EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000014858 (Gene tree)
Gene ID: 107084210
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 4-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 16961 bases
Position: chrKL652594.1:419737-436697
Accession: 107084210
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000012412	RRM_5	PF13893.6	6.7e-11	1	2
ENSCVAP00000012412	RRM_5	PF13893.6	6.7e-11	2	2
ENSCVAP00000028032	RRM_5	PF13893.6	7.7e-11	1	2
ENSCVAP00000028032	RRM_5	PF13893.6	7.7e-11	2	2
ENSCVAP00000012388	RRM_5	PF13893.6	8.6e-11	1	2
ENSCVAP00000012388	RRM_5	PF13893.6	8.6e-11	2	2
ENSCVAP00000012412	RRM_1	PF00076.22	6.9e-34	1	2
ENSCVAP00000012412	RRM_1	PF00076.22	6.9e-34	2	2
ENSCVAP00000012388	RRM_1	PF00076.22	7.7e-34	1	2
ENSCVAP00000012388	RRM_1	PF00076.22	7.7e-34	2	2
ENSCVAP00000028032	RRM_1	PF00076.22	8e-34	1	2
ENSCVAP00000028032	RRM_1	PF00076.22	8e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000019706	-	5354	XM_015373929	ENSCVAP00000028032	547 (aa)	XP_015229415	UPI0007426305
ENSCVAT00000019635	-	1602	-	ENSCVAP00000012388	533 (aa)	-	-
ENSCVAT00000019649	-	2488	XM_015373930	ENSCVAP00000012412	520 (aa)	XP_015229416	UPI000742C78D

Gene Model

Click here to download ENSCVAG00000014858's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000014858's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000014858	-	74	48.963	ENSCVAG00000013776	rbm14b	84	49.068

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000014858	-	99	85.740	ENSAPOG00000003380	-	99	86.282	Acanthochromis_polyacanthus
ENSCVAG00000014858	-	67	63.095	ENSAPOG00000021712	rbm14b	71	61.034	Acanthochromis_polyacanthus
ENSCVAG00000014858	-	72	62.319	ENSACIG00000000381	rbm14b	65	62.319	Amphilophus_citrinellus
ENSCVAG00000014858	-	99	84.991	ENSACIG00000021173	-	99	85.138	Amphilophus_citrinellus
ENSCVAG00000014858	-	100	85.740	ENSAOCG00000001659	-	99	86.642	Amphiprion_ocellaris
ENSCVAG00000014858	-	67	64.286	ENSAOCG00000008941	rbm14b	82	56.997	Amphiprion_ocellaris
ENSCVAG00000014858	-	99	86.570	ENSAPEG00000016988	-	99	86.388	Amphiprion_percula
ENSCVAG00000014858	-	67	63.095	ENSAPEG00000003161	rbm14b	82	56.122	Amphiprion_percula
ENSCVAG00000014858	-	100	83.019	ENSATEG00000009700	-	97	82.830	Anabas_testudineus
ENSCVAG00000014858	-	72	61.594	ENSATEG00000003034	rbm14b	78	58.396	Anabas_testudineus
ENSCVAG00000014858	-	100	85.842	ENSACLG00000009112	-	97	86.535	Astatotilapia_calliptera
ENSCVAG00000014858	-	74	61.443	ENSAMXG00000007233	rbm14a	83	63.038	Astyanax_mexicanus
ENSCVAG00000014858	-	70	61.765	ENSAMXG00000031225	rbm14b	86	48.491	Astyanax_mexicanus
ENSCVAG00000014858	-	74	52.242	ENSCSEG00000000357	rbm14b	81	52.036	Cynoglossus_semilaevis
ENSCVAG00000014858	-	100	82.014	ENSCSEG00000019690	-	100	81.655	Cynoglossus_semilaevis
ENSCVAG00000014858	-	70	61.172	ENSDARG00000103834	rbm14b	64	61.905	Danio_rerio
ENSCVAG00000014858	-	74	59.747	ENSDARG00000012723	rbm14a	81	61.240	Danio_rerio
