EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000014663 (Gene tree)
Gene ID: 107093736
Gene Symbol: zc3h13
Alias: zgc:66359
Full Name: zinc finger CCCH-type containing 13
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 13086 bases
Position: chrKL652943.1:624644-637729
Accession: 107093736
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000012258	zf-CCCH	PF00642.24	3.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000019467	-	6749	XM_015388964	ENSCVAP00000012258	1810 (aa)	XP_015244450	UPI000742BAD4

Gene Model

Click here to download ENSCVAG00000014663's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000014663's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000014663	zc3h13	51	76.360	ENSAPEG00000004887	zc3h13	52	77.673	Amphiprion_percula
ENSCVAG00000014663	zc3h13	51	76.354	ENSATEG00000003937	zc3h13	51	77.158	Anabas_testudineus
ENSCVAG00000014663	zc3h13	51	73.772	ENSACLG00000027909	zc3h13	51	73.739	Astatotilapia_calliptera
ENSCVAG00000014663	zc3h13	51	65.503	ENSCSEG00000010275	zc3h13	50	65.994	Cynoglossus_semilaevis
ENSCVAG00000014663	zc3h13	51	77.229	ENSGAFG00000005462	zc3h13	50	76.043	Gambusia_affinis
ENSCVAG00000014663	zc3h13	91	66.387	ENSGACG00000015166	zc3h13	81	66.421	Gasterosteus_aculeatus
ENSCVAG00000014663	zc3h13	51	73.229	ENSHBUG00000007100	zc3h13	51	73.298	Haplochromis_burtoni
ENSCVAG00000014663	zc3h13	72	81.152	ENSKMAG00000010701	zc3h13	100	73.523	Kryptolebias_marmoratus
ENSCVAG00000014663	zc3h13	51	73.849	ENSMZEG00005007473	zc3h13	51	73.922	Maylandia_zebra
ENSCVAG00000014663	zc3h13	51	73.416	ENSONIG00000012236	zc3h13	51	73.958	Oreochromis_niloticus
ENSCVAG00000014663	zc3h13	51	71.778	ENSORLG00000005201	zc3h13	51	71.444	Oryzias_latipes
ENSCVAG00000014663	zc3h13	51	70.763	ENSORLG00020016576	zc3h13	51	70.944	Oryzias_latipes_hni
ENSCVAG00000014663	zc3h13	51	72.611	ENSORLG00015014966	zc3h13	51	71.953	Oryzias_latipes_hsok
ENSCVAG00000014663	zc3h13	51	72.516	ENSOMEG00000007044	zc3h13	51	73.517	Oryzias_melastigma
ENSCVAG00000014663	zc3h13	71	60.488	ENSPKIG00000019756	zc3h13	54	50.210	Paramormyrops_kingsleyae
ENSCVAG00000014663	zc3h13	51	80.696	ENSPFOG00000005039	zc3h13	51	81.751	Poecilia_formosa
ENSCVAG00000014663	zc3h13	51	80.851	ENSPLAG00000014095	zc3h13	51	81.780	Poecilia_latipinna
ENSCVAG00000014663	zc3h13	51	79.659	ENSPREG00000010526	zc3h13	51	80.781	Poecilia_reticulata
ENSCVAG00000014663	zc3h13	61	62.656	ENSPCAG00000001146	ZC3H13	68	62.719	Procavia_capensis
ENSCVAG00000014663	zc3h13	51	74.346	ENSSMAG00000007110	zc3h13	51	74.922	Scophthalmus_maximus
ENSCVAG00000014663	zc3h13	51	75.440	ENSSDUG00000021808	zc3h13	51	76.452	Seriola_dumerili
ENSCVAG00000014663	zc3h13	51	74.170	ENSSPAG00000019966	zc3h13	51	76.819	Stegastes_partitus
ENSCVAG00000014663	zc3h13	65	74.772	ENSTNIG00000014523	zc3h13	76	79.452	Tetraodon_nigroviridis
ENSCVAG00000014663	zc3h13	74	58.537	ENSVPAG00000005179	ZC3H13	77	58.537	Vicugna_pacos
ENSCVAG00000014663	zc3h13	51	66.818	ENSXETG00000014637	zc3h13	96	45.174	Xenopus_tropicalis
ENSCVAG00000014663	zc3h13	51	79.468	ENSXMAG00000012423	zc3h13	52	79.873	Xiphophorus_maculatus