EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000014734 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 13098 bases
Position: chrKL653167.1:356548-369645
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000027975	zf-C2H2	PF00096.26	5.3e-41	1	7
ENSCVAP00000027975	zf-C2H2	PF00096.26	5.3e-41	2	7
ENSCVAP00000027975	zf-C2H2	PF00096.26	5.3e-41	3	7
ENSCVAP00000027975	zf-C2H2	PF00096.26	5.3e-41	4	7
ENSCVAP00000027975	zf-C2H2	PF00096.26	5.3e-41	5	7
ENSCVAP00000027975	zf-C2H2	PF00096.26	5.3e-41	6	7
ENSCVAP00000027975	zf-C2H2	PF00096.26	5.3e-41	7	7
ENSCVAP00000012323	zf-C2H2	PF00096.26	2.3e-27	1	4
ENSCVAP00000012323	zf-C2H2	PF00096.26	2.3e-27	2	4
ENSCVAP00000012323	zf-C2H2	PF00096.26	2.3e-27	3	4
ENSCVAP00000012323	zf-C2H2	PF00096.26	2.3e-27	4	4
ENSCVAP00000027975	zf-met	PF12874.7	1e-15	1	2
ENSCVAP00000027975	zf-met	PF12874.7	1e-15	2	2
ENSCVAP00000012323	zf-met	PF12874.7	4.4e-13	1	2
ENSCVAP00000012323	zf-met	PF12874.7	4.4e-13	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000019556	-	1098	-	ENSCVAP00000027975	365 (aa)	-	-
ENSCVAT00000019533	-	2080	-	ENSCVAP00000012323	337 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000014734's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000014734's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000014734	-	91	43.293	ENSCVAG00000012398	znf652	51	42.105
ENSCVAG00000014734	-	90	43.210	ENSCVAG00000006667	-	57	44.785
ENSCVAG00000014734	-	92	44.156	ENSCVAG00000008535	-	80	41.954
ENSCVAG00000014734	-	91	48.485	ENSCVAG00000012620	-	100	48.485
ENSCVAG00000014734	-	92	34.237	ENSCVAG00000008327	zbtb41	51	39.344
ENSCVAG00000014734	-	91	40.357	ENSCVAG00000012399	-	94	44.099
ENSCVAG00000014734	-	91	48.235	ENSCVAG00000012248	-	97	41.379
ENSCVAG00000014734	-	91	44.509	ENSCVAG00000009103	-	93	44.509
ENSCVAG00000014734	-	91	42.671	ENSCVAG00000001568	-	75	46.104
ENSCVAG00000014734	-	94	41.096	ENSCVAG00000014269	-	96	51.724
ENSCVAG00000014734	-	91	42.515	ENSCVAG00000003396	-	63	42.515
ENSCVAG00000014734	-	91	38.542	ENSCVAG00000019519	-	81	35.648
ENSCVAG00000014734	-	93	40.688	ENSCVAG00000016862	-	90	43.155
ENSCVAG00000014734	-	91	46.667	ENSCVAG00000010442	-	99	44.345
ENSCVAG00000014734	-	91	38.406	ENSCVAG00000004958	-	89	42.771
ENSCVAG00000014734	-	92	43.976	ENSCVAG00000002252	-	99	43.976
ENSCVAG00000014734	-	90	43.919	ENSCVAG00000008836	-	73	47.826
ENSCVAG00000014734	-	90	45.455	ENSCVAG00000002788	e4f1	58	40.854
ENSCVAG00000014734	-	92	50.000	ENSCVAG00000016964	-	96	50.000
ENSCVAG00000014734	-	86	38.462	ENSCVAG00000019574	-	80	38.462
ENSCVAG00000014734	-	91	42.751	ENSCVAG00000004368	-	72	42.751
ENSCVAG00000014734	-	93	43.056	ENSCVAG00000019705	-	64	43.056
ENSCVAG00000014734	-	89	58.621	ENSCVAG00000023371	-	63	58.621
ENSCVAG00000014734	-	91	42.724	ENSCVAG00000016181	-	95	43.000
