EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000015162 (Gene tree)
Gene ID: 107089212
Gene Symbol: sar1ab
Alias: fd13d02|sar1a|wu:fd13d02|zgc:110650
Full Name: GTP-binding protein SAR1b-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 8504 bases
Position: chrKL652501.1:1838297-1846800
Accession: 107089212
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000012707	MMR_HSR1	PF01926.23	4.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000020033	-	1785	XM_015381907	ENSCVAP00000012707	198 (aa)	XP_015237393	UPI000742C77B

Gene Model

Click here to download ENSCVAG00000015162's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000015162's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000015162	sar1ab	87	32.000	ENSCVAG00000011381	-	89	32.000
ENSCVAG00000015162	sar1ab	72	33.566	ENSCVAG00000018314	-	79	33.566
ENSCVAG00000015162	sar1ab	57	36.283	ENSCVAG00000013902	-	70	36.283
ENSCVAG00000015162	sar1ab	87	30.814	ENSCVAG00000009124	ARF5	89	32.639
ENSCVAG00000015162	sar1ab	69	33.333	ENSCVAG00000016249	ARL6	82	33.333
ENSCVAG00000015162	sar1ab	100	81.818	ENSCVAG00000022959	sar1b	100	81.818
ENSCVAG00000015162	sar1ab	73	33.333	ENSCVAG00000013760	-	69	33.333
ENSCVAG00000015162	sar1ab	65	32.031	ENSCVAG00000021960	arl3	67	32.031
ENSCVAG00000015162	sar1ab	73	34.483	ENSCVAG00000013374	-	79	34.483
ENSCVAG00000015162	sar1ab	100	78.283	ENSCVAG00000006500	-	100	78.283
ENSCVAG00000015162	sar1ab	64	35.115	ENSCVAG00000004305	arl4aa	66	35.115
ENSCVAG00000015162	sar1ab	71	32.857	ENSCVAG00000008445	arl2	76	32.857
ENSCVAG00000015162	sar1ab	92	30.055	ENSCVAG00000001731	arl1	93	30.055
ENSCVAG00000015162	sar1ab	94	30.159	ENSCVAG00000000745	arf2b	96	30.159
ENSCVAG00000015162	sar1ab	58	36.364	ENSCVAG00000023139	-	62	36.364
ENSCVAG00000015162	sar1ab	87	30.814	ENSCVAG00000007314	-	89	30.814
ENSCVAG00000015162	sar1ab	67	35.766	ENSCVAG00000020902	arl4cb	69	35.766
ENSCVAG00000015162	sar1ab	86	31.579	ENSCVAG00000016797	-	87	31.579
ENSCVAG00000015162	sar1ab	72	33.566	ENSCVAG00000021619	-	79	33.566
ENSCVAG00000015162	sar1ab	72	33.566	ENSCVAG00000001271	arf3b	78	33.566

