EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000014960 (Gene tree)
Gene ID: 107097041
Gene Symbol: thumpd1
Alias: zgc:77221
Full Name: THUMP domain containing 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 6662 bases
Position: chrKL653167.1:173635-180296
Accession: 107097041
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000012545	THUMP	PF02926.17	1.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000019827	-	2270	XM_015394009	ENSCVAP00000012545	323 (aa)	XP_015249495	UPI000742ADC9

Gene Model

Click here to download ENSCVAG00000014960's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000014960's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000014960	thumpd1	89	56.291	ENSG00000066654	THUMPD1	78	59.859	Homo_sapiens
ENSCVAG00000014960	thumpd1	100	78.947	ENSAPOG00000008440	thumpd1	90	83.448	Acanthochromis_polyacanthus
ENSCVAG00000014960	thumpd1	97	53.731	ENSAMEG00000006257	THUMPD1	74	60.364	Ailuropoda_melanoleuca
ENSCVAG00000014960	thumpd1	89	77.855	ENSACIG00000024395	thumpd1	87	77.855	Amphilophus_citrinellus
ENSCVAG00000014960	thumpd1	100	78.395	ENSAOCG00000003509	thumpd1	90	82.699	Amphiprion_ocellaris
ENSCVAG00000014960	thumpd1	100	78.638	ENSAPEG00000010515	thumpd1	90	82.699	Amphiprion_percula
ENSCVAG00000014960	thumpd1	100	79.630	ENSATEG00000004737	thumpd1	90	85.069	Anabas_testudineus
ENSCVAG00000014960	thumpd1	88	58.824	ENSAPLG00000015259	THUMPD1	88	63.780	Anas_platyrhynchos
ENSCVAG00000014960	thumpd1	52	58.286	ENSACAG00000022881	-	81	64.430	Anolis_carolinensis
ENSCVAG00000014960	thumpd1	84	57.193	ENSACAG00000009625	-	89	57.193	Anolis_carolinensis
ENSCVAG00000014960	thumpd1	89	55.629	ENSANAG00000026882	-	78	58.803	Aotus_nancymaae
ENSCVAG00000014960	thumpd1	93	48.026	ENSANAG00000027311	-	79	49.643	Aotus_nancymaae
ENSCVAG00000014960	thumpd1	95	45.223	ENSANAG00000027040	-	75	47.535	Aotus_nancymaae
ENSCVAG00000014960	thumpd1	96	74.757	ENSACLG00000004830	thumpd1	90	77.586	Astatotilapia_calliptera
ENSCVAG00000014960	thumpd1	98	60.252	ENSAMXG00000012356	thumpd1	85	63.475	Astyanax_mexicanus
ENSCVAG00000014960	thumpd1	92	57.383	ENSBTAG00000047673	THUMPD1	78	59.220	Bos_taurus
ENSCVAG00000014960	thumpd1	92	55.016	ENSCJAG00000009499	THUMPD1	78	59.155	Callithrix_jacchus
ENSCVAG00000014960	thumpd1	98	55.312	ENSCAFG00000017985	THUMPD1	75	59.567	Canis_familiaris
ENSCVAG00000014960	thumpd1	98	55.312	ENSCAFG00020021861	THUMPD1	75	59.567	Canis_lupus_dingo
ENSCVAG00000014960	thumpd1	92	58.054	ENSCHIG00000010134	THUMPD1	78	59.220	Capra_hircus
