EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000014869 (Gene tree)
Gene ID: 107087450
Gene Symbol: alyref
Alias: tho4|thoc4|zgc:171753
Full Name: THO complex subunit 4-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 4437 bases
Position: chrKL652684.1:199651-204087
Accession: 107087450
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000012450	RRM_1	PF00076.22	1.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000019702	-	2339	XM_015379022	ENSCVAP00000012450	268 (aa)	XP_015234508	UPI000742BD2B

Gene Model

Click here to download ENSCVAG00000014869's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000014869's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000014869	alyref	100	50.554	ENSCVAG00000007789	-	100	45.255

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000014869	alyref	100	55.678	ENSAPOG00000000183	-	100	55.147	Acanthochromis_polyacanthus
ENSCVAG00000014869	alyref	100	54.007	ENSACIG00000020351	-	100	52.817	Amphilophus_citrinellus
ENSCVAG00000014869	alyref	99	79.336	ENSACIG00000006351	alyref	98	80.586	Amphilophus_citrinellus
ENSCVAG00000014869	alyref	100	81.618	ENSAOCG00000014012	alyref	100	83.088	Amphiprion_ocellaris
ENSCVAG00000014869	alyref	100	54.412	ENSAOCG00000019305	-	100	53.309	Amphiprion_ocellaris
ENSCVAG00000014869	alyref	100	55.147	ENSAPEG00000013527	-	100	53.309	Amphiprion_percula
ENSCVAG00000014869	alyref	100	81.618	ENSAPEG00000014603	alyref	100	83.088	Amphiprion_percula
ENSCVAG00000014869	alyref	100	55.516	ENSATEG00000000382	-	100	56.250	Anabas_testudineus
ENSCVAG00000014869	alyref	100	79.856	ENSATEG00000004307	alyref	100	82.374	Anabas_testudineus
ENSCVAG00000014869	alyref	50	72.263	ENSAPLG00000014745	-	100	72.464	Anas_platyrhynchos
ENSCVAG00000014869	alyref	100	54.122	ENSACLG00000010184	-	100	55.235	Astatotilapia_calliptera
ENSCVAG00000014869	alyref	100	80.952	ENSACLG00000008432	alyref	100	89.377	Astatotilapia_calliptera
ENSCVAG00000014869	alyref	100	73.929	ENSAMXG00000007359	alyref	100	75.714	Astyanax_mexicanus
ENSCVAG00000014869	alyref	99	46.763	ENSCING00000013568	-	99	45.520	Ciona_intestinalis
ENSCVAG00000014869	alyref	99	43.333	ENSCSAVG00000003324	-	99	43.123	Ciona_savignyi
ENSCVAG00000014869	alyref	100	81.250	ENSCSEG00000017800	alyref	100	82.721	Cynoglossus_semilaevis
ENSCVAG00000014869	alyref	100	77.580	ENSDARG00000077732	alyref	100	75.000	Danio_rerio
ENSCVAG00000014869	alyref	97	47.350	FBgn0010774	Ref1	73	45.411	Drosophila_melanogaster
ENSCVAG00000014869	alyref	99	55.849	ENSEBUG00000008253	alyref	95	50.189	Eptatretus_burgeri
ENSCVAG00000014869	alyref	72	45.226	ENSEBUG00000006305	alyref	100	41.877	Eptatretus_burgeri
ENSCVAG00000014869	alyref	100	73.897	ENSELUG00000017178	alyref	100	72.426	Esox_lucius
ENSCVAG00000014869	alyref	100	71.942	ENSELUG00000008849	-	100	64.029	Esox_lucius
ENSCVAG00000014869	alyref	59	77.215	ENSFALG00000011923	-	96	75.325	Ficedula_albicollis
ENSCVAG00000014869	alyref	100	83.333	ENSFHEG00000019426	alyref	100	85.926	Fundulus_heteroclitus
ENSCVAG00000014869	alyref	100	50.741	ENSFHEG00000004698	-	100	49.265	Fundulus_heteroclitus
ENSCVAG00000014869	alyref	69	62.500	ENSGMOG00000013122	-	100	60.417	Gadus_morhua
ENSCVAG00000014869	alyref	100	70.000	ENSGMOG00000009882	alyref	100	72.491	Gadus_morhua
ENSCVAG00000014869	alyref	100	85.714	ENSGAFG00000006014	alyref	100	82.784	Gambusia_affinis
