EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000014935 (Gene tree)
Gene ID: 107085268
Gene Symbol: casc3
Alias: -
Full Name: CASC3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 10765 bases
Position: chrKL652619.1:93942-104706
Accession: 107085268
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000028105	Btz	PF09405.10	8e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000019803	-	2232	XM_015375511	ENSCVAP00000028105	736 (aa)	XP_015230997	UPI0007425FFB

Gene Model

Click here to download ENSCVAG00000014935's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000014935's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000014935	casc3	77	53.226	ENSG00000108349	CASC3	98	35.075	Homo_sapiens
ENSCVAG00000014935	casc3	100	69.041	ENSAPOG00000008467	casc3	100	68.903	Acanthochromis_polyacanthus
ENSCVAG00000014935	casc3	100	70.649	ENSAOCG00000016676	casc3	100	70.795	Amphiprion_ocellaris
ENSCVAG00000014935	casc3	100	70.757	ENSAPEG00000006787	casc3	100	71.822	Amphiprion_percula
ENSCVAG00000014935	casc3	100	72.144	ENSATEG00000017196	casc3	100	72.529	Anabas_testudineus
ENSCVAG00000014935	casc3	60	63.235	ENSANAG00000031954	-	84	64.216	Aotus_nancymaae
ENSCVAG00000014935	casc3	79	52.733	ENSANAG00000034820	-	68	65.179	Aotus_nancymaae
ENSCVAG00000014935	casc3	100	74.708	ENSACLG00000016198	casc3	100	73.874	Astatotilapia_calliptera
ENSCVAG00000014935	casc3	80	54.489	ENSCJAG00000016032	CASC3	65	71.223	Callithrix_jacchus
ENSCVAG00000014935	casc3	77	54.839	ENSCAFG00020018882	CASC3	90	55.418	Canis_lupus_dingo
ENSCVAG00000014935	casc3	77	55.229	ENSCATG00000033593	CASC3	74	56.656	Cercocebus_atys
ENSCVAG00000014935	casc3	77	55.229	ENSCSAG00000002777	CASC3	74	56.656	Chlorocebus_sabaeus
ENSCVAG00000014935	casc3	100	63.258	ENSCSEG00000010047	casc3	79	66.083	Cynoglossus_semilaevis
ENSCVAG00000014935	casc3	99	46.252	ENSDNOG00000017249	CASC3	73	55.418	Dasypus_novemcinctus
ENSCVAG00000014935	casc3	88	36.335	ENSEBUG00000010654	casc3	70	49.664	Eptatretus_burgeri
ENSCVAG00000014935	casc3	80	55.627	ENSEASG00005002909	CASC3	82	55.556	Equus_asinus_asinus
ENSCVAG00000014935	casc3	100	58.448	ENSELUG00000015093	casc3	100	56.258	Esox_lucius
ENSCVAG00000014935	casc3	100	80.369	ENSFHEG00000015793	casc3	100	79.501	Fundulus_heteroclitus
ENSCVAG00000014935	casc3	93	46.910	ENSGALG00000031813	CASC3	78	56.151	Gallus_gallus
ENSCVAG00000014935	casc3	98	80.713	ENSGAFG00000017148	casc3	86	80.658	Gambusia_affinis
ENSCVAG00000014935	casc3	81	47.218	ENSGAGG00000008432	CASC3	75	68.345	Gopherus_agassizii
ENSCVAG00000014935	casc3	77	53.871	ENSGGOG00000005067	CASC3	65	69.065	Gorilla_gorilla
ENSCVAG00000014935	casc3	100	74.838	ENSHBUG00000013155	casc3	100	74.003	Haplochromis_burtoni
ENSCVAG00000014935	casc3	100	62.665	ENSHCOG00000002664	casc3	95	59.944	Hippocampus_comes
ENSCVAG00000014935	casc3	92	75.102	ENSKMAG00000019507	casc3	99	73.984	Kryptolebias_marmoratus
ENSCVAG00000014935	casc3	96	67.436	ENSLBEG00000005435	casc3	79	69.702	Labrus_bergylta
ENSCVAG00000014935	casc3	99	41.479	ENSLACG00000013200	CASC3	73	51.376	Latimeria_chalumnae
