENSCVAG00000014482	pcbp3	95	87.500	ENSATEG00000009833	-	97	87.500	Anabas_testudineus
ENSCVAG00000014482	pcbp3	93	85.630	ENSAPLG00000002975	-	95	85.630	Anas_platyrhynchos
ENSCVAG00000014482	pcbp3	98	77.507	ENSAPLG00000008951	-	82	77.507	Anas_platyrhynchos
ENSCVAG00000014482	pcbp3	93	86.585	ENSACAG00000009819	-	95	86.585	Anolis_carolinensis
ENSCVAG00000014482	pcbp3	93	90.778	ENSACAG00000004607	-	96	90.778	Anolis_carolinensis
ENSCVAG00000014482	pcbp3	91	87.778	ENSANAG00000030702	-	96	87.778	Aotus_nancymaae
ENSCVAG00000014482	pcbp3	100	98.864	ENSACLG00000011835	pcbp3	100	98.864	Astatotilapia_calliptera
ENSCVAG00000014482	pcbp3	100	90.057	ENSACLG00000003801	-	100	90.057	Astatotilapia_calliptera
ENSCVAG00000014482	pcbp3	95	85.629	ENSAMXG00000013588	-	100	85.629	Astyanax_mexicanus
ENSCVAG00000014482	pcbp3	100	96.591	ENSAMXG00000003440	pcbp3	100	96.591	Astyanax_mexicanus
ENSCVAG00000014482	pcbp3	94	64.387	ENSAMXG00000001760	zgc:110045	73	64.387	Astyanax_mexicanus
ENSCVAG00000014482	pcbp3	87	86.905	ENSCAFG00020019472	-	81	86.905	Canis_lupus_dingo
ENSCVAG00000014482	pcbp3	93	88.450	ENSCSAG00000007440	-	87	88.450	Chlorocebus_sabaeus
ENSCVAG00000014482	pcbp3	98	85.217	ENSCPBG00000012151	-	95	85.217	Chrysemys_picta_bellii
ENSCVAG00000014482	pcbp3	98	87.204	ENSCPBG00000000733	-	72	87.204	Chrysemys_picta_bellii
ENSCVAG00000014482	pcbp3	95	72.222	ENSCSEG00000016984	-	97	74.812	Cynoglossus_semilaevis
ENSCVAG00000014482	pcbp3	95	88.060	ENSCSEG00000000822	pcbp3	90	97.248	Cynoglossus_semilaevis
ENSCVAG00000014482	pcbp3	100	96.875	ENSDARG00000054378	pcbp3	100	96.875	Danio_rerio
ENSCVAG00000014482	pcbp3	93	75.076	ENSETEG00000015988	-	95	75.076	Echinops_telfairi
ENSCVAG00000014482	pcbp3	95	74.260	ENSEBUG00000007485	-	92	73.967	Eptatretus_burgeri
ENSCVAG00000014482	pcbp3	91	69.072	ENSEBUG00000016192	pcbp3	99	69.072	Eptatretus_burgeri
ENSCVAG00000014482	pcbp3	70	67.742	ENSEBUG00000005495	pcbp3	68	67.742	Eptatretus_burgeri
ENSCVAG00000014482	pcbp3	100	90.341	ENSELUG00000001560	-	100	83.149	Esox_lucius
ENSCVAG00000014482	pcbp3	100	97.740	ENSELUG00000003521	pcbp3	100	97.740	Esox_lucius
ENSCVAG00000014482	pcbp3	93	88.720	ENSFALG00000003949	-	95	88.720	Ficedula_albicollis
ENSCVAG00000014482	pcbp3	98	77.778	ENSFALG00000004411	-	77	77.778	Ficedula_albicollis
ENSCVAG00000014482	pcbp3	95	87.202	ENSFHEG00000006539	-	97	87.202	Fundulus_heteroclitus
ENSCVAG00000014482	pcbp3	97	88.563	ENSFHEG00000016615	pcbp3	97	88.563	Fundulus_heteroclitus
ENSCVAG00000014482	pcbp3	95	67.330	ENSGMOG00000008611	-	100	67.330	Gadus_morhua
ENSCVAG00000014482	pcbp3	95	76.620	ENSGMOG00000011992	pcbp3	96	76.685	Gadus_morhua