ENSCVAG00000014734	-	91	43.636	ENSCVAG00000004930	GFI1	53	43.636
ENSCVAG00000014734	-	91	44.379	ENSCVAG00000002307	-	68	44.361
ENSCVAG00000014734	-	89	39.313	ENSCVAG00000002305	-	86	41.509
ENSCVAG00000014734	-	91	44.272	ENSCVAG00000003428	-	99	43.056
ENSCVAG00000014734	-	92	45.926	ENSCVAG00000012180	-	98	44.785
ENSCVAG00000014734	-	91	42.941	ENSCVAG00000011828	gfi1ab	52	42.941
ENSCVAG00000014734	-	92	44.444	ENSCVAG00000012302	-	93	45.270
ENSCVAG00000014734	-	94	44.444	ENSCVAG00000015110	znf526	64	44.444
ENSCVAG00000014734	-	97	42.384	ENSCVAG00000005112	-	80	42.384
ENSCVAG00000014734	-	92	43.000	ENSCVAG00000003512	-	98	43.860
ENSCVAG00000014734	-	91	41.018	ENSCVAG00000003514	-	85	44.172
ENSCVAG00000014734	-	98	46.988	ENSCVAG00000003497	-	88	46.988
ENSCVAG00000014734	-	93	45.395	ENSCVAG00000007051	-	99	45.395
ENSCVAG00000014734	-	98	42.268	ENSCVAG00000002500	-	97	39.184
ENSCVAG00000014734	-	88	41.288	ENSCVAG00000009752	-	60	43.925
ENSCVAG00000014734	-	95	38.838	ENSCVAG00000003601	ZNF319	95	38.838
ENSCVAG00000014734	-	97	46.893	ENSCVAG00000012284	-	79	46.893
ENSCVAG00000014734	-	91	38.776	ENSCVAG00000009561	scrt1b	51	38.776
ENSCVAG00000014734	-	91	35.948	ENSCVAG00000016325	znf341	60	30.363
ENSCVAG00000014734	-	91	43.452	ENSCVAG00000002242	-	91	43.452
ENSCVAG00000014734	-	92	41.896	ENSCVAG00000017511	-	98	41.896
ENSCVAG00000014734	-	91	45.930	ENSCVAG00000017515	-	95	45.930
ENSCVAG00000014734	-	95	37.462	ENSCVAG00000009258	znf319b	95	37.349
ENSCVAG00000014734	-	91	41.007	ENSCVAG00000002833	-	70	41.007
ENSCVAG00000014734	-	98	37.975	ENSCVAG00000002506	-	95	44.785
ENSCVAG00000014734	-	91	39.048	ENSCVAG00000002502	-	92	39.048
ENSCVAG00000014734	-	60	47.368	ENSCVAG00000009684	sall3a	51	52.830
ENSCVAG00000014734	-	91	38.926	ENSCVAG00000002295	-	95	43.662
ENSCVAG00000014734	-	88	44.043	ENSCVAG00000006491	-	79	43.262
ENSCVAG00000014734	-	92	42.202	ENSCVAG00000012228	-	83	42.202
ENSCVAG00000014734	-	95	33.511	ENSCVAG00000013048	-	71	34.848
ENSCVAG00000014734	-	91	40.426	ENSCVAG00000014322	-	70	45.588
ENSCVAG00000014734	-	91	44.326	ENSCVAG00000020938	-	95	46.104
ENSCVAG00000014734	-	91	42.902	ENSCVAG00000003433	-	99	46.626
ENSCVAG00000014734	-	90	46.667	ENSCVAG00000003434	-	91	46.667
ENSCVAG00000014734	-	99	44.311	ENSCVAG00000006389	-	96	44.099
ENSCVAG00000014734	-	91	42.985	ENSCVAG00000006460	-	75	42.985
ENSCVAG00000014734	-	99	44.309	ENSCVAG00000019537	-	84	44.309
ENSCVAG00000014734	-	91	46.619	ENSCVAG00000011469	-	76	42.767
ENSCVAG00000014734	-	91	43.624	ENSCVAG00000015616	-	84	43.624
ENSCVAG00000014734	-	91	43.813	ENSCVAG00000012343	-	92	45.985
ENSCVAG00000014734	-	90	46.853	ENSCVAG00000006653	-	74	36.095
ENSCVAG00000014734	-	90	48.718	ENSCVAG00000010887	-	55	47.727