ENSCVAG00000014960	thumpd1	89	56.997	ENSTSYG00000011537	THUMPD1	75	60.294	Carlito_syrichta
ENSCVAG00000014960	thumpd1	81	62.222	ENSCPOG00000008919	-	75	61.852	Cavia_porcellus
ENSCVAG00000014960	thumpd1	81	62.222	ENSCPOG00000023684	-	75	61.852	Cavia_porcellus
ENSCVAG00000014960	thumpd1	89	55.629	ENSCCAG00000030205	THUMPD1	78	59.155	Cebus_capucinus
ENSCVAG00000014960	thumpd1	87	54.610	ENSCCAG00000019379	-	63	58.984	Cebus_capucinus
ENSCVAG00000014960	thumpd1	89	56.623	ENSCATG00000040309	THUMPD1	78	60.211	Cercocebus_atys
ENSCVAG00000014960	thumpd1	89	47.541	ENSCATG00000020844	-	80	48.649	Cercocebus_atys
ENSCVAG00000014960	thumpd1	87	59.516	ENSCLAG00000016508	THUMPD1	80	58.885	Chinchilla_lanigera
ENSCVAG00000014960	thumpd1	89	56.623	ENSCSAG00000007610	THUMPD1	78	60.211	Chlorocebus_sabaeus
ENSCVAG00000014960	thumpd1	91	45.302	ENSCSAG00000009860	-	62	46.454	Chlorocebus_sabaeus
ENSCVAG00000014960	thumpd1	97	52.890	ENSCHOG00000005587	THUMPD1	71	62.308	Choloepus_hoffmanni
ENSCVAG00000014960	thumpd1	93	59.477	ENSCPBG00000019055	THUMPD1	74	65.530	Chrysemys_picta_bellii
ENSCVAG00000014960	thumpd1	77	30.970	ENSCING00000021274	-	94	30.597	Ciona_intestinalis
ENSCVAG00000014960	thumpd1	80	52.830	ENSCANG00000038770	THUMPD1	65	64.500	Colobus_angolensis_palliatus
ENSCVAG00000014960	thumpd1	80	50.562	ENSCANG00000035822	-	83	51.938	Colobus_angolensis_palliatus
ENSCVAG00000014960	thumpd1	95	54.434	ENSCGRG00001014829	Thumpd1	72	62.308	Cricetulus_griseus_chok1gshd
ENSCVAG00000014960	thumpd1	95	54.434	ENSCGRG00000000060	Thumpd1	72	62.308	Cricetulus_griseus_crigri
ENSCVAG00000014960	thumpd1	92	74.587	ENSCSEG00000002041	thumpd1	86	81.481	Cynoglossus_semilaevis
ENSCVAG00000014960	thumpd1	86	61.511	ENSDARG00000100264	thumpd1	79	61.290	Danio_rerio
ENSCVAG00000014960	thumpd1	89	58.562	ENSDNOG00000043510	THUMPD1	78	58.246	Dasypus_novemcinctus
ENSCVAG00000014960	thumpd1	78	61.776	ENSDORG00000028216	Thumpd1	73	61.776	Dipodomys_ordii
ENSCVAG00000014960	thumpd1	85	32.653	FBgn0035532	CG15014	79	32.830	Drosophila_melanogaster
ENSCVAG00000014960	thumpd1	89	53.287	ENSETEG00000002763	THUMPD1	60	56.420	Echinops_telfairi
ENSCVAG00000014960	thumpd1	80	43.233	ENSEBUG00000011011	THUMPD1	72	42.910	Eptatretus_burgeri
ENSCVAG00000014960	thumpd1	84	59.567	ENSECAG00000005354	THUMPD1	75	59.206	Equus_caballus
ENSCVAG00000014960	thumpd1	86	59.298	ENSEEUG00000011256	THUMPD1	68	59.298	Erinaceus_europaeus
ENSCVAG00000014960	thumpd1	83	78.358	ENSELUG00000013612	thumpd1	63	78.731	Esox_lucius
ENSCVAG00000014960	thumpd1	92	57.475	ENSFCAG00000039296	THUMPD1	75	59.928	Felis_catus
