EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCVAG00000015067 (Gene tree)
Gene ID
107084701
Gene Symbol
CPSF3
Alias
si:dkey-81b15.1|wu:fc32f10|zgc:101655
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Cyprinodon_variegatus
Status
putative
Strand
Plus strand
Length
17566 bases
Position
chrKL652607.1:1217406-1234971
Accession
107084701
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCVAP00000012601CPSF73-100_CPF11718.81.2e-5411
ENSCVAP00000012601Beta-CaspPF10996.87.9e-3411
ENSCVAP00000012601Lactamase_BPF00753.279.5e-1911
ENSCVAP00000012601RMMBLPF07521.122.1e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCVAT00000019913CPSF3-2012073XM_015374642ENSCVAP00000012601690 (aa)XP_015230128UPI0007425C6C
Gene Model
Click here to download ENSCVAG00000015067's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000015067's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCVAG00000015067CPSF36937.219ENSCVAG00000008788ints118037.219
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCVAG00000015067CPSF39888.235ENSG00000119203CPSF310099.265Homo_sapiens
ENSCVAG00000015067CPSF37597.674ENSAPOG00000012241CPSF39297.674Acanthochromis_polyacanthus
ENSCVAG00000015067CPSF39988.372ENSAPOG00000022087cpsf39988.372Acanthochromis_polyacanthus
ENSCVAG00000015067CPSF39888.529ENSAMEG00000008493CPSF39988.529Ailuropoda_melanoleuca
ENSCVAG00000015067CPSF39193.502ENSACIG00000023663CPSF310086.831Amphilophus_citrinellus
ENSCVAG00000015067CPSF39184.713ENSACIG00000009846cpsf39978.810Amphilophus_citrinellus
ENSCVAG00000015067CPSF310096.377ENSAOCG00000010077CPSF310096.377Amphiprion_ocellaris
ENSCVAG00000015067CPSF39988.227ENSAOCG00000022056cpsf39791.612Amphiprion_ocellaris
ENSCVAG00000015067CPSF310096.377ENSAPEG00000021167CPSF310096.377Amphiprion_percula
ENSCVAG00000015067CPSF39988.372ENSAPEG00000019526cpsf39989.041Amphiprion_percula
ENSCVAG00000015067CPSF39987.936ENSATEG00000003959cpsf39987.936Anabas_testudineus
ENSCVAG00000015067CPSF310088.406ENSATEG00000014525CPSF310088.406Anabas_testudineus
ENSCVAG00000015067CPSF39787.481ENSAPLG00000006941CPSF39887.481Anas_platyrhynchos
ENSCVAG00000015067CPSF39284.796ENSACAG00000001759CPSF39984.796Anolis_carolinensis
ENSCVAG00000015067CPSF39882.500ENSANAG00000031254CPSF39982.909Aotus_nancymaae
ENSCVAG00000015067CPSF39894.295ENSACLG00000018846CPSF310087.554Astatotilapia_calliptera
ENSCVAG00000015067CPSF39688.253ENSACLG00000014484cpsf39988.253Astatotilapia_calliptera
ENSCVAG00000015067CPSF310089.710ENSAMXG00000004786cpsf310089.710Astyanax_mexicanus
ENSCVAG00000015067CPSF39888.529ENSBTAG00000019735CPSF39988.529Bos_taurus
ENSCVAG00000015067CPSF39057.729WBGene00013460cpsf-38957.729Caenorhabditis_elegans
ENSCVAG00000015067CPSF39888.088ENSCJAG00000006276CPSF39988.088Callithrix_jacchus
ENSCVAG00000015067CPSF39888.529ENSCAFG00000003375CPSF39588.529Canis_familiaris
ENSCVAG00000015067CPSF38990.747ENSCAFG00020026799CPSF39990.747Canis_lupus_dingo
ENSCVAG00000015067CPSF39888.529ENSCHIG00000013973CPSF39988.529Capra_hircus