ENSCVAG00000014858	-	70	64.552	ENSELUG00000004690	rbm14b	71	64.103	Esox_lucius
ENSCVAG00000014858	-	88	56.313	ENSELUG00000023633	rbm14a	82	58.294	Esox_lucius
ENSCVAG00000014858	-	53	61.620	ENSFHEG00000021265	rbm14b	83	48.447	Fundulus_heteroclitus
ENSCVAG00000014858	-	100	93.893	ENSFHEG00000020913	-	100	94.656	Fundulus_heteroclitus
ENSCVAG00000014858	-	73	78.329	ENSGMOG00000010840	-	79	79.412	Gadus_morhua
ENSCVAG00000014858	-	74	60.702	ENSGAFG00000001924	rbm14b	68	60.690	Gambusia_affinis
ENSCVAG00000014858	-	100	92.352	ENSGAFG00000004455	-	100	93.117	Gambusia_affinis
ENSCVAG00000014858	-	96	82.737	ENSGACG00000020440	-	96	82.526	Gasterosteus_aculeatus
ENSCVAG00000014858	-	100	85.842	ENSHBUG00000003665	-	97	86.604	Haplochromis_burtoni
ENSCVAG00000014858	-	51	62.319	ENSHBUG00000016754	rbm14b	74	62.319	Haplochromis_burtoni
ENSCVAG00000014858	-	100	75.330	ENSHCOG00000004071	-	100	75.094	Hippocampus_comes
ENSCVAG00000014858	-	79	52.214	ENSHCOG00000012571	rbm14b	99	67.296	Hippocampus_comes
ENSCVAG00000014858	-	67	61.397	ENSIPUG00000009089	rbm14b	87	48.077	Ictalurus_punctatus
ENSCVAG00000014858	-	74	55.370	ENSIPUG00000021256	rbm14a	84	56.691	Ictalurus_punctatus
ENSCVAG00000014858	-	72	61.957	ENSKMAG00000020444	rbm14b	65	61.957	Kryptolebias_marmoratus
ENSCVAG00000014858	-	99	84.674	ENSKMAG00000008514	-	99	84.302	Kryptolebias_marmoratus
ENSCVAG00000014858	-	100	81.982	ENSLBEG00000001217	-	100	82.162	Labrus_bergylta
ENSCVAG00000014858	-	51	62.774	ENSLBEG00000027934	rbm14b	62	61.268	Labrus_bergylta
ENSCVAG00000014858	-	69	59.655	ENSMAMG00000014394	rbm14b	78	46.791	Mastacembelus_armatus
ENSCVAG00000014858	-	100	83.513	ENSMAMG00000021313	-	100	83.154	Mastacembelus_armatus
ENSCVAG00000014858	-	100	85.842	ENSMZEG00005001201	-	100	86.604	Maylandia_zebra
ENSCVAG00000014858	-	73	56.338	ENSMMOG00000012912	rbm14b	71	56.207	Mola_mola
ENSCVAG00000014858	-	99	80.374	ENSMMOG00000014501	-	99	81.682	Mola_mola
ENSCVAG00000014858	-	69	57.895	ENSMALG00000015445	rbm14b	83	57.662	Monopterus_albus
ENSCVAG00000014858	-	99	86.239	ENSNBRG00000004960	-	99	86.630	Neolamprologus_brichardi
ENSCVAG00000014858	-	51	62.319	ENSNBRG00000003378	rbm14b	75	62.319	Neolamprologus_brichardi
ENSCVAG00000014858	-	73	58.838	ENSONIG00000013035	rbm14b	82	58.647	Oreochromis_niloticus
ENSCVAG00000014858	-	100	75.579	ENSONIG00000008557	-	95	84.421	Oreochromis_niloticus
ENSCVAG00000014858	-	74	49.375	ENSORLG00000008051	rbm14b	83	48.133	Oryzias_latipes
ENSCVAG00000014858	-	100	83.514	ENSORLG00000001900	-	100	82.857	Oryzias_latipes
ENSCVAG00000014858	-	100	83.514	ENSORLG00020019144	-	100	82.857	Oryzias_latipes_hni
ENSCVAG00000014858	-	74	49.375	ENSORLG00020005551	rbm14b	81	48.133	Oryzias_latipes_hni
ENSCVAG00000014858	-	74	49.167	ENSORLG00015022683	rbm14b	83	47.925	Oryzias_latipes_hsok
ENSCVAG00000014858	-	100	83.514	ENSORLG00015000082	-	100	83.333	Oryzias_latipes_hsok
