EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000015172 (Gene tree)
Gene ID: 107087428
Gene Symbol: crnkl1
Alias: zgc:55327
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 11962 bases
Position: chrKL652683.1:1157513-1169474
Accession: 107087428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000028240	Suf	PF05843.14	2.6e-13	1	1
ENSCVAP00000028240	HAT	PF02184.16	6.6e-37	1	2
ENSCVAP00000028240	HAT	PF02184.16	6.6e-37	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000020030	-	3580	XM_015378994	ENSCVAP00000028240	743 (aa)	XP_015234480	UPI000742A8D0

Gene Model

Click here to download ENSCVAG00000015172's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000015172's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000015172	crnkl1	92	84.964	ENSG00000101343	CRNKL1	97	86.787	Homo_sapiens
ENSCVAG00000015172	crnkl1	96	90.846	ENSAPOG00000009705	crnkl1	96	94.453	Acanthochromis_polyacanthus
ENSCVAG00000015172	crnkl1	92	85.588	ENSAMEG00000000270	CRNKL1	80	87.688	Ailuropoda_melanoleuca
ENSCVAG00000015172	crnkl1	96	89.341	ENSACIG00000015267	crnkl1	89	94.003	Amphilophus_citrinellus
ENSCVAG00000015172	crnkl1	96	90.985	ENSAOCG00000021964	crnkl1	88	95.802	Amphiprion_ocellaris
ENSCVAG00000015172	crnkl1	100	87.815	ENSAPEG00000015041	crnkl1	89	95.652	Amphiprion_percula
ENSCVAG00000015172	crnkl1	96	88.655	ENSATEG00000001068	crnkl1	88	92.975	Anabas_testudineus
ENSCVAG00000015172	crnkl1	89	85.909	ENSAPLG00000013105	CRNKL1	97	85.157	Anas_platyrhynchos
ENSCVAG00000015172	crnkl1	92	85.985	ENSACAG00000005284	CRNKL1	97	87.556	Anolis_carolinensis
ENSCVAG00000015172	crnkl1	85	86.508	ENSANAG00000024889	CRNKL1	99	86.508	Aotus_nancymaae
ENSCVAG00000015172	crnkl1	96	90.000	ENSACLG00000010813	crnkl1	89	95.060	Astatotilapia_calliptera
ENSCVAG00000015172	crnkl1	90	91.579	ENSAMXG00000018334	crnkl1	90	91.604	Astyanax_mexicanus
ENSCVAG00000015172	crnkl1	93	85.072	ENSBTAG00000008472	CRNKL1	96	87.688	Bos_taurus
ENSCVAG00000015172	crnkl1	86	64.075	WBGene00019762	M03F8.3	88	64.297	Caenorhabditis_elegans
ENSCVAG00000015172	crnkl1	92	85.109	ENSCJAG00000005393	CRNKL1	97	86.937	Callithrix_jacchus
ENSCVAG00000015172	crnkl1	90	86.567	ENSCAFG00000005333	CRNKL1	91	87.688	Canis_familiaris
ENSCVAG00000015172	crnkl1	92	85.547	ENSCAFG00020027488	CRNKL1	97	87.688	Canis_lupus_dingo
ENSCVAG00000015172	crnkl1	93	84.348	ENSCHIG00000013171	CRNKL1	96	86.787	Capra_hircus
ENSCVAG00000015172	crnkl1	92	84.964	ENSTSYG00000004197	CRNKL1	97	86.787	Carlito_syrichta