ENSCVAG00000014734	-	90	38.053	ENSCVAG00000008717	snai1a	65	38.053
ENSCVAG00000014734	-	91	42.593	ENSCVAG00000016883	-	56	41.154
ENSCVAG00000014734	-	89	58.537	ENSCVAG00000017005	sall3b	93	49.398
ENSCVAG00000014734	-	92	38.854	ENSCVAG00000009747	-	55	39.877
ENSCVAG00000014734	-	93	42.262	ENSCVAG00000007073	-	72	47.222
ENSCVAG00000014734	-	91	46.328	ENSCVAG00000001417	-	96	48.466
ENSCVAG00000014734	-	90	42.767	ENSCVAG00000008952	-	97	45.918
ENSCVAG00000014734	-	91	45.669	ENSCVAG00000008206	-	90	46.626
ENSCVAG00000014734	-	92	44.333	ENSCVAG00000001767	-	80	44.333
ENSCVAG00000014734	-	93	45.201	ENSCVAG00000020119	-	71	45.614
ENSCVAG00000014734	-	91	43.030	ENSCVAG00000017168	gfi1b	56	43.030
ENSCVAG00000014734	-	93	46.774	ENSCVAG00000021107	-	98	41.975
ENSCVAG00000014734	-	91	47.101	ENSCVAG00000017890	-	88	46.075
ENSCVAG00000014734	-	91	44.928	ENSCVAG00000016092	-	90	40.606
ENSCVAG00000014734	-	91	39.016	ENSCVAG00000016098	-	99	39.016
ENSCVAG00000014734	-	93	46.053	ENSCVAG00000020414	-	82	42.017
ENSCVAG00000014734	-	91	39.175	ENSCVAG00000016534	-	71	39.568
ENSCVAG00000014734	-	90	43.919	ENSCVAG00000004222	-	51	40.462
ENSCVAG00000014734	-	91	43.590	ENSCVAG00000001609	-	86	32.237
ENSCVAG00000014734	-	91	45.788	ENSCVAG00000023054	-	63	45.788
ENSCVAG00000014734	-	91	39.130	ENSCVAG00000004382	-	87	44.595
ENSCVAG00000014734	-	91	43.827	ENSCVAG00000013382	-	60	48.201
ENSCVAG00000014734	-	93	48.889	ENSCVAG00000019764	-	90	44.318
ENSCVAG00000014734	-	91	44.224	ENSCVAG00000019767	-	55	47.368
ENSCVAG00000014734	-	91	43.114	ENSCVAG00000008200	-	89	43.114
ENSCVAG00000014734	-	89	39.928	ENSCVAG00000012520	-	74	46.154
ENSCVAG00000014734	-	92	43.243	ENSCVAG00000001444	-	97	48.936
ENSCVAG00000014734	-	91	47.154	ENSCVAG00000011213	-	99	45.133
ENSCVAG00000014734	-	55	42.169	ENSCVAG00000009930	-	62	39.535
ENSCVAG00000014734	-	92	44.565	ENSCVAG00000022991	-	95	44.667
ENSCVAG00000014734	-	93	40.491	ENSCVAG00000004388	-	53	40.698
ENSCVAG00000014734	-	92	40.411	ENSCVAG00000002284	-	64	43.478
ENSCVAG00000014734	-	91	40.000	ENSCVAG00000020141	-	74	40.000
ENSCVAG00000014734	-	92	42.857	ENSCVAG00000018383	-	80	42.857
ENSCVAG00000014734	-	91	42.857	ENSCVAG00000022174	-	62	41.818
ENSCVAG00000014734	-	91	40.625	ENSCVAG00000018485	-	95	40.625
ENSCVAG00000014734	-	91	45.926	ENSCVAG00000016915	-	50	45.926
ENSCVAG00000014734	-	98	44.167	ENSCVAG00000021225	-	93	51.724
ENSCVAG00000014734	-	97	44.490	ENSCVAG00000013337	-	91	48.000
ENSCVAG00000014734	-	91	44.444	ENSCVAG00000014404	-	94	44.444
ENSCVAG00000014734	-	91	41.143	ENSCVAG00000013692	prdm5	75	41.143
ENSCVAG00000014734	-	93	42.373	ENSCVAG00000001369	-	77	42.373
ENSCVAG00000014734	-	91	53.211	ENSCVAG00000012207	-	91	53.211
ENSCVAG00000014734	-	92	42.739	ENSCVAG00000009981	-	86	42.739
