EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000015177 (Gene tree)
Gene ID: 107082549
Gene Symbol: ercc3
Alias: wu:fc25f08|xpb
Full Name: ERCC excision repair 3%2C TFIIH core complex helicase subunit
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 15833 bases
Position: chrKL652555.1:1065579-1081411
Accession: 107082549
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000012708	ResIII	PF04851.15	2.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000020031	-	2842	XM_015371301	ENSCVAP00000012708	783 (aa)	XP_015226787	UPI0007429D4E

Gene Model

Click here to download ENSCVAG00000015177's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000015177's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000015177	ercc3	100	88.041	ENSG00000163161	ERCC3	99	97.516	Homo_sapiens
ENSCVAG00000015177	ercc3	100	95.019	ENSAPOG00000014383	ercc3	100	95.019	Acanthochromis_polyacanthus
ENSCVAG00000015177	ercc3	100	87.786	ENSAMEG00000016840	ERCC3	96	89.446	Ailuropoda_melanoleuca
ENSCVAG00000015177	ercc3	99	94.323	ENSACIG00000000126	ercc3	99	94.278	Amphilophus_citrinellus
ENSCVAG00000015177	ercc3	100	95.147	ENSAOCG00000009396	ercc3	100	95.147	Amphiprion_ocellaris
ENSCVAG00000015177	ercc3	100	95.147	ENSAPEG00000023077	ercc3	100	95.147	Amphiprion_percula
ENSCVAG00000015177	ercc3	100	94.508	ENSATEG00000014860	ercc3	100	94.508	Anabas_testudineus
ENSCVAG00000015177	ercc3	91	88.186	ENSAPLG00000012068	ERCC3	98	88.045	Anas_platyrhynchos
ENSCVAG00000015177	ercc3	92	89.058	ENSACAG00000009919	ERCC3	100	89.058	Anolis_carolinensis
ENSCVAG00000015177	ercc3	100	87.913	ENSANAG00000031091	ERCC3	100	87.659	Aotus_nancymaae
ENSCVAG00000015177	ercc3	100	94.381	ENSACLG00000022508	ercc3	100	94.381	Astatotilapia_calliptera
ENSCVAG00000015177	ercc3	100	92.082	ENSAMXG00000036947	ercc3	100	92.082	Astyanax_mexicanus
ENSCVAG00000015177	ercc3	100	87.532	ENSBTAG00000020777	ERCC3	100	87.277	Bos_taurus
ENSCVAG00000015177	ercc3	99	62.172	WBGene00013441	xpb-1	97	63.531	Caenorhabditis_elegans
ENSCVAG00000015177	ercc3	100	88.041	ENSCJAG00000010416	ERCC3	100	87.786	Callithrix_jacchus
ENSCVAG00000015177	ercc3	97	89.182	ENSCAFG00000004497	ERCC3	100	87.755	Canis_familiaris
ENSCVAG00000015177	ercc3	97	89.182	ENSCAFG00020003495	ERCC3	100	87.755	Canis_lupus_dingo
ENSCVAG00000015177	ercc3	100	87.532	ENSCHIG00000014551	ERCC3	100	87.532	Capra_hircus
ENSCVAG00000015177	ercc3	99	87.387	ENSTSYG00000004137	ERCC3	97	88.889	Carlito_syrichta
ENSCVAG00000015177	ercc3	78	80.782	ENSCAPG00000017027	ERCC3	93	80.782	Cavia_aperea
ENSCVAG00000015177	ercc3	100	86.641	ENSCPOG00000002144	ERCC3	100	86.768	Cavia_porcellus
ENSCVAG00000015177	ercc3	100	88.041	ENSCCAG00000024421	ERCC3	100	87.786	Cebus_capucinus