ENSCVAG00000015172	crnkl1	86	83.736	ENSCAPG00000010501	CRNKL1	96	85.977	Cavia_aperea
ENSCVAG00000015172	crnkl1	92	84.818	ENSCPOG00000004418	CRNKL1	97	86.787	Cavia_porcellus
ENSCVAG00000015172	crnkl1	92	84.964	ENSCCAG00000027037	CRNKL1	97	86.787	Cebus_capucinus
ENSCVAG00000015172	crnkl1	92	84.818	ENSCATG00000034247	CRNKL1	97	86.637	Cercocebus_atys
ENSCVAG00000015172	crnkl1	92	85.401	ENSCLAG00000013859	CRNKL1	97	87.387	Chinchilla_lanigera
ENSCVAG00000015172	crnkl1	92	84.818	ENSCSAG00000011434	CRNKL1	97	86.637	Chlorocebus_sabaeus
ENSCVAG00000015172	crnkl1	92	84.853	ENSCHOG00000006371	CRNKL1	81	86.937	Choloepus_hoffmanni
ENSCVAG00000015172	crnkl1	92	86.152	ENSCPBG00000023501	CRNKL1	97	88.156	Chrysemys_picta_bellii
ENSCVAG00000015172	crnkl1	89	68.825	ENSCING00000002709	-	97	68.825	Ciona_intestinalis
ENSCVAG00000015172	crnkl1	92	84.818	ENSCANG00000038789	CRNKL1	97	86.637	Colobus_angolensis_palliatus
ENSCVAG00000015172	crnkl1	92	85.007	ENSCGRG00001000687	-	97	86.937	Cricetulus_griseus_chok1gshd
ENSCVAG00000015172	crnkl1	92	85.007	ENSCGRG00001001115	-	97	86.937	Cricetulus_griseus_chok1gshd
ENSCVAG00000015172	crnkl1	92	85.007	ENSCGRG00000007854	Crnkl1	97	86.937	Cricetulus_griseus_crigri
ENSCVAG00000015172	crnkl1	90	93.601	ENSCSEG00000005594	crnkl1	98	94.012	Cynoglossus_semilaevis
ENSCVAG00000015172	crnkl1	95	86.275	ENSDARG00000007901	crnkl1	89	91.154	Danio_rerio
ENSCVAG00000015172	crnkl1	91	86.370	ENSDNOG00000016226	CRNKL1	92	87.387	Dasypus_novemcinctus
ENSCVAG00000015172	crnkl1	92	83.357	ENSDORG00000000394	-	97	85.268	Dipodomys_ordii
ENSCVAG00000015172	crnkl1	90	80.120	ENSDORG00000023724	-	98	80.451	Dipodomys_ordii
ENSCVAG00000015172	crnkl1	90	79.434	ENSDORG00000030174	-	99	79.760	Dipodomys_ordii
ENSCVAG00000015172	crnkl1	89	69.520	FBgn0000377	crn	95	69.520	Drosophila_melanogaster
ENSCVAG00000015172	crnkl1	92	74.745	ENSETEG00000003711	CRNKL1	81	76.276	Echinops_telfairi
ENSCVAG00000015172	crnkl1	90	62.500	ENSEBUG00000013461	crnkl1	94	58.982	Eptatretus_burgeri
ENSCVAG00000015172	crnkl1	92	85.693	ENSEASG00005002072	CRNKL1	97	87.688	Equus_asinus_asinus
ENSCVAG00000015172	crnkl1	92	85.693	ENSECAG00000022215	CRNKL1	97	87.688	Equus_caballus
ENSCVAG00000015172	crnkl1	92	82.794	ENSEEUG00000000413	CRNKL1	90	84.835	Erinaceus_europaeus
ENSCVAG00000015172	crnkl1	90	89.505	ENSELUG00000015424	crnkl1	94	89.505	Esox_lucius