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000015162	sar1ab	100	92.929	ENSACIG00000019827	sar1ab	100	92.929	Amphilophus_citrinellus
ENSCVAG00000015162	sar1ab	100	92.929	ENSAOCG00000022062	sar1ab	100	92.929	Amphiprion_ocellaris
ENSCVAG00000015162	sar1ab	100	92.929	ENSAPEG00000011525	sar1ab	100	92.929	Amphiprion_percula
ENSCVAG00000015162	sar1ab	100	91.414	ENSATEG00000003466	sar1ab	100	91.414	Anabas_testudineus
ENSCVAG00000015162	sar1ab	100	90.909	ENSACLG00000013053	sar1ab	100	90.909	Astatotilapia_calliptera
ENSCVAG00000015162	sar1ab	100	89.394	ENSCSEG00000004825	sar1ab	100	89.394	Cynoglossus_semilaevis
ENSCVAG00000015162	sar1ab	100	85.354	ENSDARG00000033320	sar1ab	100	85.354	Danio_rerio
ENSCVAG00000015162	sar1ab	100	88.384	ENSELUG00000024279	sar1ab	100	88.384	Esox_lucius
ENSCVAG00000015162	sar1ab	100	82.323	ENSELUG00000013652	sar1a	100	82.323	Esox_lucius
ENSCVAG00000015162	sar1ab	100	95.960	ENSFHEG00000021773	sar1ab	100	95.960	Fundulus_heteroclitus
ENSCVAG00000015162	sar1ab	100	79.798	ENSFHEG00000012352	-	100	79.798	Fundulus_heteroclitus
ENSCVAG00000015162	sar1ab	100	88.384	ENSGMOG00000012588	sar1ab	100	88.384	Gadus_morhua
ENSCVAG00000015162	sar1ab	100	79.798	ENSGAFG00000004846	-	100	79.798	Gambusia_affinis
ENSCVAG00000015162	sar1ab	100	94.949	ENSGAFG00000009702	sar1ab	100	94.949	Gambusia_affinis
ENSCVAG00000015162	sar1ab	100	90.404	ENSGACG00000008616	sar1ab	100	90.404	Gasterosteus_aculeatus
ENSCVAG00000015162	sar1ab	100	90.909	ENSHBUG00000021221	sar1ab	100	90.909	Haplochromis_burtoni
ENSCVAG00000015162	sar1ab	100	87.879	ENSHCOG00000002845	sar1ab	80	87.879	Hippocampus_comes
ENSCVAG00000015162	sar1ab	100	95.455	ENSKMAG00000018006	sar1ab	100	95.455	Kryptolebias_marmoratus
ENSCVAG00000015162	sar1ab	100	90.909	ENSLBEG00000001114	sar1ab	100	90.909	Labrus_bergylta
ENSCVAG00000015162	sar1ab	100	91.414	ENSMAMG00000021314	sar1ab	100	91.414	Mastacembelus_armatus
ENSCVAG00000015162	sar1ab	100	90.909	ENSMZEG00005027606	sar1ab	100	90.909	Maylandia_zebra
ENSCVAG00000015162	sar1ab	100	91.919	ENSMMOG00000010360	sar1ab	100	91.919	Mola_mola
ENSCVAG00000015162	sar1ab	100	90.909	ENSMALG00000005831	sar1ab	100	90.909	Monopterus_albus
ENSCVAG00000015162	sar1ab	100	91.414	ENSNBRG00000018772	sar1ab	100	91.414	Neolamprologus_brichardi
ENSCVAG00000015162	sar1ab	100	91.919	ENSONIG00000018509	sar1ab	100	91.919	Oreochromis_niloticus
ENSCVAG00000015162	sar1ab	100	90.909	ENSORLG00000006779	sar1ab	67	90.909	Oryzias_latipes
ENSCVAG00000015162	sar1ab	100	80.808	ENSORLG00000009132	-	90	80.808	Oryzias_latipes
ENSCVAG00000015162	sar1ab	100	80.808	ENSORLG00020007024	-	90	80.808	Oryzias_latipes_hni
ENSCVAG00000015162	sar1ab	100	90.404	ENSORLG00020005458	sar1ab	100	90.404	Oryzias_latipes_hni
ENSCVAG00000015162	sar1ab	100	90.909	ENSORLG00015010542	sar1ab	100	90.909	Oryzias_latipes_hsok
ENSCVAG00000015162	sar1ab	100	80.303	ENSORLG00015006223	-	94	83.929	Oryzias_latipes_hsok
ENSCVAG00000015162	sar1ab	100	80.303	ENSOMEG00000012020	-	100	80.303	Oryzias_melastigma
ENSCVAG00000015162	sar1ab	100	92.424	ENSOMEG00000004948	sar1ab	100	92.424	Oryzias_melastigma
ENSCVAG00000015162	sar1ab	100	82.323	ENSPKIG00000007615	sar1ab	100	82.323	Paramormyrops_kingsleyae
ENSCVAG00000015162	sar1ab	100	90.909	ENSPMGG00000013330	sar1ab	100	90.909	Periophthalmus_magnuspinnatus
ENSCVAG00000015162	sar1ab	100	96.970	ENSPFOG00000023432	sar1ab	100	96.970	Poecilia_formosa
ENSCVAG00000015162	sar1ab	100	96.465	ENSPLAG00000023705	sar1ab	100	96.465	Poecilia_latipinna
ENSCVAG00000015162	sar1ab	100	79.293	ENSPMEG00000001717	-	100	79.293	Poecilia_mexicana
ENSCVAG00000015162	sar1ab	100	96.970	ENSPMEG00000000559	sar1ab	100	96.970	Poecilia_mexicana
ENSCVAG00000015162	sar1ab	100	96.970	ENSPREG00000016098	sar1ab	100	96.970	Poecilia_reticulata
ENSCVAG00000015162	sar1ab	100	91.414	ENSPNYG00000011603	sar1ab	100	91.414	Pundamilia_nyererei
ENSCVAG00000015162	sar1ab	100	85.859	ENSPNAG00000008007	sar1ab	100	85.859	Pygocentrus_nattereri
ENSCVAG00000015162	sar1ab	100	84.848	ENSSFOG00015014010	sar1a	100	84.848	Scleropages_formosus
ENSCVAG00000015162	sar1ab	58	88.696	ENSSMAG00000020758	sar1ab	83	88.696	Scophthalmus_maximus
ENSCVAG00000015162	sar1ab	100	91.919	ENSSDUG00000010773	sar1ab	100	91.919	Seriola_dumerili
ENSCVAG00000015162	sar1ab	100	91.919	ENSSLDG00000025558	sar1ab	100	91.919	Seriola_lalandi_dorsalis
ENSCVAG00000015162	sar1ab	100	93.434	ENSSPAG00000009194	sar1ab	100	93.434	Stegastes_partitus
ENSCVAG00000015162	sar1ab	100	90.404	ENSTRUG00000007269	sar1ab	100	90.404	Takifugu_rubripes
ENSCVAG00000015162	sar1ab	100	88.889	ENSTNIG00000008635	sar1ab	100	88.889	Tetraodon_nigroviridis
ENSCVAG00000015162	sar1ab	100	95.455	ENSXMAG00000003130	sar1ab	100	95.455	Xiphophorus_maculatus
ENSCVAG00000015162	sar1ab	100	80.303	ENSXMAG00000026223	SAR1A	100	80.303	Xiphophorus_maculatus