ENSCVAG00000015177	ercc3	100	88.041	ENSCATG00000032313	ERCC3	100	87.786	Cercocebus_atys
ENSCVAG00000015177	ercc3	100	87.023	ENSCLAG00000002965	ERCC3	96	87.532	Chinchilla_lanigera
ENSCVAG00000015177	ercc3	100	87.913	ENSCSAG00000016827	ERCC3	100	87.659	Chlorocebus_sabaeus
ENSCVAG00000015177	ercc3	83	95.322	ENSCHOG00000007414	ERCC3	83	95.322	Choloepus_hoffmanni
ENSCVAG00000015177	ercc3	92	88.781	ENSCPBG00000013638	ERCC3	100	88.781	Chrysemys_picta_bellii
ENSCVAG00000015177	ercc3	96	70.930	ENSCING00000002867	ercc3	95	71.391	Ciona_intestinalis
ENSCVAG00000015177	ercc3	100	88.168	ENSCANG00000007094	ERCC3	100	87.913	Colobus_angolensis_palliatus
ENSCVAG00000015177	ercc3	100	88.168	ENSCGRG00001009426	Ercc3	100	88.295	Cricetulus_griseus_chok1gshd
ENSCVAG00000015177	ercc3	97	87.664	ENSCGRG00000015547	Ercc3	100	87.795	Cricetulus_griseus_crigri
ENSCVAG00000015177	ercc3	100	91.338	ENSCSEG00000016479	ercc3	100	90.955	Cynoglossus_semilaevis
ENSCVAG00000015177	ercc3	98	92.708	ENSDARG00000002402	ercc3	100	92.347	Danio_rerio
ENSCVAG00000015177	ercc3	56	93.439	ENSDNOG00000035027	ERCC3	95	93.439	Dasypus_novemcinctus
ENSCVAG00000015177	ercc3	96	89.683	ENSDORG00000004671	Ercc3	97	89.683	Dipodomys_ordii
ENSCVAG00000015177	ercc3	99	68.961	FBgn0001179	hay	94	70.735	Drosophila_melanogaster
ENSCVAG00000015177	ercc3	90	89.206	ENSETEG00000019887	ERCC3	86	89.206	Echinops_telfairi
ENSCVAG00000015177	ercc3	99	79.924	ENSEBUG00000009773	ercc3	95	82.082	Eptatretus_burgeri
ENSCVAG00000015177	ercc3	100	85.484	ENSEASG00005022466	ERCC3	93	89.495	Equus_asinus_asinus
ENSCVAG00000015177	ercc3	100	87.532	ENSECAG00000006589	ERCC3	100	87.150	Equus_caballus
ENSCVAG00000015177	ercc3	93	88.356	ENSEEUG00000001057	ERCC3	97	89.689	Erinaceus_europaeus
ENSCVAG00000015177	ercc3	100	90.064	ENSELUG00000000089	ercc3	99	89.682	Esox_lucius
ENSCVAG00000015177	ercc3	100	87.532	ENSFCAG00000006989	ERCC3	100	87.659	Felis_catus
ENSCVAG00000015177	ercc3	99	86.375	ENSFALG00000003936	ERCC3	96	87.815	Ficedula_albicollis
ENSCVAG00000015177	ercc3	100	86.387	ENSFDAG00000011924	ERCC3	96	88.228	Fukomys_damarensis
ENSCVAG00000015177	ercc3	100	96.424	ENSFHEG00000005185	ercc3	100	96.424	Fundulus_heteroclitus
ENSCVAG00000015177	ercc3	100	89.272	ENSGMOG00000018032	ercc3	99	89.272	Gadus_morhua
ENSCVAG00000015177	ercc3	96	87.533	ENSGALG00000011515	ERCC3	96	87.533	Gallus_gallus
ENSCVAG00000015177	ercc3	100	96.807	ENSGAFG00000011936	ercc3	100	96.807	Gambusia_affinis
ENSCVAG00000015177	ercc3	100	92.866	ENSGACG00000015218	ercc3	99	94.093	Gasterosteus_aculeatus
ENSCVAG00000015177	ercc3	92	88.920	ENSGAGG00000018579	ERCC3	100	88.920	Gopherus_agassizii