ENSCVAG00000014734	-	98	32.407	ENSCVAG00000018135	-	89	33.333
ENSCVAG00000014734	-	89	46.711	ENSCVAG00000016898	-	97	44.048
ENSCVAG00000014734	-	98	33.750	ENSCVAG00000007684	patz1	52	32.240
ENSCVAG00000014734	-	91	46.980	ENSCVAG00000009827	-	97	46.980
ENSCVAG00000014734	-	98	46.023	ENSCVAG00000012543	-	100	44.848
ENSCVAG00000014734	-	91	43.544	ENSCVAG00000020126	-	74	45.029
ENSCVAG00000014734	-	88	44.853	ENSCVAG00000019122	-	98	44.853
ENSCVAG00000014734	-	91	41.797	ENSCVAG00000011334	-	87	41.797
ENSCVAG00000014734	-	91	44.745	ENSCVAG00000005494	-	91	44.745
ENSCVAG00000014734	-	91	44.681	ENSCVAG00000016796	-	87	42.623
ENSCVAG00000014734	-	91	41.830	ENSCVAG00000002488	-	81	43.617
ENSCVAG00000014734	-	98	39.535	ENSCVAG00000004508	-	64	41.379
ENSCVAG00000014734	-	92	40.590	ENSCVAG00000014622	-	84	43.293
ENSCVAG00000014734	-	93	47.403	ENSCVAG00000020155	-	85	46.154
ENSCVAG00000014734	-	91	44.753	ENSCVAG00000000423	-	91	44.753
ENSCVAG00000014734	-	91	50.000	ENSCVAG00000003417	-	71	45.714
ENSCVAG00000014734	-	91	44.444	ENSCVAG00000010160	-	91	47.826
ENSCVAG00000014734	-	91	40.523	ENSCVAG00000020968	-	54	40.523
ENSCVAG00000014734	-	89	37.324	ENSCVAG00000016483	snai2	54	37.857
ENSCVAG00000014734	-	91	42.857	ENSCVAG00000019646	-	95	42.324
ENSCVAG00000014734	-	91	41.275	ENSCVAG00000006673	-	56	41.304
ENSCVAG00000014734	-	90	37.241	ENSCVAG00000000351	-	69	36.824
ENSCVAG00000014734	-	91	42.105	ENSCVAG00000003250	-	68	44.910
ENSCVAG00000014734	-	93	45.930	ENSCVAG00000003630	-	55	45.930
ENSCVAG00000014734	-	92	43.750	ENSCVAG00000000227	-	70	47.429
ENSCVAG00000014734	-	91	43.165	ENSCVAG00000007169	-	55	43.165
ENSCVAG00000014734	-	92	45.745	ENSCVAG00000012682	-	70	45.745
ENSCVAG00000014734	-	98	39.739	ENSCVAG00000000144	-	70	43.478
ENSCVAG00000014734	-	94	43.158	ENSCVAG00000000419	-	96	37.895
ENSCVAG00000014734	-	91	44.272	ENSCVAG00000005507	-	98	44.272
ENSCVAG00000014734	-	91	38.462	ENSCVAG00000021038	scrt2	54	38.462
ENSCVAG00000014734	-	98	42.230	ENSCVAG00000019097	-	62	42.667
ENSCVAG00000014734	-	91	50.336	ENSCVAG00000020745	-	93	50.000
ENSCVAG00000014734	-	91	45.847	ENSCVAG00000015153	-	73	45.847
ENSCVAG00000014734	-	93	38.166	ENSCVAG00000011235	-	89	43.931
ENSCVAG00000014734	-	91	40.310	ENSCVAG00000018507	-	83	39.394
ENSCVAG00000014734	-	88	47.706	ENSCVAG00000021152	-	51	50.575
ENSCVAG00000014734	-	91	42.025	ENSCVAG00000012216	-	86	43.956

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000014734	-	98	79.839	ENSAPOG00000002213	-	97	79.793	Acanthochromis_polyacanthus
ENSCVAG00000014734	-	91	76.619	ENSACIG00000013163	-	92	76.619	Amphilophus_citrinellus
ENSCVAG00000014734	-	91	47.407	ENSACIG00000013149	-	81	45.342	Amphilophus_citrinellus
ENSCVAG00000014734	-	95	77.099	ENSAOCG00000013124	-	91	77.099	Amphiprion_ocellaris