ENSCVAG00000014858	-	73	54.499	ENSOMEG00000000910	rbm14b	79	55.838	Oryzias_melastigma
ENSCVAG00000014858	-	79	88.199	ENSOMEG00000006508	-	96	92.000	Oryzias_melastigma
ENSCVAG00000014858	-	85	46.463	ENSPKIG00000009078	rbm14b	89	49.580	Paramormyrops_kingsleyae
ENSCVAG00000014858	-	72	61.053	ENSPMGG00000013064	rbm14b	66	62.094	Periophthalmus_magnuspinnatus
ENSCVAG00000014858	-	80	78.469	ENSPMGG00000018869	-	93	86.577	Periophthalmus_magnuspinnatus
ENSCVAG00000014858	-	100	91.794	ENSPFOG00000004843	-	100	92.748	Poecilia_formosa
ENSCVAG00000014858	-	74	48.354	ENSPFOG00000003614	rbm14b	83	48.247	Poecilia_formosa
ENSCVAG00000014858	-	74	47.531	ENSPLAG00000001395	rbm14b	83	47.737	Poecilia_latipinna
ENSCVAG00000014858	-	100	91.794	ENSPLAG00000017359	-	100	92.748	Poecilia_latipinna
ENSCVAG00000014858	-	100	92.196	ENSPMEG00000004894	-	100	93.103	Poecilia_mexicana
ENSCVAG00000014858	-	74	47.942	ENSPMEG00000012911	rbm14b	83	47.835	Poecilia_mexicana
ENSCVAG00000014858	-	100	91.794	ENSPREG00000007274	-	100	92.748	Poecilia_reticulata
ENSCVAG00000014858	-	74	47.119	ENSPREG00000003013	rbm14b	84	47.119	Poecilia_reticulata
ENSCVAG00000014858	-	74	62.319	ENSPNYG00000023605	rbm14b	77	61.268	Pundamilia_nyererei
ENSCVAG00000014858	-	100	85.842	ENSPNYG00000015906	-	100	86.535	Pundamilia_nyererei
ENSCVAG00000014858	-	70	62.132	ENSPNAG00000001977	rbm14b	83	48.008	Pygocentrus_nattereri
ENSCVAG00000014858	-	74	58.612	ENSPNAG00000012473	rbm14a	85	59.854	Pygocentrus_nattereri
ENSCVAG00000014858	-	79	48.880	ENSSFOG00015023796	rbm14b	94	47.710	Scleropages_formosus
ENSCVAG00000014858	-	74	63.406	ENSSMAG00000004522	rbm14b	81	62.105	Scophthalmus_maximus
ENSCVAG00000014858	-	100	84.116	ENSSMAG00000002055	-	100	83.755	Scophthalmus_maximus
ENSCVAG00000014858	-	72	62.319	ENSSDUG00000007975	rbm14b	66	62.278	Seriola_dumerili
ENSCVAG00000014858	-	100	84.767	ENSSDUG00000020756	-	100	85.125	Seriola_dumerili
ENSCVAG00000014858	-	100	84.314	ENSSLDG00000006311	-	100	84.670	Seriola_lalandi_dorsalis
ENSCVAG00000014858	-	72	62.319	ENSSLDG00000006472	rbm14b	66	62.278	Seriola_lalandi_dorsalis
ENSCVAG00000014858	-	99	87.156	ENSSPAG00000010825	-	99	87.156	Stegastes_partitus
ENSCVAG00000014858	-	71	62.319	ENSSPAG00000004231	rbm14b	65	62.278	Stegastes_partitus
ENSCVAG00000014858	-	69	60.345	ENSTRUG00000005716	rbm14b	68	60.345	Takifugu_rubripes
ENSCVAG00000014858	-	100	76.336	ENSTRUG00000009504	-	93	76.550	Takifugu_rubripes
ENSCVAG00000014858	-	69	54.090	ENSTNIG00000006844	rbm14b	79	54.229	Tetraodon_nigroviridis
ENSCVAG00000014858	-	100	67.455	ENSTNIG00000000058	-	100	76.149	Tetraodon_nigroviridis
ENSCVAG00000014858	-	99	91.250	ENSXCOG00000006825	-	99	92.083	Xiphophorus_couchianus
ENSCVAG00000014858	-	74	47.942	ENSXMAG00000008390	rbm14b	83	47.835	Xiphophorus_maculatus
ENSCVAG00000014858	-	100	92.377	ENSXMAG00000000338	-	100	93.103	Xiphophorus_maculatus