ENSCVAG00000015067CPSF39888.235ENSTSYG00000002967CPSF39988.235Carlito_syrichta
ENSCVAG00000015067CPSF39688.288ENSCAPG00000013851CPSF39988.288Cavia_aperea
ENSCVAG00000015067CPSF39888.382ENSCPOG00000011299CPSF39988.382Cavia_porcellus
ENSCVAG00000015067CPSF39888.088ENSCCAG00000036730CPSF39988.088Cebus_capucinus
ENSCVAG00000015067CPSF39886.471ENSCATG00000014770CPSF39993.253Cercocebus_atys
ENSCVAG00000015067CPSF39888.235ENSCLAG00000002727CPSF39988.235Chinchilla_lanigera
ENSCVAG00000015067CPSF39880.294ENSCSAG00000007125CPSF39980.294Chlorocebus_sabaeus
ENSCVAG00000015067CPSF385100.000ENSCHOG00000000180CPSF38563.093Choloepus_hoffmanni
ENSCVAG00000015067CPSF39987.536ENSCPBG00000014074CPSF39987.536Chrysemys_picta_bellii
ENSCVAG00000015067CPSF39868.175ENSCING00000007214-9868.175Ciona_intestinalis
ENSCVAG00000015067CPSF39878.394ENSCANG00000034435CPSF39978.394Colobus_angolensis_palliatus
ENSCVAG00000015067CPSF39888.235ENSCGRG00001013134Cpsf39988.235Cricetulus_griseus_chok1gshd
ENSCVAG00000015067CPSF39888.235ENSCGRG00000018319Cpsf39988.235Cricetulus_griseus_crigri
ENSCVAG00000015067CPSF310092.475ENSCSEG00000002021CPSF310092.736Cynoglossus_semilaevis
ENSCVAG00000015067CPSF310089.710ENSDARG00000027649cpsf310089.710Danio_rerio
ENSCVAG00000015067CPSF39887.518ENSDNOG00000008940CPSF39587.518Dasypus_novemcinctus
ENSCVAG00000015067CPSF39488.735ENSDORG00000014263Cpsf39988.735Dipodomys_ordii
ENSCVAG00000015067CPSF39965.839FBgn0261065Cpsf739965.839Drosophila_melanogaster
ENSCVAG00000015067CPSF39477.006ENSETEG00000003893CPSF39977.006Echinops_telfairi
ENSCVAG00000015067CPSF39976.197ENSEBUG00000009018cpsf39976.479Eptatretus_burgeri
ENSCVAG00000015067CPSF39888.529ENSEASG00005003970CPSF39988.529Equus_asinus_asinus
ENSCVAG00000015067CPSF39888.529ENSECAG00000019911CPSF39692.905Equus_caballus
ENSCVAG00000015067CPSF39873.088ENSEEUG00000015422CPSF39973.088Erinaceus_europaeus
ENSCVAG00000015067CPSF39990.988ENSELUG00000013775cpsf39990.988Esox_lucius
ENSCVAG00000015067CPSF39888.529ENSFCAG00000007852CPSF39988.529Felis_catus
ENSCVAG00000015067CPSF39387.616ENSFALG00000006572CPSF39987.616Ficedula_albicollis
ENSCVAG00000015067CPSF39887.629ENSFDAG00000006317CPSF39987.629Fukomys_damarensis
ENSCVAG00000015067CPSF35981.463ENSFHEG00000012186CPSF310081.463Fundulus_heteroclitus
ENSCVAG00000015067CPSF39986.628ENSFHEG00000014774cpsf39986.628Fundulus_heteroclitus
ENSCVAG00000015067CPSF310088.406ENSGMOG00000003157cpsf310088.406Gadus_morhua
ENSCVAG00000015067CPSF39986.919ENSGALG00000016424CPSF39986.919Gallus_gallus
ENSCVAG00000015067CPSF39184.579ENSGAFG00000019449cpsf310078.551Gambusia_affinis
ENSCVAG00000015067CPSF310096.667ENSGAFG00000008016CPSF310096.667Gambusia_affinis
ENSCVAG00000015067CPSF36883.726ENSGAGG00000025583CPSF39383.726Gopherus_agassizii
ENSCVAG00000015067CPSF39886.043ENSGGOG00000001757CPSF39197.849Gorilla_gorilla
ENSCVAG00000015067CPSF35989.630ENSHBUG00000014332CPSF310089.630Haplochromis_burtoni
ENSCVAG00000015067CPSF39988.081ENSHBUG00000001188cpsf39988.081Haplochromis_burtoni
ENSCVAG00000015067CPSF39888.071ENSHGLG00000000666CPSF39888.071Heterocephalus_glaber_female