ENSCVAG00000015177	ercc3	100	88.041	ENSGGOG00000015255	ERCC3	100	87.786	Gorilla_gorilla
ENSCVAG00000015177	ercc3	100	94.381	ENSHBUG00000003818	ercc3	100	94.381	Haplochromis_burtoni
ENSCVAG00000015177	ercc3	100	87.294	ENSHGLG00000011014	ERCC3	100	87.421	Heterocephalus_glaber_female
ENSCVAG00000015177	ercc3	100	87.294	ENSHGLG00100013806	ERCC3	100	87.421	Heterocephalus_glaber_male
ENSCVAG00000015177	ercc3	100	91.826	ENSHCOG00000016924	ercc3	100	91.826	Hippocampus_comes
ENSCVAG00000015177	ercc3	100	90.932	ENSIPUG00000021000	ercc3	98	91.525	Ictalurus_punctatus
ENSCVAG00000015177	ercc3	100	87.150	ENSSTOG00000011001	ERCC3	100	87.405	Ictidomys_tridecemlineatus
ENSCVAG00000015177	ercc3	90	88.293	ENSJJAG00000001117	Ercc3	100	88.293	Jaculus_jaculus
ENSCVAG00000015177	ercc3	100	94.636	ENSKMAG00000021764	ercc3	100	94.636	Kryptolebias_marmoratus
ENSCVAG00000015177	ercc3	100	93.231	ENSLBEG00000000468	ercc3	100	93.231	Labrus_bergylta
ENSCVAG00000015177	ercc3	96	84.094	ENSLACG00000014815	ERCC3	96	84.094	Latimeria_chalumnae
ENSCVAG00000015177	ercc3	90	88.418	ENSLOCG00000010907	ercc3	87	88.418	Lepisosteus_oculatus
ENSCVAG00000015177	ercc3	100	87.405	ENSLAFG00000014866	ERCC3	100	87.532	Loxodonta_africana
ENSCVAG00000015177	ercc3	100	88.041	ENSMFAG00000003370	ERCC3	100	87.786	Macaca_fascicularis
ENSCVAG00000015177	ercc3	100	84.296	ENSMNEG00000004215	ERCC3	100	84.045	Macaca_nemestrina
ENSCVAG00000015177	ercc3	100	88.041	ENSMLEG00000042061	ERCC3	100	87.786	Mandrillus_leucophaeus
ENSCVAG00000015177	ercc3	100	93.870	ENSMAMG00000004505	ercc3	99	93.870	Mastacembelus_armatus
ENSCVAG00000015177	ercc3	100	94.381	ENSMZEG00005004854	ercc3	100	94.381	Maylandia_zebra
ENSCVAG00000015177	ercc3	90	88.277	ENSMGAG00000011706	ERCC3	100	88.277	Meleagris_gallopavo
ENSCVAG00000015177	ercc3	100	87.294	ENSMAUG00000004515	Ercc3	100	87.421	Mesocricetus_auratus
ENSCVAG00000015177	ercc3	100	87.277	ENSMICG00000009578	ERCC3	100	87.405	Microcebus_murinus
ENSCVAG00000015177	ercc3	100	87.913	ENSMOCG00000021767	Ercc3	100	88.041	Microtus_ochrogaster
ENSCVAG00000015177	ercc3	99	92.506	ENSMMOG00000018174	ercc3	98	92.839	Mola_mola
ENSCVAG00000015177	ercc3	96	89.418	ENSMODG00000018695	ERCC3	96	89.418	Monodelphis_domestica
ENSCVAG00000015177	ercc3	100	93.487	ENSMALG00000014944	ercc3	100	92.848	Monopterus_albus
ENSCVAG00000015177	ercc3	100	88.168	MGP_CAROLIEiJ_G0022075	Ercc3	100	88.295	Mus_caroli
ENSCVAG00000015177	ercc3	100	87.659	ENSMUSG00000024382	Ercc3	100	87.786	Mus_musculus
ENSCVAG00000015177	ercc3	100	87.913	MGP_PahariEiJ_G0018809	Ercc3	100	88.041	Mus_pahari
ENSCVAG00000015177	ercc3	100	87.405	MGP_SPRETEiJ_G0022987	Ercc3	100	87.532	Mus_spretus