ENSCVAG00000014869	alyref	100	49.084	ENSGAFG00000007573	-	100	46.691	Gambusia_affinis
ENSCVAG00000014869	alyref	100	55.160	ENSHBUG00000001454	-	100	54.839	Haplochromis_burtoni
ENSCVAG00000014869	alyref	100	80.952	ENSHBUG00000020196	alyref	100	89.377	Haplochromis_burtoni
ENSCVAG00000014869	alyref	98	49.446	ENSHCOG00000012825	-	94	47.566	Hippocampus_comes
ENSCVAG00000014869	alyref	100	73.188	ENSIPUG00000009469	alyref	100	73.091	Ictalurus_punctatus
ENSCVAG00000014869	alyref	74	64.500	ENSSTOG00000016570	-	92	63.492	Ictidomys_tridecemlineatus
ENSCVAG00000014869	alyref	100	80.657	ENSKMAG00000008912	alyref	100	81.685	Kryptolebias_marmoratus
ENSCVAG00000014869	alyref	100	52.768	ENSKMAG00000006462	-	100	51.292	Kryptolebias_marmoratus
ENSCVAG00000014869	alyref	100	84.364	ENSLBEG00000023118	alyref	90	80.000	Labrus_bergylta
ENSCVAG00000014869	alyref	99	48.897	ENSLBEG00000012930	-	99	49.077	Labrus_bergylta
ENSCVAG00000014869	alyref	100	50.347	ENSLBEG00000005387	-	100	50.871	Labrus_bergylta
ENSCVAG00000014869	alyref	78	70.968	ENSLOCG00000013879	alyref	89	65.581	Lepisosteus_oculatus
ENSCVAG00000014869	alyref	100	83.456	ENSMAMG00000003034	alyref	100	83.088	Mastacembelus_armatus
ENSCVAG00000014869	alyref	100	53.069	ENSMAMG00000005464	-	100	52.574	Mastacembelus_armatus
ENSCVAG00000014869	alyref	100	80.952	ENSMZEG00005008639	alyref	100	89.377	Maylandia_zebra
ENSCVAG00000014869	alyref	100	54.122	ENSMZEG00005012096	-	100	54.874	Maylandia_zebra
ENSCVAG00000014869	alyref	99	80.827	ENSMMOG00000012458	alyref	97	81.413	Mola_mola
ENSCVAG00000014869	alyref	99	49.438	ENSMMOG00000007032	-	98	44.484	Mola_mola
ENSCVAG00000014869	alyref	100	53.521	ENSMALG00000006054	-	100	52.158	Monopterus_albus
ENSCVAG00000014869	alyref	100	57.143	ENSMLUG00000006521	-	100	54.152	Myotis_lucifugus
ENSCVAG00000014869	alyref	100	60.650	ENSMLUG00000004098	-	100	55.235	Myotis_lucifugus
ENSCVAG00000014869	alyref	98	55.357	ENSMLUG00000022467	-	98	52.688	Myotis_lucifugus
ENSCVAG00000014869	alyref	98	57.037	ENSMLUG00000022178	-	98	53.532	Myotis_lucifugus
ENSCVAG00000014869	alyref	100	59.783	ENSMLUG00000014372	-	100	56.318	Myotis_lucifugus
ENSCVAG00000014869	alyref	98	58.242	ENSMLUG00000030671	-	99	55.957	Myotis_lucifugus
ENSCVAG00000014869	alyref	98	54.874	ENSMLUG00000028605	-	98	54.874	Myotis_lucifugus
ENSCVAG00000014869	alyref	98	54.945	ENSMLUG00000009247	-	98	55.556	Myotis_lucifugus
ENSCVAG00000014869	alyref	100	69.373	ENSNGAG00000022014	-	100	67.537	Nannospalax_galili
ENSCVAG00000014869	alyref	100	54.874	ENSNBRG00000017460	-	100	56.000	Neolamprologus_brichardi
ENSCVAG00000014869	alyref	100	80.000	ENSNBRG00000001747	alyref	100	88.727	Neolamprologus_brichardi
ENSCVAG00000014869	alyref	100	80.935	ENSONIG00000019434	alyref	100	82.374	Oreochromis_niloticus
ENSCVAG00000014869	alyref	100	58.088	ENSONIG00000003296	-	100	58.824	Oreochromis_niloticus
ENSCVAG00000014869	alyref	99	41.587	ENSORLG00000001620	-	58	48.341	Oryzias_latipes
ENSCVAG00000014869	alyref	100	88.192	ENSORLG00020011942	alyref	100	90.037	Oryzias_latipes_hni
ENSCVAG00000014869	alyref	99	50.000	ENSORLG00020015673	-	99	48.708	Oryzias_latipes_hni
ENSCVAG00000014869	alyref	100	88.104	ENSORLG00015022664	alyref	100	89.591	Oryzias_latipes_hsok
ENSCVAG00000014869	alyref	99	50.365	ENSORLG00015015143	-	99	49.446	Oryzias_latipes_hsok