ENSCVAG00000015067CPSF39888.071ENSHGLG00100007765CPSF39888.071Heterocephalus_glaber_male
ENSCVAG00000015067CPSF39986.938ENSHCOG00000007251cpsf39986.938Hippocampus_comes
ENSCVAG00000015067CPSF39993.324ENSHCOG00000015957CPSF39993.324Hippocampus_comes
ENSCVAG00000015067CPSF310088.696ENSIPUG00000023488cpsf310088.696Ictalurus_punctatus
ENSCVAG00000015067CPSF39888.382ENSSTOG00000004476CPSF39988.382Ictidomys_tridecemlineatus
ENSCVAG00000015067CPSF39887.647ENSJJAG00000023415Cpsf39987.647Jaculus_jaculus
ENSCVAG00000015067CPSF39986.483ENSKMAG00000002806cpsf39986.483Kryptolebias_marmoratus
ENSCVAG00000015067CPSF310096.377ENSKMAG00000007317CPSF310096.377Kryptolebias_marmoratus
ENSCVAG00000015067CPSF39596.651ENSLBEG00000013492CPSF39996.651Labrus_bergylta
ENSCVAG00000015067CPSF35481.720ENSLBEG00000015018-9981.720Labrus_bergylta
ENSCVAG00000015067CPSF39981.250ENSLBEG00000020569cpsf39681.250Labrus_bergylta
ENSCVAG00000015067CPSF310080.753ENSLACG00000008308CPSF310080.753Latimeria_chalumnae
ENSCVAG00000015067CPSF310089.899ENSLOCG00000016823cpsf310089.899Lepisosteus_oculatus
ENSCVAG00000015067CPSF39887.334ENSLAFG00000009467CPSF39987.334Loxodonta_africana
ENSCVAG00000015067CPSF39888.088ENSMFAG00000001339CPSF39495.000Macaca_fascicularis
ENSCVAG00000015067CPSF39387.616ENSMMUG00000018038CPSF39295.000Macaca_mulatta
ENSCVAG00000015067CPSF39097.200ENSMNEG00000039447CPSF39997.200Macaca_nemestrina
ENSCVAG00000015067CPSF39888.235ENSMLEG00000026825CPSF39297.639Mandrillus_leucophaeus
ENSCVAG00000015067CPSF39987.500ENSMAMG00000003076cpsf39987.500Mastacembelus_armatus
ENSCVAG00000015067CPSF39193.513ENSMAMG00000008835CPSF310086.994Mastacembelus_armatus
ENSCVAG00000015067CPSF310095.797ENSMZEG00005006258CPSF310095.797Maylandia_zebra
ENSCVAG00000015067CPSF39988.081ENSMZEG00005014358cpsf39988.081Maylandia_zebra
ENSCVAG00000015067CPSF39687.387ENSMGAG00000013995CPSF39987.387Meleagris_gallopavo
ENSCVAG00000015067CPSF35479.733ENSMAUG00000000166Cpsf39979.733Mesocricetus_auratus
ENSCVAG00000015067CPSF39883.358ENSMICG00000002363CPSF39983.358Microcebus_murinus
ENSCVAG00000015067CPSF39885.000ENSMOCG00000020067Cpsf39985.000Microtus_ochrogaster
ENSCVAG00000015067CPSF38072.321ENSMMOG00000011923CPSF38578.214Mola_mola
ENSCVAG00000015067CPSF39382.764ENSMMOG00000018212CPSF39882.764Mola_mola
ENSCVAG00000015067CPSF39887.336ENSMODG00000014703CPSF39987.336Monodelphis_domestica
ENSCVAG00000015067CPSF39290.640ENSMALG00000011474CPSF310090.640Monopterus_albus
ENSCVAG00000015067CPSF39988.517ENSMALG00000016416cpsf39988.517Monopterus_albus
ENSCVAG00000015067CPSF39887.941MGP_CAROLIEiJ_G0017640Cpsf39987.941Mus_caroli
ENSCVAG00000015067CPSF39887.941ENSMUSG00000054309Cpsf39697.458Mus_musculus
ENSCVAG00000015067CPSF39887.794MGP_PahariEiJ_G0029397Cpsf39987.794Mus_pahari
ENSCVAG00000015067CPSF39887.941MGP_SPRETEiJ_G0018481Cpsf39987.941Mus_spretus
ENSCVAG00000015067CPSF39888.513ENSMPUG00000013213CPSF39988.513Mustela_putorius_furo
ENSCVAG00000015067CPSF39888.399ENSMLUG00000010636CPSF39988.399Myotis_lucifugus