ENSCVAG00000015177	ercc3	100	87.659	ENSMPUG00000012021	ERCC3	100	87.786	Mustela_putorius_furo
ENSCVAG00000015177	ercc3	93	85.342	ENSMLUG00000007429	ERCC3	99	85.342	Myotis_lucifugus
ENSCVAG00000015177	ercc3	97	86.911	ENSNGAG00000019598	Ercc3	99	89.688	Nannospalax_galili
ENSCVAG00000015177	ercc3	100	94.381	ENSNBRG00000019074	ercc3	100	94.381	Neolamprologus_brichardi
ENSCVAG00000015177	ercc3	92	87.500	ENSNLEG00000015665	ERCC3	97	87.500	Nomascus_leucogenys
ENSCVAG00000015177	ercc3	100	86.132	ENSOPRG00000004553	ERCC3	96	87.302	Ochotona_princeps
ENSCVAG00000015177	ercc3	100	87.405	ENSODEG00000005795	ERCC3	100	87.913	Octodon_degus
ENSCVAG00000015177	ercc3	100	94.253	ENSONIG00000003255	ercc3	100	94.253	Oreochromis_niloticus
ENSCVAG00000015177	ercc3	100	87.405	ENSOCUG00000002248	ERCC3	100	87.532	Oryctolagus_cuniculus
ENSCVAG00000015177	ercc3	100	92.976	ENSORLG00000004393	ercc3	100	92.976	Oryzias_latipes
ENSCVAG00000015177	ercc3	100	92.857	ENSORLG00020017718	ercc3	100	92.730	Oryzias_latipes_hni
ENSCVAG00000015177	ercc3	100	93.103	ENSORLG00015015695	ercc3	100	93.103	Oryzias_latipes_hsok
ENSCVAG00000015177	ercc3	100	93.742	ENSOMEG00000015374	ercc3	100	93.742	Oryzias_melastigma
ENSCVAG00000015177	ercc3	100	87.437	ENSOGAG00000009103	ERCC3	100	87.563	Otolemur_garnettii
ENSCVAG00000015177	ercc3	100	87.405	ENSOARG00000016147	ERCC3	100	87.405	Ovis_aries
ENSCVAG00000015177	ercc3	100	88.041	ENSPPAG00000036166	ERCC3	100	87.786	Pan_paniscus
ENSCVAG00000015177	ercc3	100	87.659	ENSPPRG00000001305	ERCC3	100	87.786	Panthera_pardus
ENSCVAG00000015177	ercc3	92	89.751	ENSPTIG00000016969	ERCC3	100	89.751	Panthera_tigris_altaica
ENSCVAG00000015177	ercc3	100	88.041	ENSPTRG00000046940	ERCC3	100	87.786	Pan_troglodytes
ENSCVAG00000015177	ercc3	100	88.041	ENSPANG00000007699	ERCC3	100	87.786	Papio_anubis
ENSCVAG00000015177	ercc3	100	90.051	ENSPKIG00000001319	ercc3	99	91.391	Paramormyrops_kingsleyae
ENSCVAG00000015177	ercc3	92	88.643	ENSPSIG00000014682	ERCC3	100	88.643	Pelodiscus_sinensis
ENSCVAG00000015177	ercc3	96	93.907	ENSPMGG00000017885	ercc3	99	92.848	Periophthalmus_magnuspinnatus
ENSCVAG00000015177	ercc3	100	88.295	ENSPEMG00000013733	Ercc3	100	88.422	Peromyscus_maniculatus_bairdii
ENSCVAG00000015177	ercc3	90	78.852	ENSPMAG00000005081	ercc3	99	78.852	Petromyzon_marinus
ENSCVAG00000015177	ercc3	100	88.138	ENSPCIG00000011821	ERCC3	96	89.683	Phascolarctos_cinereus
ENSCVAG00000015177	ercc3	100	97.190	ENSPFOG00000015604	ercc3	100	97.190	Poecilia_formosa
ENSCVAG00000015177	ercc3	98	94.935	ENSPLAG00000022245	ercc3	100	97.642	Poecilia_latipinna
ENSCVAG00000015177	ercc3	100	97.190	ENSPMEG00000016987	ercc3	100	97.190	Poecilia_mexicana