ENSCVAG00000015172	crnkl1	92	85.693	ENSFCAG00000000714	CRNKL1	97	87.688	Felis_catus
ENSCVAG00000015172	crnkl1	88	86.677	ENSFALG00000004611	CRNKL1	97	86.677	Ficedula_albicollis
ENSCVAG00000015172	crnkl1	92	85.401	ENSFDAG00000000604	CRNKL1	97	87.387	Fukomys_damarensis
ENSCVAG00000015172	crnkl1	100	89.193	ENSFHEG00000013163	crnkl1	87	97.605	Fundulus_heteroclitus
ENSCVAG00000015172	crnkl1	90	89.820	ENSGMOG00000007609	crnkl1	92	89.820	Gadus_morhua
ENSCVAG00000015172	crnkl1	92	85.714	ENSGALG00000008429	CRNKL1	97	87.706	Gallus_gallus
ENSCVAG00000015172	crnkl1	100	91.386	ENSGAFG00000014249	crnkl1	88	97.156	Gambusia_affinis
ENSCVAG00000015172	crnkl1	98	86.557	ENSGACG00000011852	crnkl1	89	92.066	Gasterosteus_aculeatus
ENSCVAG00000015172	crnkl1	88	84.451	ENSGAGG00000021233	CRNKL1	97	87.156	Gopherus_agassizii
ENSCVAG00000015172	crnkl1	92	84.964	ENSGGOG00000014176	CRNKL1	97	86.787	Gorilla_gorilla
ENSCVAG00000015172	crnkl1	97	90.069	ENSHBUG00000005246	crnkl1	88	95.210	Haplochromis_burtoni
ENSCVAG00000015172	crnkl1	92	85.401	ENSHGLG00000010856	CRNKL1	97	87.387	Heterocephalus_glaber_female
ENSCVAG00000015172	crnkl1	92	85.401	ENSHGLG00100011521	CRNKL1	97	87.387	Heterocephalus_glaber_male
ENSCVAG00000015172	crnkl1	90	89.955	ENSHCOG00000006420	crnkl1	96	89.955	Hippocampus_comes
ENSCVAG00000015172	crnkl1	89	77.526	ENSIPUG00000006836	-	97	77.594	Ictalurus_punctatus
ENSCVAG00000015172	crnkl1	85	70.755	ENSIPUG00000000315	-	99	71.811	Ictalurus_punctatus
ENSCVAG00000015172	crnkl1	87	89.985	ENSIPUG00000006751	crnkl1	90	90.015	Ictalurus_punctatus
ENSCVAG00000015172	crnkl1	92	85.401	ENSSTOG00000014747	CRNKL1	97	87.387	Ictidomys_tridecemlineatus
ENSCVAG00000015172	crnkl1	92	83.167	ENSJJAG00000016926	Crnkl1	97	85.044	Jaculus_jaculus
ENSCVAG00000015172	crnkl1	97	91.111	ENSKMAG00000003620	crnkl1	85	95.210	Kryptolebias_marmoratus
ENSCVAG00000015172	crnkl1	90	75.929	ENSLBEG00000003543	crnkl1	89	75.519	Labrus_bergylta
ENSCVAG00000015172	crnkl1	91	87.611	ENSLACG00000001129	CRNKL1	98	88.606	Latimeria_chalumnae
ENSCVAG00000015172	crnkl1	90	90.977	ENSLOCG00000016889	crnkl1	93	91.004	Lepisosteus_oculatus
ENSCVAG00000015172	crnkl1	92	84.694	ENSLAFG00000004512	CRNKL1	97	87.406	Loxodonta_africana
ENSCVAG00000015172	crnkl1	92	84.818	ENSMFAG00000039893	CRNKL1	97	86.637	Macaca_fascicularis
ENSCVAG00000015172	crnkl1	92	84.818	ENSMMUG00000007709	CRNKL1	97	86.637	Macaca_mulatta
ENSCVAG00000015172	crnkl1	92	84.818	ENSMNEG00000037490	CRNKL1	97	86.637	Macaca_nemestrina