ENSCVAG00000015067CPSF39888.088ENSNGAG00000019836Cpsf39988.088Nannospalax_galili
ENSCVAG00000015067CPSF39987.645ENSNBRG00000004770cpsf39987.645Neolamprologus_brichardi
ENSCVAG00000015067CPSF39894.295ENSNBRG00000010525CPSF310087.554Neolamprologus_brichardi
ENSCVAG00000015067CPSF39888.088ENSNLEG00000013359CPSF39197.849Nomascus_leucogenys
ENSCVAG00000015067CPSF39857.794ENSMEUG00000013117-9957.794Notamacropus_eugenii
ENSCVAG00000015067CPSF39879.676ENSOPRG00000008902CPSF39979.676Ochotona_princeps
ENSCVAG00000015067CPSF39888.235ENSODEG00000003129CPSF39988.235Octodon_degus
ENSCVAG00000015067CPSF39988.372ENSONIG00000018812cpsf39988.372Oreochromis_niloticus
ENSCVAG00000015067CPSF38186.501ENSOANG00000008577CPSF39986.501Ornithorhynchus_anatinus
ENSCVAG00000015067CPSF39888.382ENSOCUG00000003728CPSF39988.382Oryctolagus_cuniculus
ENSCVAG00000015067CPSF39987.209ENSORLG00000018854cpsf39987.209Oryzias_latipes
ENSCVAG00000015067CPSF39987.064ENSORLG00020013331cpsf39987.064Oryzias_latipes_hni
ENSCVAG00000015067CPSF39987.209ENSORLG00015011017cpsf39987.209Oryzias_latipes_hsok
ENSCVAG00000015067CPSF39987.355ENSOMEG00000010647cpsf39587.355Oryzias_melastigma
ENSCVAG00000015067CPSF39878.088ENSOGAG00000001680CPSF39978.088Otolemur_garnettii
ENSCVAG00000015067CPSF39888.529ENSOARG00000015073CPSF39988.529Ovis_aries
ENSCVAG00000015067CPSF39888.235ENSPPAG00000042457CPSF39197.849Pan_paniscus
ENSCVAG00000015067CPSF39888.529ENSPPRG00000016790CPSF39988.529Panthera_pardus
ENSCVAG00000015067CPSF39888.660ENSPTIG00000003920CPSF39988.660Panthera_tigris_altaica
ENSCVAG00000015067CPSF39888.235ENSPTRG00000011638CPSF39197.849Pan_troglodytes
ENSCVAG00000015067CPSF39888.088ENSPANG00000016798CPSF39495.000Papio_anubis
ENSCVAG00000015067CPSF310091.159ENSPKIG00000023646cpsf310091.159Paramormyrops_kingsleyae
ENSCVAG00000015067CPSF39887.078ENSPSIG00000016144CPSF39987.078Pelodiscus_sinensis
ENSCVAG00000015067CPSF38288.360ENSPMGG00000006141-9981.369Periophthalmus_magnuspinnatus
ENSCVAG00000015067CPSF35989.877ENSPMGG00000015311CPSF310089.877Periophthalmus_magnuspinnatus
ENSCVAG00000015067CPSF39888.676ENSPEMG00000017668Cpsf39988.676Peromyscus_maniculatus_bairdii
ENSCVAG00000015067CPSF37989.725ENSPMAG00000004841cpsf310089.725Petromyzon_marinus
ENSCVAG00000015067CPSF39688.438ENSPCIG00000009823CPSF39888.804Phascolarctos_cinereus
ENSCVAG00000015067CPSF310086.377ENSPFOG00000015922cpsf310086.377Poecilia_formosa
ENSCVAG00000015067CPSF310096.522ENSPFOG00000010418-10096.522Poecilia_formosa
ENSCVAG00000015067CPSF35995.556ENSPLAG00000021300-10095.556Poecilia_latipinna
ENSCVAG00000015067CPSF310086.377ENSPLAG00000000882cpsf310086.377Poecilia_latipinna
ENSCVAG00000015067CPSF310086.522ENSPMEG00000018309cpsf310086.522Poecilia_mexicana
ENSCVAG00000015067CPSF39184.579ENSPREG00000014875cpsf310078.551Poecilia_reticulata
ENSCVAG00000015067CPSF310088.551ENSPREG00000004482CPSF310088.551Poecilia_reticulata
ENSCVAG00000015067CPSF39884.118ENSPPYG00000012666CPSF39984.118Pongo_abelii
ENSCVAG00000015067CPSF38465.913ENSPCAG00000015042CPSF38965.913Procavia_capensis