ENSCVAG00000014482	pcbp3	93	86.810	ENSGALG00000013155	-	98	83.841	Gallus_gallus
ENSCVAG00000014482	pcbp3	93	88.439	ENSGALG00000004394	-	96	88.439	Gallus_gallus
ENSCVAG00000014482	pcbp3	100	90.057	ENSGAFG00000010274	-	100	90.057	Gambusia_affinis
ENSCVAG00000014482	pcbp3	95	94.925	ENSGAFG00000011430	pcbp3	96	94.925	Gambusia_affinis
ENSCVAG00000014482	pcbp3	96	84.181	ENSGACG00000002266	-	97	84.181	Gasterosteus_aculeatus
ENSCVAG00000014482	pcbp3	95	84.659	ENSGACG00000014955	-	97	84.659	Gasterosteus_aculeatus
ENSCVAG00000014482	pcbp3	82	82.479	ENSGAGG00000006956	-	93	82.479	Gopherus_agassizii
ENSCVAG00000014482	pcbp3	94	80.916	ENSGAGG00000000271	-	100	81.100	Gopherus_agassizii
ENSCVAG00000014482	pcbp3	100	99.430	ENSHBUG00000010697	pcbp3	100	99.430	Haplochromis_burtoni
ENSCVAG00000014482	pcbp3	100	90.057	ENSHBUG00000021782	-	100	90.057	Haplochromis_burtoni
ENSCVAG00000014482	pcbp3	95	85.970	ENSHCOG00000006067	-	97	85.970	Hippocampus_comes
ENSCVAG00000014482	pcbp3	100	99.715	ENSHCOG00000017868	pcbp3	100	99.715	Hippocampus_comes
ENSCVAG00000014482	pcbp3	95	95.536	ENSIPUG00000006238	pcbp3	97	95.536	Ictalurus_punctatus
ENSCVAG00000014482	pcbp3	100	89.205	ENSKMAG00000018530	-	100	89.205	Kryptolebias_marmoratus
ENSCVAG00000014482	pcbp3	100	99.432	ENSKMAG00000003046	pcbp3	100	99.432	Kryptolebias_marmoratus
ENSCVAG00000014482	pcbp3	96	88.757	ENSLBEG00000006201	pcbp3	96	88.757	Labrus_bergylta
ENSCVAG00000014482	pcbp3	100	78.917	ENSLBEG00000006542	-	100	79.487	Labrus_bergylta
ENSCVAG00000014482	pcbp3	97	85.479	ENSLACG00000010386	pcbp3	77	85.479	Latimeria_chalumnae
ENSCVAG00000014482	pcbp3	98	77.596	ENSLACG00000010804	zgc:110045	77	77.596	Latimeria_chalumnae
ENSCVAG00000014482	pcbp3	93	85.976	ENSLOCG00000005058	zgc:110045	80	85.976	Lepisosteus_oculatus
ENSCVAG00000014482	pcbp3	93	95.441	ENSLOCG00000009369	pcbp3	96	95.441	Lepisosteus_oculatus
ENSCVAG00000014482	pcbp3	95	86.310	ENSMAMG00000011620	-	97	86.310	Mastacembelus_armatus
ENSCVAG00000014482	pcbp3	95	90.120	ENSMAMG00000022336	pcbp3	93	90.120	Mastacembelus_armatus
ENSCVAG00000014482	pcbp3	100	96.023	ENSMZEG00005008993	pcbp3	100	96.023	Maylandia_zebra
ENSCVAG00000014482	pcbp3	100	86.895	ENSMZEG00005014882	-	100	87.006	Maylandia_zebra
ENSCVAG00000014482	pcbp3	98	77.778	ENSMGAG00000006794	-	77	77.778	Meleagris_gallopavo
ENSCVAG00000014482	pcbp3	94	80.172	ENSMGAG00000001883	-	96	80.172	Meleagris_gallopavo
ENSCVAG00000014482	pcbp3	95	86.905	ENSMMOG00000005216	-	97	86.905	Mola_mola
ENSCVAG00000014482	pcbp3	95	89.286	ENSMMOG00000000730	pcbp3	88	89.286	Mola_mola
ENSCVAG00000014482	pcbp3	72	85.981	ENSMODG00000027884	-	93	85.981	Monodelphis_domestica