ENSCVAG00000014869	alyref	99	51.698	ENSOMEG00000007158	-	97	46.442	Oryzias_melastigma
ENSCVAG00000014869	alyref	100	87.037	ENSOMEG00000019176	alyref	100	84.074	Oryzias_melastigma
ENSCVAG00000014869	alyref	69	78.610	ENSPPAG00000036403	-	68	73.118	Pan_paniscus
ENSCVAG00000014869	alyref	100	74.632	ENSPKIG00000007070	alyref	100	69.485	Paramormyrops_kingsleyae
ENSCVAG00000014869	alyref	99	74.539	ENSPKIG00000006233	-	81	70.260	Paramormyrops_kingsleyae
ENSCVAG00000014869	alyref	99	83.521	ENSPMGG00000016600	alyref	91	78.358	Periophthalmus_magnuspinnatus
ENSCVAG00000014869	alyref	72	47.980	ENSPMGG00000012994	-	97	45.876	Periophthalmus_magnuspinnatus
ENSCVAG00000014869	alyref	100	66.418	ENSPEMG00000016628	-	100	63.806	Peromyscus_maniculatus_bairdii
ENSCVAG00000014869	alyref	100	84.307	ENSPFOG00000022825	alyref	99	81.022	Poecilia_formosa
ENSCVAG00000014869	alyref	100	49.275	ENSPFOG00000017094	-	100	47.794	Poecilia_formosa
ENSCVAG00000014869	alyref	100	84.249	ENSPLAG00000006948	alyref	100	81.319	Poecilia_latipinna
ENSCVAG00000014869	alyref	100	49.275	ENSPLAG00000014380	-	100	47.794	Poecilia_latipinna
ENSCVAG00000014869	alyref	100	49.275	ENSPMEG00000023039	-	100	47.794	Poecilia_mexicana
ENSCVAG00000014869	alyref	100	84.307	ENSPMEG00000003547	alyref	100	81.022	Poecilia_mexicana
ENSCVAG00000014869	alyref	100	50.735	ENSPREG00000003649	-	100	48.519	Poecilia_reticulata
ENSCVAG00000014869	alyref	100	84.615	ENSPREG00000015795	alyref	100	81.685	Poecilia_reticulata
ENSCVAG00000014869	alyref	100	80.952	ENSPNYG00000017498	alyref	100	89.377	Pundamilia_nyererei
ENSCVAG00000014869	alyref	99	52.768	ENSPNYG00000002879	-	98	53.309	Pundamilia_nyererei
ENSCVAG00000014869	alyref	100	77.536	ENSPNAG00000002531	alyref	100	69.565	Pygocentrus_nattereri
ENSCVAG00000014869	alyref	73	76.650	ENSSBOG00000030924	-	87	71.795	Saimiri_boliviensis_boliviensis
ENSCVAG00000014869	alyref	99	55.224	ENSSHAG00000012866	-	99	53.358	Sarcophilus_harrisii
ENSCVAG00000014869	alyref	99	57.664	ENSSHAG00000000609	-	99	53.506	Sarcophilus_harrisii
ENSCVAG00000014869	alyref	70	76.596	ENSSFOG00015003678	alyref	83	73.936	Scleropages_formosus
ENSCVAG00000014869	alyref	78	79.048	ENSSFOG00015003923	alyref	73	76.667	Scleropages_formosus
ENSCVAG00000014869	alyref	100	78.832	ENSSMAG00000009283	alyref	100	82.847	Scophthalmus_maximus
ENSCVAG00000014869	alyref	100	51.601	ENSSMAG00000011169	-	100	56.566	Scophthalmus_maximus
ENSCVAG00000014869	alyref	100	81.250	ENSSDUG00000016158	alyref	100	83.088	Seriola_dumerili
ENSCVAG00000014869	alyref	100	79.487	ENSSLDG00000017803	alyref	100	83.150	Seriola_lalandi_dorsalis
ENSCVAG00000014869	alyref	99	54.579	ENSSPAG00000017028	-	96	54.647	Stegastes_partitus
ENSCVAG00000014869	alyref	100	52.650	ENSTRUG00000003051	-	100	50.181	Takifugu_rubripes
ENSCVAG00000014869	alyref	100	79.562	ENSTNIG00000011595	alyref	100	76.923	Tetraodon_nigroviridis
ENSCVAG00000014869	alyref	100	52.000	ENSTNIG00000014136	-	100	46.863	Tetraodon_nigroviridis
ENSCVAG00000014869	alyref	71	75.916	ENSVVUG00000000272	-	82	74.074	Vulpes_vulpes
ENSCVAG00000014869	alyref	99	84.444	ENSXCOG00000018047	alyref	99	80.586	Xiphophorus_couchianus
ENSCVAG00000014869	alyref	100	51.282	ENSXMAG00000018086	-	100	48.529	Xiphophorus_maculatus
ENSCVAG00000014869	alyref	99	84.815	ENSXMAG00000012218	alyref	99	80.952	Xiphophorus_maculatus