ENSCVAG00000015172	crnkl1	92	84.818	ENSMLEG00000034885	CRNKL1	97	86.637	Mandrillus_leucophaeus
ENSCVAG00000015172	crnkl1	96	90.336	ENSMAMG00000008757	crnkl1	88	94.903	Mastacembelus_armatus
ENSCVAG00000015172	crnkl1	100	87.766	ENSMZEG00005022345	crnkl1	89	95.060	Maylandia_zebra
ENSCVAG00000015172	crnkl1	92	85.298	ENSMGAG00000003452	CRNKL1	92	87.275	Meleagris_gallopavo
ENSCVAG00000015172	crnkl1	92	85.007	ENSMAUG00000020764	Crnkl1	97	86.937	Mesocricetus_auratus
ENSCVAG00000015172	crnkl1	92	84.964	ENSMICG00000006048	CRNKL1	97	86.787	Microcebus_murinus
ENSCVAG00000015172	crnkl1	89	62.199	ENSMOCG00000004179	-	95	62.275	Microtus_ochrogaster
ENSCVAG00000015172	crnkl1	92	77.396	ENSMOCG00000000681	-	96	79.056	Microtus_ochrogaster
ENSCVAG00000015172	crnkl1	85	91.139	ENSMMOG00000017601	crnkl1	97	91.139	Mola_mola
ENSCVAG00000015172	crnkl1	92	79.185	ENSMODG00000010857	-	97	81.231	Monodelphis_domestica
ENSCVAG00000015172	crnkl1	92	82.709	ENSMODG00000005961	-	96	84.444	Monodelphis_domestica
ENSCVAG00000015172	crnkl1	99	62.432	ENSMALG00000011211	crnkl1	88	74.328	Monopterus_albus
ENSCVAG00000015172	crnkl1	92	85.444	MGP_CAROLIEiJ_G0024394	Crnkl1	97	87.237	Mus_caroli
ENSCVAG00000015172	crnkl1	92	85.298	ENSMUSG00000001767	Crnkl1	97	87.237	Mus_musculus
ENSCVAG00000015172	crnkl1	92	84.716	MGP_PahariEiJ_G0025838	Crnkl1	97	86.637	Mus_pahari
ENSCVAG00000015172	crnkl1	92	85.298	MGP_SPRETEiJ_G0025312	Crnkl1	97	87.237	Mus_spretus
ENSCVAG00000015172	crnkl1	92	85.693	ENSMPUG00000001226	CRNKL1	97	87.688	Mustela_putorius_furo
ENSCVAG00000015172	crnkl1	92	85.169	ENSMLUG00000016513	CRNKL1	86	87.256	Myotis_lucifugus
ENSCVAG00000015172	crnkl1	92	83.381	ENSNGAG00000023097	Crnkl1	97	85.272	Nannospalax_galili
ENSCVAG00000015172	crnkl1	96	90.139	ENSNBRG00000007867	crnkl1	88	95.210	Neolamprologus_brichardi
ENSCVAG00000015172	crnkl1	92	81.752	ENSNLEG00000009862	CRNKL1	97	83.483	Nomascus_leucogenys
ENSCVAG00000015172	crnkl1	91	80.678	ENSMEUG00000002361	-	97	81.559	Notamacropus_eugenii
ENSCVAG00000015172	crnkl1	90	85.373	ENSMEUG00000012167	-	97	87.250	Notamacropus_eugenii
ENSCVAG00000015172	crnkl1	79	59.533	ENSOPRG00000009242	-	61	59.533	Ochotona_princeps
ENSCVAG00000015172	crnkl1	92	84.964	ENSODEG00000012175	CRNKL1	97	86.937	Octodon_degus
ENSCVAG00000015172	crnkl1	96	90.291	ENSONIG00000018728	crnkl1	88	95.359	Oreochromis_niloticus
ENSCVAG00000015172	crnkl1	90	85.417	ENSOCUG00000015484	CRNKL1	80	87.126	Oryctolagus_cuniculus