ENSCVAG00000014960	thumpd1	73	62.762	ENSFALG00000014029	THUMPD1	86	62.762	Ficedula_albicollis
ENSCVAG00000014960	thumpd1	90	89.726	ENSFHEG00000013319	thumpd1	88	87.869	Fundulus_heteroclitus
ENSCVAG00000014960	thumpd1	94	70.395	ENSGMOG00000003369	thumpd1	89	72.378	Gadus_morhua
ENSCVAG00000014960	thumpd1	56	59.677	ENSGALG00000031384	-	79	62.209	Gallus_gallus
ENSCVAG00000014960	thumpd1	100	87.077	ENSGAFG00000011000	thumpd1	100	87.077	Gambusia_affinis
ENSCVAG00000014960	thumpd1	96	76.849	ENSGACG00000019511	thumpd1	89	80.756	Gasterosteus_aculeatus
ENSCVAG00000014960	thumpd1	93	59.477	ENSGAGG00000008225	THUMPD1	80	67.054	Gopherus_agassizii
ENSCVAG00000014960	thumpd1	77	44.574	ENSGGOG00000043232	-	61	55.435	Gorilla_gorilla
ENSCVAG00000014960	thumpd1	89	56.291	ENSGGOG00000005231	-	63	59.859	Gorilla_gorilla
ENSCVAG00000014960	thumpd1	96	75.081	ENSHBUG00000017996	thumpd1	90	77.931	Haplochromis_burtoni
ENSCVAG00000014960	thumpd1	86	59.649	ENSHGLG00000011001	-	79	59.298	Heterocephalus_glaber_female
ENSCVAG00000014960	thumpd1	86	60.000	ENSHGLG00100016023	THUMPD1	79	59.649	Heterocephalus_glaber_male
ENSCVAG00000014960	thumpd1	74	71.429	ENSHCOG00000008618	thumpd1	56	71.008	Hippocampus_comes
ENSCVAG00000014960	thumpd1	72	66.953	ENSIPUG00000012500	thumpd1	68	59.375	Ictalurus_punctatus
ENSCVAG00000014960	thumpd1	81	61.481	ENSSTOG00000007011	THUMPD1	75	61.481	Ictidomys_tridecemlineatus
ENSCVAG00000014960	thumpd1	95	54.045	ENSJJAG00000004295	-	72	60.392	Jaculus_jaculus
ENSCVAG00000014960	thumpd1	88	62.021	ENSKMAG00000009545	thumpd1	69	62.324	Kryptolebias_marmoratus
ENSCVAG00000014960	thumpd1	89	80.208	ENSLBEG00000009349	thumpd1	89	80.208	Labrus_bergylta
ENSCVAG00000014960	thumpd1	80	62.021	ENSLACG00000005833	THUMPD1	78	62.021	Latimeria_chalumnae
ENSCVAG00000014960	thumpd1	92	62.662	ENSLOCG00000000854	thumpd1	85	68.914	Lepisosteus_oculatus
ENSCVAG00000014960	thumpd1	89	58.503	ENSLAFG00000025838	THUMPD1	79	58.885	Loxodonta_africana
ENSCVAG00000014960	thumpd1	80	49.077	ENSMFAG00000041474	-	82	50.382	Macaca_fascicularis
ENSCVAG00000014960	thumpd1	89	56.623	ENSMFAG00000036996	THUMPD1	78	60.211	Macaca_fascicularis
ENSCVAG00000014960	thumpd1	89	56.623	ENSMMUG00000004225	THUMPD1	78	60.211	Macaca_mulatta
ENSCVAG00000014960	thumpd1	80	49.077	ENSMMUG00000038414	-	82	50.382	Macaca_mulatta
ENSCVAG00000014960	thumpd1	89	56.623	ENSMNEG00000020726	THUMPD1	78	60.211	Macaca_nemestrina
ENSCVAG00000014960	thumpd1	80	48.708	ENSMNEG00000038856	-	82	50.000	Macaca_nemestrina