ENSCVAG00000014482	pcbp3	100	96.875	ENSMALG00000000691	pcbp3	100	96.875	Monopterus_albus
ENSCVAG00000014482	pcbp3	93	78.613	ENSMPUG00000001779	-	88	78.613	Mustela_putorius_furo
ENSCVAG00000014482	pcbp3	100	89.106	ENSNBRG00000016714	-	100	89.106	Neolamprologus_brichardi
ENSCVAG00000014482	pcbp3	100	96.581	ENSNBRG00000016409	-	100	96.581	Neolamprologus_brichardi
ENSCVAG00000014482	pcbp3	93	88.081	ENSOPRG00000003431	-	99	88.081	Ochotona_princeps
ENSCVAG00000014482	pcbp3	95	94.318	ENSONIG00000012122	-	98	94.318	Oreochromis_niloticus
ENSCVAG00000014482	pcbp3	95	89.286	ENSONIG00000004611	-	97	89.286	Oreochromis_niloticus
ENSCVAG00000014482	pcbp3	93	88.415	ENSOCUG00000002696	-	87	88.415	Oryctolagus_cuniculus
ENSCVAG00000014482	pcbp3	95	92.239	ENSORLG00000000059	pcbp3	100	92.239	Oryzias_latipes
ENSCVAG00000014482	pcbp3	99	89.459	ENSORLG00000022739	-	99	89.459	Oryzias_latipes
ENSCVAG00000014482	pcbp3	95	92.239	ENSORLG00020012671	pcbp3	97	92.239	Oryzias_latipes_hni
ENSCVAG00000014482	pcbp3	99	89.174	ENSORLG00020006124	-	99	89.174	Oryzias_latipes_hni
ENSCVAG00000014482	pcbp3	99	89.459	ENSORLG00015008051	-	99	89.459	Oryzias_latipes_hsok
ENSCVAG00000014482	pcbp3	95	92.239	ENSORLG00015000429	pcbp3	97	92.239	Oryzias_latipes_hsok
ENSCVAG00000014482	pcbp3	91	90.196	ENSOMEG00000020811	pcbp3	97	90.196	Oryzias_melastigma
ENSCVAG00000014482	pcbp3	95	88.988	ENSOMEG00000020162	-	97	88.988	Oryzias_melastigma
ENSCVAG00000014482	pcbp3	93	82.720	ENSOGAG00000008044	-	96	82.720	Otolemur_garnettii
ENSCVAG00000014482	pcbp3	100	90.028	ENSPKIG00000019329	pcbp3	100	90.028	Paramormyrops_kingsleyae
ENSCVAG00000014482	pcbp3	76	79.524	ENSPKIG00000020913	-	91	79.524	Paramormyrops_kingsleyae
ENSCVAG00000014482	pcbp3	93	77.326	ENSPSIG00000014970	-	95	77.907	Pelodiscus_sinensis
ENSCVAG00000014482	pcbp3	94	80.916	ENSPSIG00000008350	-	72	80.916	Pelodiscus_sinensis
ENSCVAG00000014482	pcbp3	100	98.295	ENSPMGG00000022383	pcbp3	100	98.295	Periophthalmus_magnuspinnatus
ENSCVAG00000014482	pcbp3	70	89.362	ENSPMAG00000004637	-	97	89.362	Petromyzon_marinus
ENSCVAG00000014482	pcbp3	95	69.048	ENSPMAG00000004551	pcbp3	90	69.048	Petromyzon_marinus
ENSCVAG00000014482	pcbp3	93	95.137	ENSPCIG00000028092	-	96	95.137	Phascolarctos_cinereus
ENSCVAG00000014482	pcbp3	100	84.211	ENSPLAG00000011449	pcbp3	100	84.211	Poecilia_latipinna
ENSCVAG00000014482	pcbp3	94	84.795	ENSPLAG00000004074	-	89	84.795	Poecilia_latipinna
ENSCVAG00000014482	pcbp3	100	98.310	ENSPMEG00000021239	pcbp3	100	98.310	Poecilia_mexicana
ENSCVAG00000014482	pcbp3	100	88.319	ENSPMEG00000006653	-	100	88.319	Poecilia_mexicana
ENSCVAG00000014482	pcbp3	95	86.905	ENSPREG00000020585	-	97	86.905	Poecilia_reticulata