ENSCVAG00000015172	crnkl1	96	87.744	ENSORLG00000017240	crnkl1	94	87.834	Oryzias_latipes
ENSCVAG00000015172	crnkl1	96	87.727	ENSORLG00020001742	crnkl1	89	92.054	Oryzias_latipes_hni
ENSCVAG00000015172	crnkl1	100	86.418	ENSORLG00015019564	crnkl1	89	92.204	Oryzias_latipes_hsok
ENSCVAG00000015172	crnkl1	96	88.547	ENSOMEG00000019895	crnkl1	89	92.954	Oryzias_melastigma
ENSCVAG00000015172	crnkl1	91	85.778	ENSOGAG00000011544	CRNKL1	97	86.637	Otolemur_garnettii
ENSCVAG00000015172	crnkl1	92	85.255	ENSOARG00000002150	CRNKL1	87	87.838	Ovis_aries
ENSCVAG00000015172	crnkl1	92	83.824	ENSPPAG00000027847	CRNKL1	81	85.736	Pan_paniscus
ENSCVAG00000015172	crnkl1	92	85.693	ENSPPRG00000001955	CRNKL1	97	87.688	Panthera_pardus
ENSCVAG00000015172	crnkl1	92	85.693	ENSPTIG00000007393	CRNKL1	97	87.688	Panthera_tigris_altaica
ENSCVAG00000015172	crnkl1	92	84.964	ENSPTRG00000030609	CRNKL1	97	86.787	Pan_troglodytes
ENSCVAG00000015172	crnkl1	92	84.818	ENSPANG00000017420	CRNKL1	97	86.637	Papio_anubis
ENSCVAG00000015172	crnkl1	89	86.036	ENSPKIG00000017093	crnkl1	87	85.970	Paramormyrops_kingsleyae
ENSCVAG00000015172	crnkl1	92	84.480	ENSPSIG00000012705	CRNKL1	97	86.446	Pelodiscus_sinensis
ENSCVAG00000015172	crnkl1	92	84.818	ENSPMGG00000006263	crnkl1	94	86.078	Periophthalmus_magnuspinnatus
ENSCVAG00000015172	crnkl1	92	85.298	ENSPEMG00000000073	-	96	87.237	Peromyscus_maniculatus_bairdii
ENSCVAG00000015172	crnkl1	91	83.407	ENSPMAG00000002250	crnkl1	97	83.982	Petromyzon_marinus
ENSCVAG00000015172	crnkl1	91	85.778	ENSPCIG00000025825	CRNKL1	93	86.637	Phascolarctos_cinereus
ENSCVAG00000015172	crnkl1	100	91.790	ENSPFOG00000005102	crnkl1	90	96.707	Poecilia_formosa
ENSCVAG00000015172	crnkl1	99	91.328	ENSPLAG00000007288	crnkl1	87	96.707	Poecilia_latipinna
ENSCVAG00000015172	crnkl1	99	91.463	ENSPMEG00000008865	crnkl1	91	96.856	Poecilia_mexicana
ENSCVAG00000015172	crnkl1	100	90.508	ENSPREG00000012615	crnkl1	90	96.407	Poecilia_reticulata
ENSCVAG00000015172	crnkl1	90	85.928	ENSPPYG00000010747	CRNKL1	79	86.637	Pongo_abelii
ENSCVAG00000015172	crnkl1	90	81.194	ENSPCAG00000003296	CRNKL1	83	82.282	Procavia_capensis
ENSCVAG00000015172	crnkl1	92	83.676	ENSPCOG00000017608	CRNKL1	81	85.586	Propithecus_coquereli
ENSCVAG00000015172	crnkl1	90	86.418	ENSPVAG00000006207	CRNKL1	81	87.538	Pteropus_vampyrus
ENSCVAG00000015172	crnkl1	96	89.861	ENSPNYG00000001977	crnkl1	88	94.910	Pundamilia_nyererei