ENSCVAG00000014960	thumpd1	89	56.623	ENSMLEG00000036436	THUMPD1	78	60.211	Mandrillus_leucophaeus
ENSCVAG00000014960	thumpd1	80	49.442	ENSMLEG00000030012	-	82	50.769	Mandrillus_leucophaeus
ENSCVAG00000014960	thumpd1	96	77.097	ENSMAMG00000006858	thumpd1	86	79.859	Mastacembelus_armatus
ENSCVAG00000014960	thumpd1	96	75.081	ENSMZEG00005013693	thumpd1	90	77.931	Maylandia_zebra
ENSCVAG00000014960	thumpd1	63	61.650	ENSMGAG00000010340	THUMPD1	99	61.951	Meleagris_gallopavo
ENSCVAG00000014960	thumpd1	93	52.761	ENSMAUG00000013306	Thumpd1	72	61.868	Mesocricetus_auratus
ENSCVAG00000014960	thumpd1	72	51.282	ENSMICG00000030865	-	67	51.282	Microcebus_murinus
ENSCVAG00000014960	thumpd1	87	58.392	ENSMICG00000038483	-	79	58.392	Microcebus_murinus
ENSCVAG00000014960	thumpd1	92	54.921	ENSMOCG00000003447	Thumpd1	72	61.923	Microtus_ochrogaster
ENSCVAG00000014960	thumpd1	84	78.261	ENSMMOG00000011323	thumpd1	81	76.812	Mola_mola
ENSCVAG00000014960	thumpd1	96	56.575	ENSMODG00000006971	-	76	61.131	Monodelphis_domestica
ENSCVAG00000014960	thumpd1	96	56.966	ENSMODG00000024776	-	77	61.484	Monodelphis_domestica
ENSCVAG00000014960	thumpd1	84	84.815	ENSMALG00000019522	thumpd1	91	81.754	Monopterus_albus
ENSCVAG00000014960	thumpd1	79	62.646	MGP_CAROLIEiJ_G0030382	Thumpd1	73	62.646	Mus_caroli
ENSCVAG00000014960	thumpd1	98	54.206	ENSMUSG00000030942	Thumpd1	73	62.646	Mus_musculus
ENSCVAG00000014960	thumpd1	79	62.791	MGP_PahariEiJ_G0013593	Thumpd1	73	62.791	Mus_pahari
ENSCVAG00000014960	thumpd1	84	61.397	ENSMLUG00000010547	THUMPD1	86	55.484	Myotis_lucifugus
ENSCVAG00000014960	thumpd1	81	61.194	ENSNGAG00000018643	Thumpd1	75	61.194	Nannospalax_galili
ENSCVAG00000014960	thumpd1	96	75.081	ENSNBRG00000006987	thumpd1	84	77.931	Neolamprologus_brichardi
ENSCVAG00000014960	thumpd1	84	59.353	ENSNLEG00000012369	THUMPD1	73	63.462	Nomascus_leucogenys
ENSCVAG00000014960	thumpd1	97	41.590	ENSOPRG00000011342	THUMPD1	51	65.541	Ochotona_princeps
ENSCVAG00000014960	thumpd1	79	62.308	ENSODEG00000012360	THUMPD1	72	61.923	Octodon_degus
ENSCVAG00000014960	thumpd1	88	79.505	ENSONIG00000000146	thumpd1	99	79.505	Oreochromis_niloticus
ENSCVAG00000014960	thumpd1	96	55.484	ENSOANG00000014297	THUMPD1	69	61.569	Ornithorhynchus_anatinus
ENSCVAG00000014960	thumpd1	87	60.839	ENSOCUG00000009895	-	79	60.839	Oryctolagus_cuniculus
ENSCVAG00000014960	thumpd1	54	57.955	ENSOCUG00000025354	-	72	62.112	Oryctolagus_cuniculus
ENSCVAG00000014960	thumpd1	83	81.273	ENSORLG00000027557	thumpd1	86	81.273	Oryzias_latipes