ENSCVAG00000014734	-	95	77.099	ENSAPEG00000009997	-	91	77.099	Amphiprion_percula
ENSCVAG00000014734	-	97	77.532	ENSATEG00000004127	-	96	87.500	Anabas_testudineus
ENSCVAG00000014734	-	96	79.762	ENSACLG00000005708	-	88	66.765	Astatotilapia_calliptera
ENSCVAG00000014734	-	98	58.333	ENSGMOG00000017526	-	93	77.976	Gadus_morhua
ENSCVAG00000014734	-	99	80.597	ENSGAFG00000011174	-	90	80.896	Gambusia_affinis
ENSCVAG00000014734	-	97	80.258	ENSGACG00000019550	-	100	80.258	Gasterosteus_aculeatus
ENSCVAG00000014734	-	96	79.762	ENSHBUG00000006662	-	88	66.765	Haplochromis_burtoni
ENSCVAG00000014734	-	97	80.741	ENSHCOG00000003041	-	93	80.741	Hippocampus_comes
ENSCVAG00000014734	-	98	69.767	ENSKMAG00000009979	-	87	68.047	Kryptolebias_marmoratus
ENSCVAG00000014734	-	96	74.182	ENSLBEG00000010165	-	90	77.366	Labrus_bergylta
ENSCVAG00000014734	-	97	77.500	ENSMAMG00000006312	-	92	73.448	Mastacembelus_armatus
ENSCVAG00000014734	-	96	79.762	ENSMZEG00005013913	-	88	66.765	Maylandia_zebra
ENSCVAG00000014734	-	97	69.231	ENSMMOG00000011282	-	92	89.349	Mola_mola
ENSCVAG00000014734	-	97	74.539	ENSMALG00000000494	-	92	74.539	Monopterus_albus
ENSCVAG00000014734	-	98	53.169	ENSNBRG00000007602	-	92	75.598	Neolamprologus_brichardi
ENSCVAG00000014734	-	91	56.135	ENSONIG00000003856	-	100	74.603	Oreochromis_niloticus
ENSCVAG00000014734	-	97	70.242	ENSORLG00000010117	-	89	70.242	Oryzias_latipes
ENSCVAG00000014734	-	96	73.214	ENSORLG00020000219	-	93	73.214	Oryzias_latipes_hni
ENSCVAG00000014734	-	96	73.571	ENSORLG00015000258	-	97	86.111	Oryzias_latipes_hsok
ENSCVAG00000014734	-	96	78.571	ENSOMEG00000018262	-	96	72.535	Oryzias_melastigma
ENSCVAG00000014734	-	70	90.426	ENSPFOG00000013455	-	100	90.426	Poecilia_formosa
ENSCVAG00000014734	-	91	79.762	ENSPLAG00000004027	-	84	90.452	Poecilia_latipinna
ENSCVAG00000014734	-	99	78.806	ENSPMEG00000007589	-	87	78.806	Poecilia_mexicana
ENSCVAG00000014734	-	91	67.898	ENSPREG00000000153	-	94	81.513	Poecilia_reticulata
ENSCVAG00000014734	-	92	63.636	ENSPNYG00000007781	-	97	63.636	Pundamilia_nyererei
ENSCVAG00000014734	-	96	81.364	ENSPNYG00000007814	-	96	68.553	Pundamilia_nyererei
ENSCVAG00000014734	-	97	79.726	ENSSMAG00000021251	-	99	75.728	Scophthalmus_maximus
ENSCVAG00000014734	-	96	77.099	ENSSDUG00000013904	-	90	77.099	Seriola_dumerili
ENSCVAG00000014734	-	98	76.119	ENSSLDG00000006994	-	96	88.235	Seriola_lalandi_dorsalis
ENSCVAG00000014734	-	95	77.481	ENSSPAG00000011524	-	87	77.481	Stegastes_partitus
ENSCVAG00000014734	-	98	75.956	ENSTRUG00000015687	-	97	81.132	Takifugu_rubripes
ENSCVAG00000014734	-	98	53.984	ENSTNIG00000008242	-	99	76.796	Tetraodon_nigroviridis
ENSCVAG00000014734	-	98	73.016	ENSXCOG00000015947	-	90	92.366	Xiphophorus_couchianus
ENSCVAG00000014734	-	99	81.325	ENSXMAG00000023291	-	99	83.193	Xiphophorus_maculatus