ENSCVAG00000015172	crnkl1	95	87.553	ENSPNAG00000001507	crnkl1	96	87.743	Pygocentrus_nattereri
ENSCVAG00000015172	crnkl1	92	85.298	ENSRNOG00000010587	Crnkl1	97	87.237	Rattus_norvegicus
ENSCVAG00000015172	crnkl1	92	85.153	ENSRNOG00000040045	Crnkl1	97	87.087	Rattus_norvegicus
ENSCVAG00000015172	crnkl1	92	84.818	ENSRBIG00000031770	CRNKL1	97	86.637	Rhinopithecus_bieti
ENSCVAG00000015172	crnkl1	92	84.672	ENSRROG00000040450	CRNKL1	97	86.486	Rhinopithecus_roxellana
ENSCVAG00000015172	crnkl1	87	36.758	YLR117C	CLF1	99	36.758	Saccharomyces_cerevisiae
ENSCVAG00000015172	crnkl1	91	86.330	ENSSBOG00000029672	CRNKL1	97	86.937	Saimiri_boliviensis_boliviensis
ENSCVAG00000015172	crnkl1	89	69.091	ENSSHAG00000011199	CRNKL1	99	69.406	Sarcophilus_harrisii
ENSCVAG00000015172	crnkl1	89	90.045	ENSSFOG00015000946	crnkl1	87	89.955	Scleropages_formosus
ENSCVAG00000015172	crnkl1	96	88.583	ENSSMAG00000007933	crnkl1	87	93.274	Scophthalmus_maximus
ENSCVAG00000015172	crnkl1	95	83.639	ENSSDUG00000012625	crnkl1	92	83.613	Seriola_dumerili
ENSCVAG00000015172	crnkl1	97	89.945	ENSSLDG00000021413	crnkl1	92	90.884	Seriola_lalandi_dorsalis
ENSCVAG00000015172	crnkl1	92	84.818	ENSSARG00000006443	CRNKL1	80	86.787	Sorex_araneus
ENSCVAG00000015172	crnkl1	92	85.693	ENSSPUG00000005254	CRNKL1	97	87.706	Sphenodon_punctatus
ENSCVAG00000015172	crnkl1	96	90.569	ENSSPAG00000016150	crnkl1	86	95.502	Stegastes_partitus
ENSCVAG00000015172	crnkl1	93	85.362	ENSSSCG00000038587	CRNKL1	96	87.688	Sus_scrofa
ENSCVAG00000015172	crnkl1	90	86.976	ENSTGUG00000007645	CRNKL1	96	86.976	Taeniopygia_guttata
ENSCVAG00000015172	crnkl1	93	83.792	ENSTRUG00000015417	crnkl1	88	86.057	Takifugu_rubripes
ENSCVAG00000015172	crnkl1	90	89.671	ENSTNIG00000010710	crnkl1	97	89.671	Tetraodon_nigroviridis
ENSCVAG00000015172	crnkl1	84	85.120	ENSTBEG00000001304	CRNKL1	82	85.238	Tupaia_belangeri
ENSCVAG00000015172	crnkl1	84	82.720	ENSTTRG00000000484	CRNKL1	81	82.857	Tursiops_truncatus
ENSCVAG00000015172	crnkl1	92	85.693	ENSUAMG00000018586	CRNKL1	97	87.688	Ursus_americanus
ENSCVAG00000015172	crnkl1	92	85.693	ENSUMAG00000024957	CRNKL1	97	87.688	Ursus_maritimus
ENSCVAG00000015172	crnkl1	90	86.567	ENSVVUG00000012559	CRNKL1	80	87.688	Vulpes_vulpes
ENSCVAG00000015172	crnkl1	92	85.320	ENSXETG00000009698	crnkl1	97	87.425	Xenopus_tropicalis
ENSCVAG00000015172	crnkl1	100	89.481	ENSXCOG00000000824	crnkl1	89	95.815	Xiphophorus_couchianus
ENSCVAG00000015172	crnkl1	100	91.444	ENSXMAG00000006896	crnkl1	89	97.006	Xiphophorus_maculatus