ENSCVAG00000014960	thumpd1	90	75.862	ENSORLG00020010206	thumpd1	91	75.862	Oryzias_latipes_hni
ENSCVAG00000014960	thumpd1	90	75.172	ENSORLG00015009581	thumpd1	91	75.172	Oryzias_latipes_hsok
ENSCVAG00000014960	thumpd1	85	79.487	ENSOMEG00000019361	thumpd1	88	76.027	Oryzias_melastigma
ENSCVAG00000014960	thumpd1	98	54.688	ENSOGAG00000026723	THUMPD1	72	61.538	Otolemur_garnettii
ENSCVAG00000014960	thumpd1	92	58.054	ENSOARG00000013107	THUMPD1	71	63.035	Ovis_aries
ENSCVAG00000014960	thumpd1	89	56.291	ENSPPAG00000033818	-	63	59.859	Pan_paniscus
ENSCVAG00000014960	thumpd1	80	49.254	ENSPPAG00000001653	-	79	50.579	Pan_paniscus
ENSCVAG00000014960	thumpd1	92	57.475	ENSPPRG00000014118	-	75	60.289	Panthera_pardus
ENSCVAG00000014960	thumpd1	92	57.143	ENSPTIG00000013856	-	75	59.928	Panthera_tigris_altaica
ENSCVAG00000014960	thumpd1	77	47.287	ENSPTRG00000046073	-	74	48.594	Pan_troglodytes
ENSCVAG00000014960	thumpd1	89	56.291	ENSPTRG00000007848	THUMPD1	63	59.859	Pan_troglodytes
ENSCVAG00000014960	thumpd1	80	49.446	ENSPANG00000034881	-	82	50.763	Papio_anubis
ENSCVAG00000014960	thumpd1	89	56.623	ENSPANG00000025507	THUMPD1	78	60.211	Papio_anubis
ENSCVAG00000014960	thumpd1	91	64.094	ENSPKIG00000014491	thumpd1	86	66.667	Paramormyrops_kingsleyae
ENSCVAG00000014960	thumpd1	78	64.729	ENSPSIG00000012430	THUMPD1	88	64.729	Pelodiscus_sinensis
ENSCVAG00000014960	thumpd1	80	83.398	ENSPMGG00000014479	thumpd1	90	83.012	Periophthalmus_magnuspinnatus
ENSCVAG00000014960	thumpd1	61	39.269	ENSPEMG00000002608	-	82	41.919	Peromyscus_maniculatus_bairdii
ENSCVAG00000014960	thumpd1	63	51.923	ENSPMAG00000001389	thumpd1	83	55.114	Petromyzon_marinus
ENSCVAG00000014960	thumpd1	96	57.632	ENSPCIG00000029241	THUMPD1	53	62.825	Phascolarctos_cinereus
ENSCVAG00000014960	thumpd1	100	86.239	ENSPFOG00000012649	thumpd1	100	86.239	Poecilia_formosa
ENSCVAG00000014960	thumpd1	100	85.890	ENSPLAG00000000137	thumpd1	100	85.890	Poecilia_latipinna
ENSCVAG00000014960	thumpd1	100	86.503	ENSPMEG00000007750	thumpd1	100	86.503	Poecilia_mexicana
ENSCVAG00000014960	thumpd1	79	92.996	ENSPREG00000000144	thumpd1	86	92.996	Poecilia_reticulata
ENSCVAG00000014960	thumpd1	78	53.462	ENSPPYG00000007160	-	68	64.921	Pongo_abelii
ENSCVAG00000014960	thumpd1	67	58.636	ENSPCAG00000001534	THUMPD1	72	61.084	Procavia_capensis
ENSCVAG00000014960	thumpd1	87	58.392	ENSPCOG00000024663	THUMPD1	79	58.392	Propithecus_coquereli
ENSCVAG00000014960	thumpd1	82	59.259	ENSPVAG00000005659	-	73	59.259	Pteropus_vampyrus
ENSCVAG00000014960	thumpd1	96	75.081	ENSPNYG00000007061	thumpd1	89	77.931	Pundamilia_nyererei