ENSCVAG00000015067CPSF38689.606ENSPCOG00000023016CPSF39789.606Propithecus_coquereli
ENSCVAG00000015067CPSF39888.365ENSPVAG00000005324CPSF39988.365Pteropus_vampyrus
ENSCVAG00000015067CPSF39988.081ENSPNYG00000004405cpsf39988.081Pundamilia_nyererei
ENSCVAG00000015067CPSF38596.125ENSPNYG00000021047CPSF39188.206Pundamilia_nyererei
ENSCVAG00000015067CPSF310088.841ENSPNAG00000023060cpsf310088.841Pygocentrus_nattereri
ENSCVAG00000015067CPSF39987.665ENSRNOG00000052418Cpsf39987.665Rattus_norvegicus
ENSCVAG00000015067CPSF39883.235ENSRBIG00000041615CPSF39984.211Rhinopithecus_bieti
ENSCVAG00000015067CPSF39888.235ENSRROG00000033792CPSF39988.235Rhinopithecus_roxellana
ENSCVAG00000015067CPSF38443.636YLR277CYSH18543.636Saccharomyces_cerevisiae
ENSCVAG00000015067CPSF39684.627ENSSBOG00000027263CPSF39784.627Saimiri_boliviensis_boliviensis
ENSCVAG00000015067CPSF39888.382ENSSHAG00000007024CPSF39988.382Sarcophilus_harrisii
ENSCVAG00000015067CPSF310090.580ENSSFOG00015002108cpsf310090.580Scleropages_formosus
ENSCVAG00000015067CPSF39593.607ENSSMAG00000020534CPSF39793.607Scophthalmus_maximus
ENSCVAG00000015067CPSF310095.942ENSSDUG00000018498CPSF310095.942Seriola_dumerili
ENSCVAG00000015067CPSF39987.936ENSSDUG00000002828cpsf39787.936Seriola_dumerili
ENSCVAG00000015067CPSF39988.081ENSSLDG00000008469cpsf39987.403Seriola_lalandi_dorsalis
ENSCVAG00000015067CPSF310095.942ENSSLDG00000005234CPSF310095.942Seriola_lalandi_dorsalis
ENSCVAG00000015067CPSF38983.992ENSSARG00000005186CPSF39083.992Sorex_araneus
ENSCVAG00000015067CPSF39685.821ENSSPUG00000015525CPSF39785.821Sphenodon_punctatus
ENSCVAG00000015067CPSF310096.232ENSSPAG00000002906CPSF310096.232Stegastes_partitus
ENSCVAG00000015067CPSF39988.372ENSSPAG00000018579cpsf39988.372Stegastes_partitus
ENSCVAG00000015067CPSF39888.529ENSSSCG00000020799CPSF39988.529Sus_scrofa
ENSCVAG00000015067CPSF39987.812ENSTGUG00000013016CPSF39987.812Taeniopygia_guttata
ENSCVAG00000015067CPSF35978.325ENSTRUG00000013905CPSF310078.325Takifugu_rubripes
ENSCVAG00000015067CPSF39986.919ENSTRUG00000007030cpsf39886.919Takifugu_rubripes
ENSCVAG00000015067CPSF38491.713ENSTBEG00000002707CPSF38491.713Tupaia_belangeri
ENSCVAG00000015067CPSF38674.939ENSTTRG00000000861CPSF38774.939Tursiops_truncatus
ENSCVAG00000015067CPSF39589.160ENSUAMG00000007535CPSF39489.160Ursus_americanus
ENSCVAG00000015067CPSF39388.080ENSUMAG00000003676CPSF39988.080Ursus_maritimus
ENSCVAG00000015067CPSF39287.855ENSVPAG00000008041CPSF310087.855Vicugna_pacos
ENSCVAG00000015067CPSF39888.529ENSVVUG00000002194CPSF39988.529Vulpes_vulpes
ENSCVAG00000015067CPSF39985.776ENSXETG00000008263cpsf39985.776Xenopus_tropicalis
ENSCVAG00000015067CPSF35494.355ENSXCOG00000000957-8794.355Xiphophorus_couchianus
ENSCVAG00000015067CPSF310086.667ENSXCOG00000019695cpsf310086.667Xiphophorus_couchianus
ENSCVAG00000015067CPSF310096.522ENSXMAG00000027291CPSF310096.522Xiphophorus_maculatus
ENSCVAG00000015067CPSF310086.522ENSXMAG00000009784cpsf310086.522Xiphophorus_maculatus

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