ENSCVAG00000015177	ercc3	100	97.063	ENSPREG00000020921	ercc3	100	97.063	Poecilia_reticulata
ENSCVAG00000015177	ercc3	100	87.294	ENSPPYG00000012769	ERCC3	100	87.039	Pongo_abelii
ENSCVAG00000015177	ercc3	100	87.786	ENSPCOG00000024903	ERCC3	100	87.786	Propithecus_coquereli
ENSCVAG00000015177	ercc3	90	88.372	ENSPVAG00000013774	ERCC3	90	88.372	Pteropus_vampyrus
ENSCVAG00000015177	ercc3	100	94.381	ENSPNYG00000001208	ercc3	100	94.381	Pundamilia_nyererei
ENSCVAG00000015177	ercc3	100	91.837	ENSPNAG00000005748	ercc3	100	91.837	Pygocentrus_nattereri
ENSCVAG00000015177	ercc3	100	88.295	ENSRNOG00000013180	Ercc3	100	88.422	Rattus_norvegicus
ENSCVAG00000015177	ercc3	100	88.041	ENSRBIG00000027692	ERCC3	100	87.786	Rhinopithecus_bieti
ENSCVAG00000015177	ercc3	100	88.041	ENSRROG00000040673	ERCC3	100	87.786	Rhinopithecus_roxellana
ENSCVAG00000015177	ercc3	92	56.480	YIL143C	SSL2	85	56.344	Saccharomyces_cerevisiae
ENSCVAG00000015177	ercc3	100	87.659	ENSSBOG00000023079	ERCC3	100	87.405	Saimiri_boliviensis_boliviensis
ENSCVAG00000015177	ercc3	96	89.550	ENSSHAG00000007423	ERCC3	96	89.550	Sarcophilus_harrisii
ENSCVAG00000015177	ercc3	96	90.596	ENSSFOG00015012753	ercc3	96	90.596	Scleropages_formosus
ENSCVAG00000015177	ercc3	100	92.621	ENSSMAG00000011915	ercc3	96	93.651	Scophthalmus_maximus
ENSCVAG00000015177	ercc3	100	94.253	ENSSDUG00000021181	ercc3	100	94.253	Seriola_dumerili
ENSCVAG00000015177	ercc3	100	94.508	ENSSLDG00000008744	ercc3	98	94.508	Seriola_lalandi_dorsalis
ENSCVAG00000015177	ercc3	55	80.460	ENSSARG00000000751	-	85	80.460	Sorex_araneus
ENSCVAG00000015177	ercc3	90	87.429	ENSSPUG00000015183	ERCC3	91	87.429	Sphenodon_punctatus
ENSCVAG00000015177	ercc3	100	95.147	ENSSPAG00000004748	ercc3	100	95.147	Stegastes_partitus
ENSCVAG00000015177	ercc3	100	87.405	ENSSSCG00000015721	ERCC3	100	89.348	Sus_scrofa
ENSCVAG00000015177	ercc3	99	87.629	ENSTGUG00000004920	-	97	89.523	Taeniopygia_guttata
ENSCVAG00000015177	ercc3	100	91.954	ENSTRUG00000017185	ercc3	97	92.980	Takifugu_rubripes
ENSCVAG00000015177	ercc3	97	90.170	ENSTNIG00000005457	ercc3	99	90.728	Tetraodon_nigroviridis
ENSCVAG00000015177	ercc3	80	88.871	ENSTBEG00000009381	ERCC3	81	88.871	Tupaia_belangeri
ENSCVAG00000015177	ercc3	68	93.774	ENSUAMG00000009589	-	100	93.774	Ursus_americanus
ENSCVAG00000015177	ercc3	100	87.437	ENSUMAG00000008361	ERCC3	96	88.947	Ursus_maritimus
ENSCVAG00000015177	ercc3	92	89.612	ENSVVUG00000010431	ERCC3	100	89.612	Vulpes_vulpes
ENSCVAG00000015177	ercc3	100	86.565	ENSXETG00000033646	ercc3	100	86.439	Xenopus_tropicalis
ENSCVAG00000015177	ercc3	99	96.516	ENSXCOG00000001791	ercc3	99	96.516	Xiphophorus_couchianus
ENSCVAG00000015177	ercc3	100	97.190	ENSXMAG00000003641	ercc3	100	97.190	Xiphophorus_maculatus