ENSCVAG00000014960	thumpd1	94	62.295	ENSPNAG00000024872	thumpd1	97	63.265	Pygocentrus_nattereri
ENSCVAG00000014960	thumpd1	50	59.563	ENSRNOG00000014946	AABR07005588.1	84	59.563	Rattus_norvegicus
ENSCVAG00000014960	thumpd1	80	51.685	ENSRBIG00000040136	-	86	53.101	Rhinopithecus_bieti
ENSCVAG00000014960	thumpd1	89	56.623	ENSRBIG00000040752	THUMPD1	78	60.211	Rhinopithecus_bieti
ENSCVAG00000014960	thumpd1	80	51.311	ENSRROG00000045699	-	86	52.713	Rhinopithecus_roxellana
ENSCVAG00000014960	thumpd1	89	56.623	ENSRROG00000042189	THUMPD1	78	60.211	Rhinopithecus_roxellana
ENSCVAG00000014960	thumpd1	71	30.859	YGL232W	-	86	30.859	Saccharomyces_cerevisiae
ENSCVAG00000014960	thumpd1	84	58.993	ENSSBOG00000034246	THUMPD1	73	63.077	Saimiri_boliviensis_boliviensis
ENSCVAG00000014960	thumpd1	97	58.360	ENSSHAG00000003853	THUMPD1	78	61.404	Sarcophilus_harrisii
ENSCVAG00000014960	thumpd1	94	58.117	ENSSFOG00015007512	thumpd1	85	59.859	Scleropages_formosus
ENSCVAG00000014960	thumpd1	99	75.684	ENSSMAG00000000723	thumpd1	86	84.452	Scophthalmus_maximus
ENSCVAG00000014960	thumpd1	100	78.638	ENSSDUG00000014502	thumpd1	90	83.737	Seriola_dumerili
ENSCVAG00000014960	thumpd1	100	78.638	ENSSLDG00000007694	thumpd1	90	83.737	Seriola_lalandi_dorsalis
ENSCVAG00000014960	thumpd1	89	59.184	ENSSPUG00000005096	THUMPD1	87	60.140	Sphenodon_punctatus
ENSCVAG00000014960	thumpd1	100	79.257	ENSSPAG00000006993	thumpd1	100	78.328	Stegastes_partitus
ENSCVAG00000014960	thumpd1	92	57.143	ENSSSCG00000024748	THUMPD1	78	58.947	Sus_scrofa
ENSCVAG00000014960	thumpd1	89	60.069	ENSTGUG00000009247	THUMPD1	92	64.706	Taeniopygia_guttata
ENSCVAG00000014960	thumpd1	100	76.074	ENSTRUG00000015656	thumpd1	89	80.903	Takifugu_rubripes
ENSCVAG00000014960	thumpd1	91	79.661	ENSTNIG00000001584	thumpd1	93	81.053	Tetraodon_nigroviridis
ENSCVAG00000014960	thumpd1	80	61.597	ENSTBEG00000005252	THUMPD1	76	54.693	Tupaia_belangeri
ENSCVAG00000014960	thumpd1	89	59.589	ENSTTRG00000016435	THUMPD1	77	59.790	Tursiops_truncatus
ENSCVAG00000014960	thumpd1	60	46.667	ENSUAMG00000005779	-	62	56.000	Ursus_americanus
ENSCVAG00000014960	thumpd1	85	60.142	ENSVPAG00000003422	THUMPD1	79	59.786	Vicugna_pacos
ENSCVAG00000014960	thumpd1	92	57.143	ENSVVUG00000023241	THUMPD1	75	59.567	Vulpes_vulpes
ENSCVAG00000014960	thumpd1	62	62.069	ENSXETG00000005539	thumpd1	98	51.228	Xenopus_tropicalis
ENSCVAG00000014960	thumpd1	51	85.976	ENSXCOG00000016003	thumpd1	75	89.583	Xiphophorus_couchianus
ENSCVAG00000014960	thumpd1	100	86.462	ENSXMAG00000026052	thumpd1	100	86.462	Xiphophorus_maculatus