ENSCVAG00000014935	casc3	71	64.807	ENSLOCG00000013518	casc3	64	64.807	Lepisosteus_oculatus
ENSCVAG00000014935	casc3	77	55.229	ENSMFAG00000041496	CASC3	81	56.656	Macaca_fascicularis
ENSCVAG00000014935	casc3	77	55.229	ENSMMUG00000045187	CASC3	74	56.656	Macaca_mulatta
ENSCVAG00000014935	casc3	68	55.856	ENSMLEG00000029049	CASC3	71	69.784	Mandrillus_leucophaeus
ENSCVAG00000014935	casc3	96	67.470	ENSMAMG00000005235	casc3	96	68.850	Mastacembelus_armatus
ENSCVAG00000014935	casc3	100	74.708	ENSMZEG00005003815	casc3	100	73.874	Maylandia_zebra
ENSCVAG00000014935	casc3	100	67.969	ENSMMOG00000014339	casc3	100	68.152	Mola_mola
ENSCVAG00000014935	casc3	65	70.504	ENSMALG00000019771	casc3	84	85.600	Monopterus_albus
ENSCVAG00000014935	casc3	77	56.129	ENSNLEG00000001598	CASC3	65	69.065	Nomascus_leucogenys
ENSCVAG00000014935	casc3	100	74.069	ENSONIG00000009337	casc3	100	73.111	Oreochromis_niloticus
ENSCVAG00000014935	casc3	52	48.469	ENSOANG00000003499	-	63	57.971	Ornithorhynchus_anatinus
ENSCVAG00000014935	casc3	100	72.460	ENSORLG00000023125	casc3	100	70.950	Oryzias_latipes
ENSCVAG00000014935	casc3	77	53.871	ENSPPAG00000035069	CASC3	66	69.065	Pan_paniscus
ENSCVAG00000014935	casc3	60	57.865	ENSPTIG00000010891	CASC3	74	55.728	Panthera_tigris_altaica
ENSCVAG00000014935	casc3	77	54.902	ENSPANG00000021708	CASC3	64	69.784	Papio_anubis
ENSCVAG00000014935	casc3	99	77.188	ENSPFOG00000017632	casc3	98	77.188	Poecilia_formosa
ENSCVAG00000014935	casc3	100	81.429	ENSPLAG00000005268	casc3	100	80.260	Poecilia_latipinna
ENSCVAG00000014935	casc3	62	95.312	ENSPMEG00000010299	casc3	76	95.312	Poecilia_mexicana
ENSCVAG00000014935	casc3	71	93.750	ENSPREG00000011856	casc3	84	93.750	Poecilia_reticulata
ENSCVAG00000014935	casc3	76	54.545	ENSPPYG00000008467	CASC3	75	55.963	Pongo_abelii
ENSCVAG00000014935	casc3	100	74.838	ENSPNYG00000011962	casc3	100	74.003	Pundamilia_nyererei
ENSCVAG00000014935	casc3	78	55.763	ENSRNOG00000009716	Casc3	81	56.173	Rattus_norvegicus
ENSCVAG00000014935	casc3	100	67.211	ENSSMAG00000016096	casc3	100	68.040	Scophthalmus_maximus
ENSCVAG00000014935	casc3	100	69.819	ENSSDUG00000016893	casc3	95	72.186	Seriola_dumerili
ENSCVAG00000014935	casc3	80	74.170	ENSSLDG00000020308	casc3	97	77.177	Seriola_lalandi_dorsalis
ENSCVAG00000014935	casc3	51	60.227	ENSSARG00000010378	CASC3	62	70.149	Sorex_araneus
ENSCVAG00000014935	casc3	100	73.488	ENSSPAG00000023008	casc3	100	70.914	Stegastes_partitus
ENSCVAG00000014935	casc3	74	54.839	ENSSSCG00000017477	CASC3	71	69.784	Sus_scrofa
ENSCVAG00000014935	casc3	74	46.783	ENSTGUG00000002300	CASC3	58	54.777	Taeniopygia_guttata
ENSCVAG00000014935	casc3	96	68.094	ENSTRUG00000000673	casc3	95	66.852	Takifugu_rubripes
ENSCVAG00000014935	casc3	100	63.012	ENSTNIG00000003208	casc3	53	68.802	Tetraodon_nigroviridis
ENSCVAG00000014935	casc3	51	57.292	ENSTTRG00000016896	CASC3	62	73.134	Tursiops_truncatus
ENSCVAG00000014935	casc3	77	55.627	ENSUAMG00000015116	CASC3	90	55.418	Ursus_americanus
ENSCVAG00000014935	casc3	66	55.305	ENSUMAG00000017697	CASC3	85	67.626	Ursus_maritimus
ENSCVAG00000014935	casc3	100	81.193	ENSXMAG00000013937	casc3	100	80.804	Xiphophorus_maculatus