ENSCVAG00000014482	pcbp3	95	87.834	ENSPREG00000015736	pcbp3	99	87.834	Poecilia_reticulata
ENSCVAG00000014482	pcbp3	95	89.552	ENSPNYG00000012326	pcbp3	95	89.552	Pundamilia_nyererei
ENSCVAG00000014482	pcbp3	95	86.905	ENSPNYG00000013205	-	97	86.905	Pundamilia_nyererei
ENSCVAG00000014482	pcbp3	100	94.318	ENSPNAG00000008541	-	100	94.318	Pygocentrus_nattereri
ENSCVAG00000014482	pcbp3	95	89.881	ENSPNAG00000015104	pcbp3	97	89.881	Pygocentrus_nattereri
ENSCVAG00000014482	pcbp3	93	88.450	ENSRNOG00000001245	Pcbp3	95	88.450	Rattus_norvegicus
ENSCVAG00000014482	pcbp3	93	79.888	ENSRBIG00000028177	-	96	79.888	Rhinopithecus_bieti
ENSCVAG00000014482	pcbp3	93	84.615	ENSSHAG00000007890	-	96	84.104	Sarcophilus_harrisii
ENSCVAG00000014482	pcbp3	93	78.528	ENSSFOG00015007118	-	93	78.528	Scleropages_formosus
ENSCVAG00000014482	pcbp3	100	90.598	ENSSFOG00015010205	pcbp3	100	94.611	Scleropages_formosus
ENSCVAG00000014482	pcbp3	100	94.872	ENSSFOG00015014706	pcbp3	100	94.872	Scleropages_formosus
ENSCVAG00000014482	pcbp3	95	89.851	ENSSMAG00000011929	pcbp3	97	89.851	Scophthalmus_maximus
ENSCVAG00000014482	pcbp3	100	89.773	ENSSMAG00000003135	-	100	89.773	Scophthalmus_maximus
ENSCVAG00000014482	pcbp3	95	97.605	ENSSDUG00000011608	pcbp3	99	97.605	Seriola_dumerili
ENSCVAG00000014482	pcbp3	100	89.174	ENSSDUG00000008502	-	100	89.174	Seriola_dumerili
ENSCVAG00000014482	pcbp3	100	90.625	ENSSLDG00000020161	-	100	90.625	Seriola_lalandi_dorsalis
ENSCVAG00000014482	pcbp3	95	97.605	ENSSLDG00000008518	pcbp3	99	97.605	Seriola_lalandi_dorsalis
ENSCVAG00000014482	pcbp3	91	85.172	ENSSPUG00000013214	-	91	85.172	Sphenodon_punctatus
ENSCVAG00000014482	pcbp3	100	86.080	ENSSPAG00000023341	-	100	86.080	Stegastes_partitus
ENSCVAG00000014482	pcbp3	91	85.902	ENSSPAG00000004190	-	97	85.902	Stegastes_partitus
ENSCVAG00000014482	pcbp3	93	82.675	ENSTGUG00000008158	-	96	82.675	Taeniopygia_guttata
ENSCVAG00000014482	pcbp3	93	80.980	ENSTGUG00000003316	-	96	80.980	Taeniopygia_guttata
ENSCVAG00000014482	pcbp3	91	88.779	ENSTRUG00000006280	-	89	88.779	Takifugu_rubripes
ENSCVAG00000014482	pcbp3	100	92.614	ENSTRUG00000013604	pcbp3	100	92.614	Takifugu_rubripes
ENSCVAG00000014482	pcbp3	93	88.728	ENSTTRG00000015075	-	96	88.728	Tursiops_truncatus
ENSCVAG00000014482	pcbp3	93	82.997	ENSXETG00000011483	pcbp1	96	82.997	Xenopus_tropicalis
ENSCVAG00000014482	pcbp3	95	76.771	ENSXETG00000010491	pcbp2	77	76.771	Xenopus_tropicalis
ENSCVAG00000014482	pcbp3	100	98.310	ENSXCOG00000020481	pcbp3	100	98.310	Xiphophorus_couchianus
ENSCVAG00000014482	pcbp3	100	99.716	ENSXMAG00000008175	pcbp3	100	99.716	Xiphophorus_maculatus
ENSCVAG00000014482	pcbp3	100	90.341	ENSXMAG00000028711	-	100	90.341	Xiphophorus_maculatus