EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000015081 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 8880 bases
Position: chrKL653735.1:20611-29490
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000012689	zf-C2H2	PF00096.26	5.5e-18	1	2
ENSCVAP00000012689	zf-C2H2	PF00096.26	5.5e-18	2	2
ENSCVAP00000012689	zf-met	PF12874.7	0.00018	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000030420	-	1961	-	ENSCVAP00000012689	408 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000015081's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000015081's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000015081	-	61	40.594	ENSCVAG00000014322	-	73	41.667
ENSCVAG00000015081	-	53	45.745	ENSCVAG00000012543	-	99	45.745

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000015081	-	79	46.535	ENSEBUG00000006080	-	86	46.739	Eptatretus_burgeri
ENSCVAG00000015081	-	96	74.752	ENSFHEG00000003423	-	81	74.627	Fundulus_heteroclitus
ENSCVAG00000015081	-	50	39.604	ENSONIG00000016734	-	51	44.565	Oreochromis_niloticus
ENSCVAG00000015081	-	61	42.857	ENSPMGG00000018639	-	98	44.565	Periophthalmus_magnuspinnatus
ENSCVAG00000015081	-	96	72.292	ENSPLAG00000016258	-	81	75.315	Poecilia_latipinna
ENSCVAG00000015081	-	96	72.292	ENSPLAG00000009442	-	81	75.315	Poecilia_latipinna
ENSCVAG00000015081	-	96	72.544	ENSPMEG00000017750	-	81	75.567	Poecilia_mexicana
ENSCVAG00000015081	-	63	39.474	ENSSLDG00000002756	-	77	46.535	Seriola_lalandi_dorsalis